RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 LINC00477Q96M19 166 aa6.44□□□□□ -1.38
SNX17-207ENST00000489402 UQCC1Q9NVA1 299 aa6.44□□□□□ -1.38
SNX17-207ENST00000489402 PRELID1Q9Y255 219 aa6.44□□□□□ -1.38
SNX17-207ENST00000489402 LSM5Q9Y4Y9 91 aaKnown RBP6.44□□□□□ -1.38
SNX17-207ENST00000489402 ICOSQ9Y6W8 199 aa6.44□□□□□ -1.38
SNX17-207ENST00000489402 TRAV5A0A0B4J249 113 aa6.43□□□□□ -1.38
SNX17-207ENST00000489402 FAM25EA8MYX2 175 aa6.43□□□□□ -1.38
SNX17-207ENST00000489402 PAX4O43316 350 aa6.43□□□□□ -1.38
SNX17-207ENST00000489402 NXPH4O95158 308 aa6.43□□□□□ -1.38
SNX17-207ENST00000489402 PVALBP20472 110 aaPredicted RBP6.43□□□□□ -1.38
SNX17-207ENST00000489402 BAXQ07812 192 aa6.43□□□□□ -1.38
SNX17-207ENST00000489402 BAK1Q16611 211 aa6.43□□□□□ -1.38
SNX17-207ENST00000489402 CDPF1Q6NVV7 123 aa6.43□□□□□ -1.38
SNX17-207ENST00000489402 C11orf72Q8NBR9 251 aa6.43□□□□□ -1.38
SNX17-207ENST00000489402 LINC00467Q9BRT7 94 aa6.43□□□□□ -1.38
SNX17-207ENST00000489402 C20orf85Q9H1P6 137 aa6.43□□□□□ -1.38
SNX17-207ENST00000489402 AAMDCQ9H7C9 122 aa6.43□□□□□ -1.38
SNX17-207ENST00000489402 SLC39A9Q9NUM3 307 aa6.43□□□□□ -1.38
SNX17-207ENST00000489402 TIMM9Q9Y5J7 89 aa6.43□□□□□ -1.38
SNX17-207ENST00000489402 TRBV19A0A075B6N1 114 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 UBE2L5PA0A1B0GUS4 154 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 C5orf51A6NDU8 294 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 KLLNB2CW77 178 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 M0R3E3 92 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 CCSO14618 274 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 RGS13O14921 159 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 MPDU1O75352 247 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 CST7O76096 145 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 GPX1P07203 203 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 HIST1H1EP10412 219 aaKnown RBP6.42□□□□□ -1.38
SNX17-207ENST00000489402 RNASE4P34096 147 aaKnown RBP6.42□□□□□ -1.38
SNX17-207ENST00000489402 RPL29P47914 159 aaKnown RBP6.42□□□□□ -1.38
SNX17-207ENST00000489402 TCL1AP56279 114 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 ERCC8Q13216 396 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 SLAQ13239 276 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 BTN1A1Q13410 526 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 PDE6HQ13956 83 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 ANXA2RQ3ZCQ2 193 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 IBA57Q5T440 356 aaKnown RBP6.42□□□□□ -1.38
SNX17-207ENST00000489402 Q6ZRN7 208 aaPredicted RBP6.42□□□□□ -1.38
SNX17-207ENST00000489402 NFE4Q86UQ8 179 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 ST6GAL2Q96JF0 529 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 WDR83OSQ9Y284 106 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 KLF12Q9Y4X4 402 aa6.42□□□□□ -1.38
SNX17-207ENST00000489402 MYCBP2O75592 4640 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 DNAH8Q96JB1 4490 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 TRAV9-2A0A087WT02 112 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 FAM24AA6NFZ4 105 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 SPINK4O60575 86 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 ZNF324O75467 553 aaPredicted RBP6.41□□□□□ -1.38
SNX17-207ENST00000489402 IFNA5P01569 189 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 NMBP08949 121 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 S100A11P31949 105 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 BTCP35070 178 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 HBG1P69891 147 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 HBG2P69892 147 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 CD300CQ08708 224 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 MRPL23Q16540 153 aaKnown RBP6.41□□□□□ -1.38
SNX17-207ENST00000489402 TMEM78Q5T7P6 136 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 Q6ZQT7 251 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 STX12Q86Y82 276 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 BLNKQ8WV28 456 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 ARPC5LQ9BPX5 153 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 AGPAT4-IT1Q9H0P7 198 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 TMEM14CQ9P0S9 112 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 PRO0255Q9UI72 69 aa6.41□□□□□ -1.38
SNX17-207ENST00000489402 NDUFB4O95168 129 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 IGHV3-53P01767 116 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 INAFM2P0DMQ5 153 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 IL7P13232 177 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 CRISP2P16562 243 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 FGF7P21781 194 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 SULT1A1P50225 295 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 S100A10P60903 97 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 IFITM3Q01628 133 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 ZNF415Q09FC8 603 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 VWC2Q2TAL6 325 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 C9orf47Q6ZRZ4 202 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 NEGR1Q7Z3B1 354 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 LYPD1Q8N2G4 141 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 EXOC3-AS1Q8N2X6 119 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 FRZBQ92765 325 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 FAM19A4Q96LR4 140 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 SDHCQ99643 169 aaPredicted RBP6.4□□□□□ -1.38
SNX17-207ENST00000489402 VGLL1Q99990 258 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 MRPL16Q9NX20 251 aaKnown RBP6.4□□□□□ -1.38
SNX17-207ENST00000489402 TNFRSF18Q9Y5U5 241 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 LY96Q9Y6Y9 160 aa6.4□□□□□ -1.38
SNX17-207ENST00000489402 IGHV1OR15-1A0A075B7D0 117 aa6.39□□□□□ -1.39
SNX17-207ENST00000489402 IGKV2-40A0A087WW87 121 aaPredicted RBP6.39□□□□□ -1.39
SNX17-207ENST00000489402 A0A1B0GVG6 124 aa6.39□□□□□ -1.39
SNX17-207ENST00000489402 K7EP13 123 aa6.39□□□□□ -1.39
SNX17-207ENST00000489402 IGKV2D-40P01614 121 aaPredicted RBP6.39□□□□□ -1.39
SNX17-207ENST00000489402 PYYP10082 97 aa6.39□□□□□ -1.39
SNX17-207ENST00000489402 CRYBA4P53673 196 aa6.39□□□□□ -1.39
SNX17-207ENST00000489402 ICAM4Q14773 271 aa6.39□□□□□ -1.39
SNX17-207ENST00000489402 ATP6V1FQ16864 119 aa6.39□□□□□ -1.39
SNX17-207ENST00000489402 FAM122CQ6P4D5 195 aa6.39□□□□□ -1.39
SNX17-207ENST00000489402 Q6ZNX1 250 aa6.39□□□□□ -1.39
SNX17-207ENST00000489402 CHAC2Q8WUX2 184 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms