RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 CTDSP1Q9GZU7 261 aa7.54□□□□□ -1.2
USP11-211ENST00000489111 SMCO4Q9NRQ5 59 aa7.54□□□□□ -1.2
USP11-211ENST00000489111 IGLV2-8P01709 118 aa7.53□□□□□ -1.2
USP11-211ENST00000489111 ZNF138P52744 262 aa7.53□□□□□ -1.2
USP11-211ENST00000489111 HIST1H1AQ02539 215 aaPredicted RBP7.53□□□□□ -1.2
USP11-211ENST00000489111 ERCC8Q13216 396 aa7.53□□□□□ -1.2
USP11-211ENST00000489111 OR5I1Q13606 314 aa7.53□□□□□ -1.2
USP11-211ENST00000489111 PRIMA1Q86XR5 153 aa7.53□□□□□ -1.2
USP11-211ENST00000489111 TMEM183AQ8IXX5 376 aa7.53□□□□□ -1.2
USP11-211ENST00000489111 LINC00482Q8N8I6 264 aa7.53□□□□□ -1.2
USP11-211ENST00000489111 OR10G8Q8NGN5 311 aa7.53□□□□□ -1.2
USP11-211ENST00000489111 Q8TAT8 98 aa7.53□□□□□ -1.2
USP11-211ENST00000489111 TMEM158Q8WZ71 300 aa7.53□□□□□ -1.2
USP11-211ENST00000489111 ANAPC16Q96DE5 110 aa7.53□□□□□ -1.2
USP11-211ENST00000489111 SPAG8Q99932 426 aaPredicted RBP7.53□□□□□ -1.2
USP11-211ENST00000489111 JMJD1CQ15652 2540 aa7.53□□□□□ -1.2
USP11-211ENST00000489111 NPIPB6E9PJ23 425 aa7.52□□□□□ -1.21
USP11-211ENST00000489111 GCGP01275 180 aa7.52□□□□□ -1.21
USP11-211ENST00000489111 S100PP25815 95 aa7.52□□□□□ -1.21
USP11-211ENST00000489111 EBLN2Q6P2I7 272 aa7.52□□□□□ -1.21
USP11-211ENST00000489111 C12orf54Q6X4T0 127 aa7.52□□□□□ -1.21
USP11-211ENST00000489111 FAM24BQ8N5W8 94 aa7.52□□□□□ -1.21
USP11-211ENST00000489111 C3orf56Q8N813 242 aa7.52□□□□□ -1.21
USP11-211ENST00000489111 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.52□□□□□ -1.21
USP11-211ENST00000489111 OR8A1Q8NGG7 326 aa7.52□□□□□ -1.21
USP11-211ENST00000489111 OR2K2Q8NGT1 345 aa7.52□□□□□ -1.21
USP11-211ENST00000489111 DAZAP1Q96EP5 407 aaKnown RBP7.52□□□□□ -1.21
USP11-211ENST00000489111 NIPBLQ6KC79 2804 aaeCLIP7.51□□□□□ -1.21
USP11-211ENST00000489111 CXorf65A6NEN9 183 aa7.51□□□□□ -1.21
USP11-211ENST00000489111 IBA57Q5T440 356 aaKnown RBP7.51□□□□□ -1.21
USP11-211ENST00000489111 C9orf47Q6ZRZ4 202 aa7.51□□□□□ -1.21
USP11-211ENST00000489111 ZC2HC1AQ96GY0 325 aa7.51□□□□□ -1.21
USP11-211ENST00000489111 LINC00477Q96M19 166 aa7.51□□□□□ -1.21
USP11-211ENST00000489111 PRR25Q96S07 402 aa7.51□□□□□ -1.21
USP11-211ENST00000489111 ASCL2Q99929 193 aa7.51□□□□□ -1.21
USP11-211ENST00000489111 ZNF747Q9BV97 191 aa7.51□□□□□ -1.21
USP11-211ENST00000489111 MLST8Q9BVC4 326 aa7.51□□□□□ -1.21
USP11-211ENST00000489111 GPR61Q9BZJ8 451 aa7.51□□□□□ -1.21
USP11-211ENST00000489111 AGPAT4-IT1Q9H0P7 198 aa7.51□□□□□ -1.21
USP11-211ENST00000489111 RNASE7Q9H1E1 156 aaKnown RBP7.51□□□□□ -1.21
USP11-211ENST00000489111 OSTCQ9NRP0 149 aa7.51□□□□□ -1.21
USP11-211ENST00000489111 TMEM242Q9NWH2 141 aa7.51□□□□□ -1.21
USP11-211ENST00000489111 PPP1R14DQ9NXH3 145 aa7.51□□□□□ -1.21
USP11-211ENST00000489111 ZNF492Q9P255 531 aa7.51□□□□□ -1.21
USP11-211ENST00000489111 CUBNO60494 3623 aa7.51□□□□□ -1.21
USP11-211ENST00000489111 TEP1Q99973 2627 aaKnown RBP7.51□□□□□ -1.21
USP11-211ENST00000489111 ZNF705GA8MUZ8 300 aaPredicted RBP7.5□□□□□ -1.21
USP11-211ENST00000489111 F6UB75 175 aa7.5□□□□□ -1.21
USP11-211ENST00000489111 GATCO43716 136 aaKnown RBP7.5□□□□□ -1.21
USP11-211ENST00000489111 DUSP14O95147 198 aaKnown RBP7.5□□□□□ -1.21
USP11-211ENST00000489111 P01737 135 aa7.5□□□□□ -1.21
USP11-211ENST00000489111 ZNF705DP0CH99 300 aaPredicted RBP7.5□□□□□ -1.21
USP11-211ENST00000489111 ZNF705BP0CI00 300 aaPredicted RBP7.5□□□□□ -1.21
USP11-211ENST00000489111 SMUG1Q53HV7 270 aa7.5□□□□□ -1.21
USP11-211ENST00000489111 FAM162BQ5T6X4 162 aa7.5□□□□□ -1.21
USP11-211ENST00000489111 KCNIP4Q6PIL6 250 aa7.5□□□□□ -1.21
USP11-211ENST00000489111 SHISA2Q6UWI4 295 aa7.5□□□□□ -1.21
USP11-211ENST00000489111 FOXI2Q6ZQN5 318 aa7.5□□□□□ -1.21
USP11-211ENST00000489111 FAM231DQ6ZW35 169 aa7.5□□□□□ -1.21
USP11-211ENST00000489111 C8orf49Q96NF6 230 aa7.5□□□□□ -1.21
USP11-211ENST00000489111 LENEPQ9Y5L5 61 aa7.5□□□□□ -1.21
USP11-211ENST00000489111 URGCP-MRPS24S4R325 110 aa7.5□□□□□ -1.21
USP11-211ENST00000489111 A0A0J9YX75 114 aa7.49□□□□□ -1.21
USP11-211ENST00000489111 IZUMO1RA6ND01 250 aa7.49□□□□□ -1.21
USP11-211ENST00000489111 IGLV1-51P01701 117 aa7.49□□□□□ -1.21
USP11-211ENST00000489111 CD33P20138 364 aa7.49□□□□□ -1.21
USP11-211ENST00000489111 DEFB131AP59861 70 aa7.49□□□□□ -1.21
USP11-211ENST00000489111 DEFB1P60022 68 aa7.49□□□□□ -1.21
USP11-211ENST00000489111 MCRIP2Q9BUT9 160 aaKnown RBP7.49□□□□□ -1.21
USP11-211ENST00000489111 RPP21Q9H633 154 aaKnown RBP7.49□□□□□ -1.21
USP11-211ENST00000489111 TUBA4BQ9H853 241 aa7.49□□□□□ -1.21
USP11-211ENST00000489111 LEPP41159 167 aa7.48□□□□□ -1.21
USP11-211ENST00000489111 INSL3P51460 131 aa7.48□□□□□ -1.21
USP11-211ENST00000489111 CMC4P56277 68 aaPredicted RBP7.48□□□□□ -1.21
USP11-211ENST00000489111 C9orf66Q5T8R8 295 aa7.48□□□□□ -1.21
USP11-211ENST00000489111 COX8CQ7Z4L0 72 aa7.48□□□□□ -1.21
USP11-211ENST00000489111 NUDT10Q8NFP7 164 aa7.48□□□□□ -1.21
USP11-211ENST00000489111 OR4B1Q8NGF8 309 aa7.48□□□□□ -1.21
USP11-211ENST00000489111 NUDT11Q96G61 164 aa7.48□□□□□ -1.21
USP11-211ENST00000489111 IMMP2LQ96T52 175 aa7.48□□□□□ -1.21
USP11-211ENST00000489111 SAV1Q9H4B6 383 aaPredicted RBP7.48□□□□□ -1.21
USP11-211ENST00000489111 MAP6D1Q9H9H5 199 aa7.48□□□□□ -1.21
USP11-211ENST00000489111 IL36BQ9NZH7 164 aa7.48□□□□□ -1.21
USP11-211ENST00000489111 V9GYV3 84 aa7.48□□□□□ -1.21
USP11-211ENST00000489111 TRBV7-9A0A0J9YWB2 115 aa7.47□□□□□ -1.21
USP11-211ENST00000489111 C19orf71A6NCJ1 209 aa7.47□□□□□ -1.21
USP11-211ENST00000489111 KNCNA6PVL3 124 aa7.47□□□□□ -1.21
USP11-211ENST00000489111 OR11H12B2RN74 326 aa7.47□□□□□ -1.21
USP11-211ENST00000489111 SH2D1AO60880 128 aa7.47□□□□□ -1.21
USP11-211ENST00000489111 TSPOP30536 169 aa7.47□□□□□ -1.21
USP11-211ENST00000489111 CT83Q5H943 113 aa7.47□□□□□ -1.21
USP11-211ENST00000489111 ACTL10Q5JWF8 245 aa7.47□□□□□ -1.21
USP11-211ENST00000489111 OR2D3Q8NGH3 330 aa7.47□□□□□ -1.21
USP11-211ENST00000489111 ODF3Q96PU9 254 aa7.47□□□□□ -1.21
USP11-211ENST00000489111 ZNF256Q9Y2P7 627 aaPredicted RBP7.47□□□□□ -1.21
USP11-211ENST00000489111 ATRQ13535 2644 aa7.47□□□□□ -1.21
USP11-211ENST00000489111 A0A1W2PPQ1 181 aa7.46□□□□□ -1.22
USP11-211ENST00000489111 XKRY2A2RUG3 117 aa7.46□□□□□ -1.22
USP11-211ENST00000489111 A8MWL6 223 aa7.46□□□□□ -1.22
USP11-211ENST00000489111 J3KRW8 73 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms