RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 COA6Q5JTJ3 125 aaKnown RBP5.81□□□□□ -1.48
NECTIN3-209ENST00000488016 LCN12Q6JVE5 192 aa5.81□□□□□ -1.48
NECTIN3-209ENST00000488016 ZNF600Q6ZNG1 722 aa5.81□□□□□ -1.48
NECTIN3-209ENST00000488016 SBSPONQ8IVN8 264 aa5.81□□□□□ -1.48
NECTIN3-209ENST00000488016 GBGT1Q8N5D6 347 aa5.81□□□□□ -1.48
NECTIN3-209ENST00000488016 OR51G1Q8NGK1 321 aa5.81□□□□□ -1.48
NECTIN3-209ENST00000488016 RNASEH2CQ8TDP1 164 aaKnown RBP5.81□□□□□ -1.48
NECTIN3-209ENST00000488016 PFDN5Q99471 154 aa5.81□□□□□ -1.48
NECTIN3-209ENST00000488016 TXN2Q99757 166 aa5.81□□□□□ -1.48
NECTIN3-209ENST00000488016 RHPN1-AS1Q9BWJ2 59 aa5.81□□□□□ -1.48
NECTIN3-209ENST00000488016 GSN-AS1Q9NRJ2 163 aa5.81□□□□□ -1.48
NECTIN3-209ENST00000488016 TMEM167BQ9NRX6 74 aa5.81□□□□□ -1.48
NECTIN3-209ENST00000488016 MRPL27Q9P0M9 148 aaKnown RBP5.81□□□□□ -1.48
NECTIN3-209ENST00000488016 SMPXQ9UHP9 88 aa5.81□□□□□ -1.48
NECTIN3-209ENST00000488016 SMAD5-AS1Q9Y6J3 95 aa5.81□□□□□ -1.48
NECTIN3-209ENST00000488016 IGKV1OR2-108A0A075B7D4 117 aa5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 C11orf94C9JXX5 98 aa5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 CORTO00230 105 aa5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 CHEK1O14757 476 aa5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 GCGP01275 180 aa5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 TRGC2P03986 189 aa5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 GALR1P47211 349 aa5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 ELLP55199 621 aaPredicted RBP5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 TAS2R45P59539 299 aa5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 RPL23P62829 140 aaKnown RBP5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 RELQ04864 619 aaPredicted RBP5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 TMEM116Q8NCL8 245 aa5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 SLC35E1Q96K37 410 aa5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 B9D2Q9BPU9 175 aa5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 VSIRQ9H7M9 311 aa5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 RETNQ9HD89 108 aa5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 TECRQ9NZ01 308 aaKnown RBP5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 RFNGQ9Y644 331 aa5.8□□□□□ -1.48
NECTIN3-209ENST00000488016 TGIF2-C20orf24A0A0A6YYL0 155 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 RBMY1BA6NDE4 496 aaKnown RBP5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 RBMY1EA6NEQ0 496 aaKnown RBP5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 HIST1H2BKO60814 126 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 PAGE4O60829 102 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 IL4P05112 153 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 HIST1H2BJP06899 126 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 CXCL1P09341 107 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 RBMY1DP0C7P1 496 aaKnown RBP5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 TRGC1P0CF51 173 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 STAG3L2P0CL84 134 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 STAG3L3P0CL85 134 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 PSG1P11464 419 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 HIST1H2BOP23527 126 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 HIST1H2BBP33778 126 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 FGF8P55075 233 aaPredicted RBP5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 HIST1H2BDP58876 126 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 HIST1H2BCP62807 126 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 ADIRFQ15847 76 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 HIST2H2BEQ16778 126 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 ODF3L2Q3SX64 289 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 RBPMS2Q6ZRY4 209 aaKnown RBP5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 TCF24Q7RTU0 167 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 TMEM144Q7Z5S9 345 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 OR2K2Q8NGT1 345 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 HIST1H2BHQ93079 126 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 ATP6V0BQ99437 205 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 HIST1H2BNQ99877 126 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 HIST1H2BMQ99879 126 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 PARLQ9H300 379 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 SLC45A2Q9UMX9 530 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 URGCP-MRPS24S4R325 110 aa5.79□□□□□ -1.48
NECTIN3-209ENST00000488016 STAB2Q8WWQ8 2551 aa5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 OR11H12B2RN74 326 aa5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 K7EMT4 169 aa5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 TOMM40O96008 361 aa5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 LYZP61626 148 aa5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 LBHQ53QV2 105 aaPredicted RBP5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 CST9LP1Q5W188 147 aa5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 ETFRF1Q6IPR1 90 aa5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 PQLC2Q6ZP29 291 aa5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 GTSCR1Q86UQ5 136 aa5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 APRG1Q8IVJ8 170 aa5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 TMEM183AQ8IXX5 376 aa5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 TMEM18Q96B42 140 aa5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 FAM110AQ9BQ89 295 aa5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 ZMAT5Q9UDW3 170 aaKnown RBP5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 PXMP4Q9Y6I8 212 aa5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 CSMD3Q7Z407 3707 aa5.78□□□□□ -1.48
NECTIN3-209ENST00000488016 C9JCJ5 164 aa5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 TSTD3H0UI37 97 aa5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 RD3LP0DJH9 198 aa5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 PRB4P10163 310 aaPredicted RBP5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 CRYBB3P26998 211 aa5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 DEFB1P60022 68 aa5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 YPEL3P61236 119 aaPredicted RBP5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 PKIAP61925 76 aa5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 SELENOTP62341 195 aa5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 PAFAH1B2P68402 229 aa5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 HIST3H2BBQ8N257 126 aa5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 THAP8Q8NA92 274 aa5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 STXBP6Q8NFX7 210 aa5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 OR10G8Q8NGN5 311 aa5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 OR10D4PQ8NGN7 298 aa5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 GATAD1Q8WUU5 269 aa5.77□□□□□ -1.49
NECTIN3-209ENST00000488016 FRZBQ92765 325 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms