RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 IGLV2-18A0A075B6J9 118 aa8.31□□□□□ -1.08
CCDC171-208ENST00000486641 IGHG3P01860 377 aa8.31□□□□□ -1.08
CCDC171-208ENST00000486641 LINC01559Q495D7 138 aa8.31□□□□□ -1.08
CCDC171-208ENST00000486641 Q6ZS92 163 aa8.31□□□□□ -1.08
CCDC171-208ENST00000486641 Q8N8P6 123 aa8.31□□□□□ -1.08
CCDC171-208ENST00000486641 PTH2Q96A98 100 aa8.31□□□□□ -1.08
CCDC171-208ENST00000486641 AAMDCQ9H7C9 122 aa8.31□□□□□ -1.08
CCDC171-208ENST00000486641 PGPEP1Q9NXJ5 209 aa8.31□□□□□ -1.08
CCDC171-208ENST00000486641 ASPMQ8IZT6 3477 aa8.31□□□□□ -1.08
CCDC171-208ENST00000486641 LINC01548A6NM66 108 aa8.3□□□□□ -1.08
CCDC171-208ENST00000486641 IL4P05112 153 aa8.3□□□□□ -1.08
CCDC171-208ENST00000486641 CCL8P80075 99 aa8.3□□□□□ -1.08
CCDC171-208ENST00000486641 COX8CQ7Z4L0 72 aa8.3□□□□□ -1.08
CCDC171-208ENST00000486641 Q8TAT8 98 aa8.3□□□□□ -1.08
CCDC171-208ENST00000486641 MYOZ3Q8TDC0 251 aa8.3□□□□□ -1.08
CCDC171-208ENST00000486641 RPEQ96AT9 228 aa8.3□□□□□ -1.08
CCDC171-208ENST00000486641 CARD19Q96LW7 228 aa8.3□□□□□ -1.08
CCDC171-208ENST00000486641 KALRNO60229 2985 aa8.3□□□□□ -1.08
CCDC171-208ENST00000486641 A0A087WX48 190 aa8.3□□□□□ -1.08
CCDC171-208ENST00000486641 NCBP2LA6PVI3 153 aaKnown RBP8.3□□□□□ -1.08
CCDC171-208ENST00000486641 LOC400499M0QZD8 3231 aa8.3□□□□□ -1.08
CCDC171-208ENST00000486641 PSMB2P49721 201 aa8.3□□□□□ -1.08
CCDC171-208ENST00000486641 DLX4Q92988 240 aaPredicted RBP8.3□□□□□ -1.08
CCDC171-208ENST00000486641 RNF125Q96EQ8 232 aa8.3□□□□□ -1.08
CCDC171-208ENST00000486641 PSMG3-AS1Q96PY0 264 aa8.3□□□□□ -1.08
CCDC171-208ENST00000486641 ORM1P02763 201 aa8.29□□□□□ -1.08
CCDC171-208ENST00000486641 PLGLAQ15195 96 aa8.29□□□□□ -1.08
CCDC171-208ENST00000486641 SFTA2Q6UW10 78 aa8.29□□□□□ -1.08
CCDC171-208ENST00000486641 ZFP2Q6ZN57 461 aa8.29□□□□□ -1.08
CCDC171-208ENST00000486641 PPP1R27Q86WC6 154 aa8.29□□□□□ -1.08
CCDC171-208ENST00000486641 ZZEF1O43149 2961 aa8.29□□□□□ -1.08
CCDC171-208ENST00000486641 MYMXA0A1B0GTQ4 84 aa8.29□□□□□ -1.08
CCDC171-208ENST00000486641 LYPD2Q6UXB3 125 aa8.29□□□□□ -1.08
CCDC171-208ENST00000486641 DTX2Q86UW9 622 aa8.29□□□□□ -1.08
CCDC171-208ENST00000486641 C8orf31Q8N9H6 132 aa8.29□□□□□ -1.08
CCDC171-208ENST00000486641 CTSZQ9UBR2 303 aa8.29□□□□□ -1.08
CCDC171-208ENST00000486641 PRSS29PA6NIE9 313 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 LINC01549A6NIU2 74 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 LINC01619G3V211 115 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 K7EIM0 57 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 PDE6HQ13956 83 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 CNFNQ9BYD5 112 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 FBXL15Q9H469 300 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 S4R3C0 116 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 ZNF318Q5VUA4 2279 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 LOC107984156A0A0G2JMH3 177 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 EFNA4P52798 201 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 DLX1P56177 255 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 PRB3Q04118 309 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-208ENST00000486641 LAGE3Q14657 143 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 IGFL4Q6B9Z1 124 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 ARL17AQ8IVW1 177 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 ANAPC13Q9BS18 74 aa8.28□□□□□ -1.08
CCDC171-208ENST00000486641 CD40P25942 277 aa8.27□□□□□ -1.09
CCDC171-208ENST00000486641 PLNP26678 52 aa8.27□□□□□ -1.09
CCDC171-208ENST00000486641 LGALS1P09382 135 aaKnown RBP8.26□□□□□ -1.09
CCDC171-208ENST00000486641 DLX6P56179 175 aa8.26□□□□□ -1.09
CCDC171-208ENST00000486641 ZNF474Q6S9Z5 364 aaPredicted RBP8.26□□□□□ -1.09
CCDC171-208ENST00000486641 PPDPFLQ8WWR9 84 aa8.26□□□□□ -1.09
CCDC171-208ENST00000486641 CACNA1GO43497 2377 aa8.26□□□□□ -1.09
CCDC171-208ENST00000486641 TRAV26-2A0A0B4J265 109 aa8.26□□□□□ -1.09
CCDC171-208ENST00000486641 HLA-DMBP28068 263 aa8.26□□□□□ -1.09
CCDC171-208ENST00000486641 GAGE5Q13069 117 aa8.26□□□□□ -1.09
CCDC171-208ENST00000486641 GAGE6Q13070 117 aa8.26□□□□□ -1.09
CCDC171-208ENST00000486641 C22orf34Q6ZV56 151 aa8.26□□□□□ -1.09
CCDC171-208ENST00000486641 SEM1Q6ZVN7 128 aa8.26□□□□□ -1.09
CCDC171-208ENST00000486641 PRSS33Q8NF86 280 aa8.26□□□□□ -1.09
CCDC171-208ENST00000486641 H7C1H1 209 aa8.25□□□□□ -1.09
CCDC171-208ENST00000486641 NDUFB3O43676 98 aa8.25□□□□□ -1.09
CCDC171-208ENST00000486641 TRGV3P03979 118 aa8.25□□□□□ -1.09
CCDC171-208ENST00000486641 IGHV1-8P0DP01 117 aa8.25□□□□□ -1.09
CCDC171-208ENST00000486641 SRSF2Q01130 221 aaKnown RBP8.25□□□□□ -1.09
CCDC171-208ENST00000486641 TEN1Q86WV5 123 aa8.25□□□□□ -1.09
CCDC171-208ENST00000486641 RALYQ9UKM9 306 aaKnown RBP8.25□□□□□ -1.09
CCDC171-208ENST00000486641 UFC1Q9Y3C8 167 aa8.25□□□□□ -1.09
CCDC171-208ENST00000486641 PLCE1Q9P212 2302 aa8.25□□□□□ -1.09
CCDC171-208ENST00000486641 MALRD1Q5VYJ5 2156 aa8.25□□□□□ -1.09
CCDC171-208ENST00000486641 FABP5P3A8MUU1 101 aa8.25□□□□□ -1.09
CCDC171-208ENST00000486641 B5MCH6 92 aa8.25□□□□□ -1.09
CCDC171-208ENST00000486641 IGHG4P01861 327 aa8.25□□□□□ -1.09
CCDC171-208ENST00000486641 TMEM78Q5T7P6 136 aa8.25□□□□□ -1.09
CCDC171-208ENST00000486641 NRACQ8N912 160 aa8.25□□□□□ -1.09
CCDC171-208ENST00000486641 DMXL2Q8TDJ6 3036 aa8.24□□□□□ -1.09
CCDC171-208ENST00000486641 IGHV1-3A0A0C4DH29 117 aa8.24□□□□□ -1.09
CCDC171-208ENST00000486641 FAM90A27PA6NNH2 459 aa8.24□□□□□ -1.09
CCDC171-208ENST00000486641 F8VRH5 84 aa8.24□□□□□ -1.09
CCDC171-208ENST00000486641 TNFRSF13BO14836 293 aaPredicted RBP8.24□□□□□ -1.09
CCDC171-208ENST00000486641 LOXP28300 417 aaPredicted RBP8.24□□□□□ -1.09
CCDC171-208ENST00000486641 UBE2D3P61077 147 aa8.24□□□□□ -1.09
CCDC171-208ENST00000486641 UBE2D2P62837 147 aa8.24□□□□□ -1.09
CCDC171-208ENST00000486641 LPAL2Q16609 132 aa8.24□□□□□ -1.09
CCDC171-208ENST00000486641 ZFAND6Q6FIF0 208 aa8.24□□□□□ -1.09
CCDC171-208ENST00000486641 KIR2DL4Q99706 377 aa8.24□□□□□ -1.09
CCDC171-208ENST00000486641 PRO3102Q9H379 93 aa8.24□□□□□ -1.09
CCDC171-208ENST00000486641 TNRC18O15417 2968 aaPredicted RBP8.24□□□□□ -1.09
CCDC171-208ENST00000486641 LAMTOR5O43504 91 aa8.24□□□□□ -1.09
CCDC171-208ENST00000486641 CNIH1O95406 144 aa8.24□□□□□ -1.09
CCDC171-208ENST00000486641 ZNF688P0C7X2 276 aa8.24□□□□□ -1.09
CCDC171-208ENST00000486641 NHLRC4P0CG21 123 aaPredicted RBP8.24□□□□□ -1.09
CCDC171-208ENST00000486641 UBE2D1P51668 147 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms