RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CT45A10P0DMU9 189 aa9.4□□□□□ -0.9
HDAC6-229ENST00000486665 IGHV4-30-4P0DP06 118 aa9.4□□□□□ -0.9
HDAC6-229ENST00000486665 RPL35AP18077 110 aaKnown RBP9.4□□□□□ -0.9
HDAC6-229ENST00000486665 TRPT1Q86TN4 253 aaKnown RBP9.4□□□□□ -0.9
HDAC6-229ENST00000486665 STHQ8IWL8 128 aa9.4□□□□□ -0.9
HDAC6-229ENST00000486665 OR4B1Q8NGF8 309 aa9.4□□□□□ -0.9
HDAC6-229ENST00000486665 OR10J6PQ8NGY7 276 aa9.4□□□□□ -0.9
HDAC6-229ENST00000486665 EIF5A2Q9GZV4 153 aaKnown RBP9.4□□□□□ -0.9
HDAC6-229ENST00000486665 RYR2Q92736 4967 aa9.4□□□□□ -0.91
HDAC6-229ENST00000486665 TRAV8-1A0A0A6YYK1 113 aa9.39□□□□□ -0.91
HDAC6-229ENST00000486665 A8MTW9 85 aa9.39□□□□□ -0.91
HDAC6-229ENST00000486665 DUSP14O95147 198 aaKnown RBP9.39□□□□□ -0.91
HDAC6-229ENST00000486665 IGLV2-11P01706 119 aa9.39□□□□□ -0.91
HDAC6-229ENST00000486665 TAGLN2P37802 199 aaKnown RBP9.39□□□□□ -0.91
HDAC6-229ENST00000486665 AMTNQ6UX39 209 aa9.39□□□□□ -0.91
HDAC6-229ENST00000486665 C9orf47Q6ZRZ4 202 aa9.39□□□□□ -0.91
HDAC6-229ENST00000486665 CYB561D1Q8N8Q1 229 aa9.39□□□□□ -0.91
HDAC6-229ENST00000486665 HIST1H2BAQ96A08 127 aa9.39□□□□□ -0.91
HDAC6-229ENST00000486665 LINC00477Q96M19 166 aa9.39□□□□□ -0.91
HDAC6-229ENST00000486665 TXNDC17Q9BRA2 123 aa9.39□□□□□ -0.91
HDAC6-229ENST00000486665 ATG101Q9BSB4 218 aa9.39□□□□□ -0.91
HDAC6-229ENST00000486665 TUBA4BQ9H853 241 aa9.39□□□□□ -0.91
HDAC6-229ENST00000486665 SACSQ9NZJ4 4579 aa9.38□□□□□ -0.91
HDAC6-229ENST00000486665 RBAKDNA6NC62 111 aa9.38□□□□□ -0.91
HDAC6-229ENST00000486665 SRP19P09132 144 aaKnown RBP9.38□□□□□ -0.91
HDAC6-229ENST00000486665 FXYD7P58549 80 aa9.38□□□□□ -0.91
HDAC6-229ENST00000486665 LINC00322Q6ZN03 302 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-229ENST00000486665 Q8TAT8 98 aa9.38□□□□□ -0.91
HDAC6-229ENST00000486665 C2CD4CQ8TF44 421 aa9.38□□□□□ -0.91
HDAC6-229ENST00000486665 C11orf52Q96A22 123 aa9.38□□□□□ -0.91
HDAC6-229ENST00000486665 TCEAL7Q9BRU2 100 aa9.38□□□□□ -0.91
HDAC6-229ENST00000486665 PSG8Q9UQ74 426 aa9.38□□□□□ -0.91
HDAC6-229ENST00000486665 LYSTQ99698 3801 aa9.38□□□□□ -0.91
HDAC6-229ENST00000486665 AGRNO00468 2067 aa9.37□□□□□ -0.91
HDAC6-229ENST00000486665 SERTM2A0A1B0GWG4 89 aa9.37□□□□□ -0.91
HDAC6-229ENST00000486665 LINC00862A6NCI5 91 aa9.37□□□□□ -0.91
HDAC6-229ENST00000486665 A8MZ25 164 aa9.37□□□□□ -0.91
HDAC6-229ENST00000486665 F6UZH7 168 aa9.37□□□□□ -0.91
HDAC6-229ENST00000486665 PDE6DO43924 150 aa9.37□□□□□ -0.91
HDAC6-229ENST00000486665 ZNF138P52744 262 aa9.37□□□□□ -0.91
HDAC6-229ENST00000486665 PEA15Q15121 130 aa9.37□□□□□ -0.91
HDAC6-229ENST00000486665 TVP23CQ96ET8 276 aa9.37□□□□□ -0.91
HDAC6-229ENST00000486665 FAM19A4Q96LR4 140 aa9.37□□□□□ -0.91
HDAC6-229ENST00000486665 CLUHP3Q96NS8 147 aa9.37□□□□□ -0.91
HDAC6-229ENST00000486665 SLC35B3Q9H1N7 401 aa9.37□□□□□ -0.91
HDAC6-229ENST00000486665 MED9Q9NWA0 146 aa9.37□□□□□ -0.91
HDAC6-229ENST00000486665 ZNF492Q9P255 531 aa9.37□□□□□ -0.91
HDAC6-229ENST00000486665 KLF12Q9Y4X4 402 aa9.37□□□□□ -0.91
HDAC6-229ENST00000486665 LOC102724200A0A096LPH7 203 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-229ENST00000486665 RAB19A4D1S5 217 aa9.36□□□□□ -0.91
HDAC6-229ENST00000486665 GIG44P09565 113 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-229ENST00000486665 AKR1C3P42330 323 aa9.36□□□□□ -0.91
HDAC6-229ENST00000486665 KIR3DS1Q14943 382 aa9.36□□□□□ -0.91
HDAC6-229ENST00000486665 TMEM183BQ1AE95 376 aa9.36□□□□□ -0.91
HDAC6-229ENST00000486665 TMEM78Q5T7P6 136 aa9.36□□□□□ -0.91
HDAC6-229ENST00000486665 PRNTQ86SH4 94 aa9.36□□□□□ -0.91
HDAC6-229ENST00000486665 TMEM75Q8N9X5 138 aa9.36□□□□□ -0.91
HDAC6-229ENST00000486665 DERL1Q9BUN8 251 aa9.36□□□□□ -0.91
HDAC6-229ENST00000486665 TENM2Q9NT68 2774 aa9.36□□□□□ -0.91
HDAC6-229ENST00000486665 K7EQM0 130 aa9.35□□□□□ -0.91
HDAC6-229ENST00000486665 FRMD6-AS1P0C7T7 363 aa9.35□□□□□ -0.91
HDAC6-229ENST00000486665 RPL35P42766 123 aaKnown RBP9.35□□□□□ -0.91
HDAC6-229ENST00000486665 FLI1Q01543 452 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-229ENST00000486665 SPINK13Q1W4C9 94 aa9.35□□□□□ -0.91
HDAC6-229ENST00000486665 COMMD7Q86VX2 200 aa9.35□□□□□ -0.91
HDAC6-229ENST00000486665 PPP1R14DQ9NXH3 145 aa9.35□□□□□ -0.91
HDAC6-229ENST00000486665 CSMD3Q7Z407 3707 aa9.34□□□□□ -0.91
HDAC6-229ENST00000486665 EPPK1P58107 5090 aaKnown RBP9.34□□□□□ -0.91
HDAC6-229ENST00000486665 TRBV6-1A0A0K0K1D8 114 aa9.34□□□□□ -0.91
HDAC6-229ENST00000486665 TMEM250H0YL14 139 aa9.34□□□□□ -0.91
HDAC6-229ENST00000486665 M0R2Z0 102 aa9.34□□□□□ -0.91
HDAC6-229ENST00000486665 NDUFS6O75380 124 aaKnown RBP9.34□□□□□ -0.91
HDAC6-229ENST00000486665 CEBPGP53567 150 aa9.34□□□□□ -0.91
HDAC6-229ENST00000486665 FMC1Q96HJ9 113 aa9.34□□□□□ -0.91
HDAC6-229ENST00000486665 ODF3Q96PU9 254 aa9.34□□□□□ -0.91
HDAC6-229ENST00000486665 CSTL1Q9H114 145 aa9.34□□□□□ -0.91
HDAC6-229ENST00000486665 TREM1Q9NP99 234 aa9.34□□□□□ -0.91
HDAC6-229ENST00000486665 TRAV12-2A0A075B6T6 113 aa9.33□□□□□ -0.92
HDAC6-229ENST00000486665 J3KRW8 73 aa9.33□□□□□ -0.92
HDAC6-229ENST00000486665 CRXO43186 299 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-229ENST00000486665 S100A9P06702 114 aaKnown RBP9.33□□□□□ -0.92
HDAC6-229ENST00000486665 CRISP2P16562 243 aa9.33□□□□□ -0.92
HDAC6-229ENST00000486665 TAS2R60P59551 318 aa9.33□□□□□ -0.92
HDAC6-229ENST00000486665 UBE2G1P62253 170 aa9.33□□□□□ -0.92
HDAC6-229ENST00000486665 PRR9Q5T870 116 aa9.33□□□□□ -0.92
HDAC6-229ENST00000486665 MORN3Q6PF18 240 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-229ENST00000486665 Q86TA4 180 aa9.33□□□□□ -0.92
HDAC6-229ENST00000486665 ZFAND2AQ8N6M9 145 aa9.33□□□□□ -0.92
HDAC6-229ENST00000486665 C8orf49Q96NF6 230 aa9.33□□□□□ -0.92
HDAC6-229ENST00000486665 SMDT1Q9H4I9 107 aa9.33□□□□□ -0.92
HDAC6-229ENST00000486665 XCL2Q9UBD3 114 aa9.33□□□□□ -0.92
HDAC6-229ENST00000486665 U3KQK5 164 aa9.33□□□□□ -0.92
HDAC6-229ENST00000486665 DNAH1Q9P2D7 4330 aa9.33□□□□□ -0.92
HDAC6-229ENST00000486665 KIR2DL5BA0A0G2JN68 375 aa9.32□□□□□ -0.92
HDAC6-229ENST00000486665 KIR2DL5BA0A0G2JPC4 375 aa9.32□□□□□ -0.92
HDAC6-229ENST00000486665 FBLL1A6NHQ2 334 aaKnown RBP9.32□□□□□ -0.92
HDAC6-229ENST00000486665 CA1P00915 261 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-229ENST00000486665 LTAP01374 205 aa9.32□□□□□ -0.92
HDAC6-229ENST00000486665 LEPP41159 167 aa9.32□□□□□ -0.92
HDAC6-229ENST00000486665 ZNF674Q2M3X9 581 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms