RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 YTHDF2Q9Y5A9 579 aaKnown RBP5.11□□□□□ -1.59
UBE4B-209ENST00000487244 TIMM9Q9Y5J7 89 aa5.11□□□□□ -1.59
UBE4B-209ENST00000487244 IGKV2-40A0A087WW87 121 aaPredicted RBP5.1□□□□□ -1.59
UBE4B-209ENST00000487244 FXYD6-FXYD2A0A087WZ82 144 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 PLAC8L1A1L4L8 177 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 SMIM9A6NGZ8 99 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 SMLR1H3BR10 107 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 HMGB3O15347 200 aaKnown RBP5.1□□□□□ -1.59
UBE4B-209ENST00000487244 OR7C2O60412 319 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 LY6G6CO95867 125 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 IGKV2D-40P01614 121 aaPredicted RBP5.1□□□□□ -1.59
UBE4B-209ENST00000487244 HBE1P02100 147 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 AMBPP02760 352 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 NBEAP1P0C6P0 100 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 CDKN1BP46527 198 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 UBE2L3P68036 154 aaKnown RBP5.1□□□□□ -1.59
UBE4B-209ENST00000487244 PDE6HQ13956 83 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 ICAM4Q14773 271 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 RRN3P1Q2M238 152 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 GFI1BQ5VTD9 330 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 OR2T35Q8NGX2 323 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 OR10J6PQ8NGY7 276 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 SH3BGRL3Q9H299 93 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 OR51M1Q9H341 326 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 PPP1R14DQ9NXH3 145 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 DKK2Q9UBU2 259 aa5.1□□□□□ -1.59
UBE4B-209ENST00000487244 DNAH1Q9P2D7 4330 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 DEFB131BA0A096LNP1 70 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 TRAV10A0A0B4J240 114 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 IGLL5B9A064 214 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 SPART-AS1P0CW21 52 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 HTN1P15515 57 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 ATP6V0CP27449 155 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 KHDC3LQ587J8 217 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 RPL7L1Q6DKI1 246 aaKnown RBP5.09□□□□□ -1.59
UBE4B-209ENST00000487244 Q6ZQT7 251 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 Q8TAT8 98 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 C2CD4CQ8TF44 421 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 MRPL53Q96EL3 112 aaKnown RBP5.09□□□□□ -1.59
UBE4B-209ENST00000487244 LINC01587Q99440 93 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 VGLL1Q99990 258 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 AGPAT4-IT1Q9H0P7 198 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 APLNQ9ULZ1 77 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 TNFSF18Q9UNG2 199 aa5.09□□□□□ -1.59
UBE4B-209ENST00000487244 IGHV4-4A0A075B6R2 117 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 TRAV12-3A0A0B4J271 114 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 TMEM189A5PLL7 270 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 C11orf94C9JXX5 98 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 HTN3P15516 51 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 M6PRP20645 277 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 RANP62826 216 aaKnown RBP5.08□□□□□ -1.6
UBE4B-209ENST00000487244 CD300CQ08708 224 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 ACOT6Q3I5F7 207 aaPredicted RBP5.08□□□□□ -1.6
UBE4B-209ENST00000487244 PRR9Q5T870 116 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 SSX7Q7RTT5 188 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 TMEM256Q8N2U0 113 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 OR10G4Q8NGN3 311 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 OR10G9Q8NGN4 311 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 OR10G7Q8NGN6 311 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 OR2G3Q8NGZ4 309 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 RNASE8Q8TDE3 154 aaKnown RBP5.08□□□□□ -1.6
UBE4B-209ENST00000487244 ASB13Q8WXK3 278 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 FAM19A4Q96LR4 140 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 ODF3Q96PU9 254 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 NIPSNAP3BQ9BS92 247 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 Q9H3A6 140 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 AAMDCQ9H7C9 122 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 PRELID1Q9Y255 219 aa5.08□□□□□ -1.6
UBE4B-209ENST00000487244 KLLNB2CW77 178 aa5.07□□□□□ -1.6
UBE4B-209ENST00000487244 ARPC5O15511 151 aa5.07□□□□□ -1.6
UBE4B-209ENST00000487244 ARL14EPLP0DKL9 152 aa5.07□□□□□ -1.6
UBE4B-209ENST00000487244 TSPOP30536 169 aa5.07□□□□□ -1.6
UBE4B-209ENST00000487244 LEPP41159 167 aa5.07□□□□□ -1.6
UBE4B-209ENST00000487244 TAS2R45P59539 299 aa5.07□□□□□ -1.6
UBE4B-209ENST00000487244 TAS2R60P59551 318 aa5.07□□□□□ -1.6
UBE4B-209ENST00000487244 BTN1A1Q13410 526 aa5.07□□□□□ -1.6
UBE4B-209ENST00000487244 ZNF266Q14584 549 aa5.07□□□□□ -1.6
UBE4B-209ENST00000487244 C9orf47Q6ZRZ4 202 aa5.07□□□□□ -1.6
UBE4B-209ENST00000487244 ZFAND2AQ8N6M9 145 aa5.07□□□□□ -1.6
UBE4B-209ENST00000487244 INO80EQ8NBZ0 244 aaPredicted RBP5.07□□□□□ -1.6
UBE4B-209ENST00000487244 PSMG3Q9BT73 122 aaPredicted RBP5.07□□□□□ -1.6
UBE4B-209ENST00000487244 NACAE9PAV3 2078 aa5.07□□□□□ -1.6
UBE4B-209ENST00000487244 A0A1W2PPV4 95 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 C7orf71A4D174 169 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 H7BYZ3 331 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 DEFB130BP0DP73 79 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 DEFB130AP0DP74 79 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 CRISP2P16562 243 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 RNASE4P34096 147 aaKnown RBP5.06□□□□□ -1.6
UBE4B-209ENST00000487244 CDC34P49427 236 aaPredicted RBP5.06□□□□□ -1.6
UBE4B-209ENST00000487244 DAD1P61803 113 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 GNG5P63218 68 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 ZNF726P1Q15940 193 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 LGALS9CQ6DKI2 356 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 OR11H4Q8NGC9 324 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 RAB24Q969Q5 203 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 C16orf74Q96GX8 76 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 HYLS1Q96M11 299 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 NOP10Q9NPE3 64 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms