RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 NDUFA3O95167 84 aa16.65■□□□□ 0.26
NSMCE4A-211ENST00000489266 LGALS1P09382 135 aaKnown RBP16.65■□□□□ 0.26
NSMCE4A-211ENST00000489266 Q8N8P6 123 aa16.65■□□□□ 0.26
NSMCE4A-211ENST00000489266 C1orf162Q8NEQ5 155 aaPredicted RBP16.65■□□□□ 0.26
NSMCE4A-211ENST00000489266 K7EM74 188 aa16.64■□□□□ 0.25
NSMCE4A-211ENST00000489266 CFIP05156 583 aa16.64■□□□□ 0.25
NSMCE4A-211ENST00000489266 IGLC6P0CF74 106 aa16.64■□□□□ 0.25
NSMCE4A-211ENST00000489266 IFITM1P13164 125 aa16.64■□□□□ 0.25
NSMCE4A-211ENST00000489266 MYOZ3Q8TDC0 251 aa16.64■□□□□ 0.25
NSMCE4A-211ENST00000489266 GAFA1Q96PS6 74 aa16.64■□□□□ 0.25
NSMCE4A-211ENST00000489266 DMDP11532 3685 aa16.64■□□□□ 0.25
NSMCE4A-211ENST00000489266 TCL1BO95988 128 aa16.64■□□□□ 0.25
NSMCE4A-211ENST00000489266 MSMPQ1L6U9 139 aa16.64■□□□□ 0.25
NSMCE4A-211ENST00000489266 MAFAQ8NHW3 353 aaPredicted RBP16.64■□□□□ 0.25
NSMCE4A-211ENST00000489266 MSRB1Q9NZV6 116 aa16.64■□□□□ 0.25
NSMCE4A-211ENST00000489266 PLXNB1O43157 2135 aa16.63■□□□□ 0.25
NSMCE4A-211ENST00000489266 IGLV2-18A0A075B6J9 118 aa16.63■□□□□ 0.25
NSMCE4A-211ENST00000489266 IGHV1-18A0A0C4DH31 117 aa16.63■□□□□ 0.25
NSMCE4A-211ENST00000489266 M0R3E3 92 aa16.63■□□□□ 0.25
NSMCE4A-211ENST00000489266 ARL3P36405 182 aa16.63■□□□□ 0.25
NSMCE4A-211ENST00000489266 TTC32Q5I0X7 151 aa16.63■□□□□ 0.25
NSMCE4A-211ENST00000489266 SCNM1Q9BWG6 230 aa16.63■□□□□ 0.25
NSMCE4A-211ENST00000489266 TRAV4A0A0B4J268 109 aa16.63■□□□□ 0.25
NSMCE4A-211ENST00000489266 SNCGO76070 127 aa16.63■□□□□ 0.25
NSMCE4A-211ENST00000489266 EGR2P11161 476 aaPredicted RBP16.63■□□□□ 0.25
NSMCE4A-211ENST00000489266 ASIPP42127 132 aa16.63■□□□□ 0.25
NSMCE4A-211ENST00000489266 TPSG1Q9NRR2 321 aa16.62■□□□□ 0.25
NSMCE4A-211ENST00000489266 DKK4Q9UBT3 224 aa16.62■□□□□ 0.25
NSMCE4A-211ENST00000489266 PRTN3P24158 256 aa16.62■□□□□ 0.25
NSMCE4A-211ENST00000489266 Q6Q795 121 aa16.62■□□□□ 0.25
NSMCE4A-211ENST00000489266 MDS2Q8NDY4 140 aa16.62■□□□□ 0.25
NSMCE4A-211ENST00000489266 GATA1P15976 413 aaPredicted RBP16.61■□□□□ 0.25
NSMCE4A-211ENST00000489266 MRGPRG-AS1Q2M3A8 158 aa16.61■□□□□ 0.25
NSMCE4A-211ENST00000489266 CCL13Q99616 98 aa16.61■□□□□ 0.25
NSMCE4A-211ENST00000489266 VMA21Q3ZAQ7 101 aa16.6■□□□□ 0.25
NSMCE4A-211ENST00000489266 RNF7Q9UBF6 113 aa16.6■□□□□ 0.25
NSMCE4A-211ENST00000489266 H3BVH4 76 aa16.6■□□□□ 0.25
NSMCE4A-211ENST00000489266 TMEM78Q5T7P6 136 aa16.6■□□□□ 0.25
NSMCE4A-211ENST00000489266 COX8CQ7Z4L0 72 aa16.6■□□□□ 0.25
NSMCE4A-211ENST00000489266 SHANK2-AS3Q9BTD1 123 aa16.6■□□□□ 0.25
NSMCE4A-211ENST00000489266 SPANXA1Q9NS26 97 aa16.6■□□□□ 0.25
NSMCE4A-211ENST00000489266 PROCRQ9UNN8 238 aa16.6■□□□□ 0.25
NSMCE4A-211ENST00000489266 FREM2Q5SZK8 3169 aa16.6■□□□□ 0.25
NSMCE4A-211ENST00000489266 RAI1Q7Z5J4 1906 aaPredicted RBP16.59■□□□□ 0.25
NSMCE4A-211ENST00000489266 PATE3B3GLJ2 98 aa16.59■□□□□ 0.25
NSMCE4A-211ENST00000489266 CRLF1O75462 422 aa16.59■□□□□ 0.25
NSMCE4A-211ENST00000489266 PPP1R27Q86WC6 154 aa16.59■□□□□ 0.25
NSMCE4A-211ENST00000489266 FAM216BQ8N7L0 139 aa16.59■□□□□ 0.25
NSMCE4A-211ENST00000489266 CD7P09564 240 aa16.59■□□□□ 0.25
NSMCE4A-211ENST00000489266 GATA4P43694 442 aa16.59■□□□□ 0.25
NSMCE4A-211ENST00000489266 CNFNQ9BYD5 112 aa16.59■□□□□ 0.25
NSMCE4A-211ENST00000489266 INTS1Q8N201 2190 aaKnown RBP16.59■□□□□ 0.25
NSMCE4A-211ENST00000489266 F8VRH5 84 aa16.58■□□□□ 0.25
NSMCE4A-211ENST00000489266 SPRY3O43610 288 aa16.58■□□□□ 0.25
NSMCE4A-211ENST00000489266 CEACAM4O75871 244 aa16.58■□□□□ 0.25
NSMCE4A-211ENST00000489266 FAM159AQ6UWV7 190 aa16.58■□□□□ 0.25
NSMCE4A-211ENST00000489266 ZNF575Q86XF7 245 aa16.58■□□□□ 0.25
NSMCE4A-211ENST00000489266 DEFB108BQ8NET1 73 aa16.58■□□□□ 0.25
NSMCE4A-211ENST00000489266 H7C1H1 209 aa16.58■□□□□ 0.24
NSMCE4A-211ENST00000489266 IGHG4P01861 327 aa16.58■□□□□ 0.24
NSMCE4A-211ENST00000489266 CNEP1R1Q8N9A8 125 aa16.58■□□□□ 0.24
NSMCE4A-211ENST00000489266 OR11H6Q8NGC7 330 aa16.58■□□□□ 0.24
NSMCE4A-211ENST00000489266 H3BRN7 92 aa16.57■□□□□ 0.24
NSMCE4A-211ENST00000489266 FCN3O75636 299 aa16.57■□□□□ 0.24
NSMCE4A-211ENST00000489266 LAGE3Q14657 143 aa16.57■□□□□ 0.24
NSMCE4A-211ENST00000489266 TRAV12-1A0A0B4J245 112 aa16.57■□□□□ 0.24
NSMCE4A-211ENST00000489266 PLGLAQ15195 96 aa16.57■□□□□ 0.24
NSMCE4A-211ENST00000489266 RASL11BQ9BPW5 248 aa16.57■□□□□ 0.24
NSMCE4A-211ENST00000489266 MRPS12O15235 138 aaKnown RBP16.56■□□□□ 0.24
NSMCE4A-211ENST00000489266 APELAP0DMC3 54 aa16.56■□□□□ 0.24
NSMCE4A-211ENST00000489266 TRAV8-2A0A0B4J237 113 aa16.56■□□□□ 0.24
NSMCE4A-211ENST00000489266 NDUFA11Q86Y39 141 aa16.56■□□□□ 0.24
NSMCE4A-211ENST00000489266 YAE1D1Q9NRH1 226 aa16.56■□□□□ 0.24
NSMCE4A-211ENST00000489266 RAXQ9Y2V3 346 aa16.55■□□□□ 0.24
NSMCE4A-211ENST00000489266 M0QXV9 152 aa16.55■□□□□ 0.24
NSMCE4A-211ENST00000489266 SCGB1C2P0DMR2 95 aa16.55■□□□□ 0.24
NSMCE4A-211ENST00000489266 CD40P25942 277 aa16.55■□□□□ 0.24
NSMCE4A-211ENST00000489266 RPL27AP46776 148 aaKnown RBP16.55■□□□□ 0.24
NSMCE4A-211ENST00000489266 EFNA4P52798 201 aa16.55■□□□□ 0.24
NSMCE4A-211ENST00000489266 SRSF9Q13242 221 aaKnown RBP eCLIP16.55■□□□□ 0.24
NSMCE4A-211ENST00000489266 PRR25Q96S07 402 aa16.55■□□□□ 0.24
NSMCE4A-211ENST00000489266 VPREB3Q9UKI3 123 aa16.55■□□□□ 0.24
NSMCE4A-211ENST00000489266 MUC3AQ02505 3323 aa16.54■□□□□ 0.24
NSMCE4A-211ENST00000489266 ZNF80P51504 273 aaPredicted RBP16.54■□□□□ 0.24
NSMCE4A-211ENST00000489266 PSMG3-AS1Q96PY0 264 aa16.54■□□□□ 0.24
NSMCE4A-211ENST00000489266 SPRY4Q9C004 299 aa16.54■□□□□ 0.24
NSMCE4A-211ENST00000489266 AAMDCQ9H7C9 122 aa16.54■□□□□ 0.24
NSMCE4A-211ENST00000489266 DTX2Q86UW9 622 aa16.53■□□□□ 0.24
NSMCE4A-211ENST00000489266 PRR30Q53SZ7 412 aaPredicted RBP16.53■□□□□ 0.24
NSMCE4A-211ENST00000489266 PLEKHB2Q96CS7 222 aa16.53■□□□□ 0.24
NSMCE4A-211ENST00000489266 ZNF815PA8K554 130 aa16.52■□□□□ 0.24
NSMCE4A-211ENST00000489266 IGKV1-17P01599 117 aa16.52■□□□□ 0.24
NSMCE4A-211ENST00000489266 PRADC1Q9BSG0 188 aa16.52■□□□□ 0.24
NSMCE4A-211ENST00000489266 CTSZQ9UBR2 303 aa16.52■□□□□ 0.24
NSMCE4A-211ENST00000489266 ZDBF2Q9HCK1 2354 aa16.52■□□□□ 0.24
NSMCE4A-211ENST00000489266 SLC25A20O43772 301 aa16.52■□□□□ 0.23
NSMCE4A-211ENST00000489266 TGFAP01135 160 aa16.52■□□□□ 0.23
NSMCE4A-211ENST00000489266 WT1P19544 449 aaPredicted RBP16.52■□□□□ 0.23
NSMCE4A-211ENST00000489266 SRSF2Q01130 221 aaKnown RBP16.52■□□□□ 0.23
NSMCE4A-211ENST00000489266 SCGB1D4Q6XE38 83 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms