RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 SAMD10Q9BYL1 202 aa15.6■□□□□ 0.09
HPS3-206ENST00000486530 TRAV8-2A0A0B4J237 113 aa15.59■□□□□ 0.09
HPS3-206ENST00000486530 A0A1B0GUT8 65 aa15.59■□□□□ 0.09
HPS3-206ENST00000486530 BMI1P35226 326 aa15.59■□□□□ 0.09
HPS3-206ENST00000486530 CYB5R2Q6BCY4 276 aa15.59■□□□□ 0.09
HPS3-206ENST00000486530 ALKBH7Q9BT30 221 aaPredicted RBP15.59■□□□□ 0.09
HPS3-206ENST00000486530 VPREB3Q9UKI3 123 aa15.59■□□□□ 0.09
HPS3-206ENST00000486530 A0A1B0GW15 77 aa15.59■□□□□ 0.09
HPS3-206ENST00000486530 TMEM189A5PLL7 270 aa15.59■□□□□ 0.09
HPS3-206ENST00000486530 RIGQ13278 110 aa15.59■□□□□ 0.09
HPS3-206ENST00000486530 TMEM95Q3KNT9 176 aa15.59■□□□□ 0.09
HPS3-206ENST00000486530 WFDC11Q8NEX6 87 aa15.59■□□□□ 0.09
HPS3-206ENST00000486530 RCHY1Q96PM5 261 aa15.59■□□□□ 0.09
HPS3-206ENST00000486530 NPFFR1Q9GZQ6 430 aa15.59■□□□□ 0.09
HPS3-206ENST00000486530 A0A1W2PS18 150 aa15.58■□□□□ 0.08
HPS3-206ENST00000486530 TMEM89A2RUT3 159 aa15.58■□□□□ 0.08
HPS3-206ENST00000486530 PRAC2D3DTV9 90 aa15.58■□□□□ 0.08
HPS3-206ENST00000486530 IQCJQ1A5X6 159 aa15.58■□□□□ 0.08
HPS3-206ENST00000486530 Q6YL49 198 aa15.58■□□□□ 0.08
HPS3-206ENST00000486530 PSMB8P28062 276 aa15.57■□□□□ 0.08
HPS3-206ENST00000486530 LCNL1Q6ZST4 164 aa15.57■□□□□ 0.08
HPS3-206ENST00000486530 RPS20P60866 119 aaKnown RBP15.57■□□□□ 0.08
HPS3-206ENST00000486530 ERCC8Q13216 396 aa15.57■□□□□ 0.08
HPS3-206ENST00000486530 SIGLECL1Q8N7X8 197 aa15.57■□□□□ 0.08
HPS3-206ENST00000486530 BORCS7Q96B45 105 aa15.57■□□□□ 0.08
HPS3-206ENST00000486530 ZANQ9Y493 2812 aa15.56■□□□□ 0.08
HPS3-206ENST00000486530 SMAD7O15105 426 aaKnown RBP15.56■□□□□ 0.08
HPS3-206ENST00000486530 ARMS2P0C7Q2 107 aa15.56■□□□□ 0.08
HPS3-206ENST00000486530 SRSF2Q01130 221 aaKnown RBP15.56■□□□□ 0.08
HPS3-206ENST00000486530 GATD1Q8NB37 220 aa15.56■□□□□ 0.08
HPS3-206ENST00000486530 C16orf92Q96LL3 132 aa15.56■□□□□ 0.08
HPS3-206ENST00000486530 GPX1P07203 203 aa15.55■□□□□ 0.08
HPS3-206ENST00000486530 PEF1Q9UBV8 284 aaKnown RBP15.55■□□□□ 0.08
HPS3-206ENST00000486530 LINC00587B1AMM8 73 aa15.54■□□□□ 0.08
HPS3-206ENST00000486530 ZNF80P51504 273 aaPredicted RBP15.54■□□□□ 0.08
HPS3-206ENST00000486530 Q6ZWC4 215 aa15.54■□□□□ 0.08
HPS3-206ENST00000486530 ZNF324O75467 553 aaPredicted RBP15.54■□□□□ 0.08
HPS3-206ENST00000486530 AMTP48728 403 aa15.54■□□□□ 0.08
HPS3-206ENST00000486530 TMEM78Q5T7P6 136 aa15.54■□□□□ 0.08
HPS3-206ENST00000486530 LOC102724200A0A096LPH7 203 aaPredicted RBP15.53■□□□□ 0.08
HPS3-206ENST00000486530 SCGB1D1O95968 90 aa15.53■□□□□ 0.08
HPS3-206ENST00000486530 PKIAP61925 76 aa15.53■□□□□ 0.08
HPS3-206ENST00000486530 TPPP3Q9BW30 176 aa15.53■□□□□ 0.08
HPS3-206ENST00000486530 DAZ1Q9NQZ3 744 aaKnown RBP15.53■□□□□ 0.08
HPS3-206ENST00000486530 PDZD2O15018 2839 aa15.53■□□□□ 0.08
HPS3-206ENST00000486530 TMSB15BA0A087X1C1 80 aa15.52■□□□□ 0.08
HPS3-206ENST00000486530 FABP5P3A8MUU1 101 aa15.52■□□□□ 0.08
HPS3-206ENST00000486530 ZNF138P52744 262 aa15.52■□□□□ 0.08
HPS3-206ENST00000486530 C9orf47Q6ZRZ4 202 aa15.52■□□□□ 0.08
HPS3-206ENST00000486530 AGPAT4-IT1Q9H0P7 198 aa15.52■□□□□ 0.08
HPS3-206ENST00000486530 NAGKQ9UJ70 344 aa15.52■□□□□ 0.08
HPS3-206ENST00000486530 IGHV7-4-1A0A0J9YVY3 117 aa15.52■□□□□ 0.07
HPS3-206ENST00000486530 PMCHP20382 165 aa15.52■□□□□ 0.07
HPS3-206ENST00000486530 IL17RELQ6ZVW7 336 aa15.52■□□□□ 0.07
HPS3-206ENST00000486530 PPP1R14DQ9NXH3 145 aa15.52■□□□□ 0.07
HPS3-206ENST00000486530 TSTD3H0UI37 97 aa15.51■□□□□ 0.07
HPS3-206ENST00000486530 FAM106AQ4KMX7 169 aa15.51■□□□□ 0.07
HPS3-206ENST00000486530 LYZL1Q6UWQ5 148 aa15.51■□□□□ 0.07
HPS3-206ENST00000486530 GPHB5Q86YW7 130 aa15.51■□□□□ 0.07
HPS3-206ENST00000486530 CREBBPQ92793 2442 aa15.51■□□□□ 0.07
HPS3-206ENST00000486530 K7EMT4 169 aa15.5■□□□□ 0.07
HPS3-206ENST00000486530 SOCS3O14543 225 aa15.5■□□□□ 0.07
HPS3-206ENST00000486530 HOXA3O43365 443 aaPredicted RBP15.5■□□□□ 0.07
HPS3-206ENST00000486530 PRR31Q5SQ13 230 aa15.5■□□□□ 0.07
HPS3-206ENST00000486530 FOXC2Q99958 501 aa15.5■□□□□ 0.07
HPS3-206ENST00000486530 CTRLP40313 264 aa15.5■□□□□ 0.07
HPS3-206ENST00000486530 ZNF493Q6ZR52 646 aa15.5■□□□□ 0.07
HPS3-206ENST00000486530 ZNF738Q8NE65 137 aa15.5■□□□□ 0.07
HPS3-206ENST00000486530 RHPN1-AS1Q9BWJ2 59 aa15.5■□□□□ 0.07
HPS3-206ENST00000486530 ZNF702PQ9H963 129 aa15.5■□□□□ 0.07
HPS3-206ENST00000486530 NRN1Q9NPD7 142 aa15.5■□□□□ 0.07
HPS3-206ENST00000486530 HECTD1Q9ULT8 2610 aa15.5■□□□□ 0.07
HPS3-206ENST00000486530 LINC01559Q495D7 138 aa15.49■□□□□ 0.07
HPS3-206ENST00000486530 TM4SF20Q53R12 229 aa15.49■□□□□ 0.07
HPS3-206ENST00000486530 FER1L6-AS1Q8NA97 138 aa15.49■□□□□ 0.07
HPS3-206ENST00000486530 ZNF469Q96JG9 3925 aaPredicted RBP15.49■□□□□ 0.07
HPS3-206ENST00000486530 HSBP1O75506 76 aa15.48■□□□□ 0.07
HPS3-206ENST00000486530 ORM1P02763 201 aa15.48■□□□□ 0.07
HPS3-206ENST00000486530 IGLC6P0CF74 106 aa15.48■□□□□ 0.07
HPS3-206ENST00000486530 HIST1H1AQ02539 215 aaPredicted RBP15.48■□□□□ 0.07
HPS3-206ENST00000486530 FOXE3Q13461 319 aa15.48■□□□□ 0.07
HPS3-206ENST00000486530 C20orf173Q96LM9 149 aa15.48■□□□□ 0.07
HPS3-206ENST00000486530 LENEPQ9Y5L5 61 aa15.48■□□□□ 0.07
HPS3-206ENST00000486530 ELANEP08246 267 aa15.48■□□□□ 0.07
HPS3-206ENST00000486530 RNASEKQ6P5S7 137 aaKnown RBP15.48■□□□□ 0.07
HPS3-206ENST00000486530 C10orf99Q6UWK7 81 aa15.48■□□□□ 0.07
HPS3-206ENST00000486530 SMPXQ9UHP9 88 aa15.48■□□□□ 0.07
HPS3-206ENST00000486530 UNC79Q9P2D8 2635 aa15.47■□□□□ 0.07
HPS3-206ENST00000486530 OVOL1O14753 267 aa15.47■□□□□ 0.07
HPS3-206ENST00000486530 UFC1Q9Y3C8 167 aa15.47■□□□□ 0.07
HPS3-206ENST00000486530 TEX15Q9BXT5 2789 aa15.47■□□□□ 0.07
HPS3-206ENST00000486530 ZNF664Q8N3J9 261 aa15.46■□□□□ 0.07
HPS3-206ENST00000486530 TEX29Q8N6K0 151 aa15.46■□□□□ 0.07
HPS3-206ENST00000486530 RPLP1P05386 114 aaKnown RBP15.46■□□□□ 0.06
HPS3-206ENST00000486530 CD33P20138 364 aa15.46■□□□□ 0.06
HPS3-206ENST00000486530 NTF3P20783 257 aa15.46■□□□□ 0.06
HPS3-206ENST00000486530 RPL11P62913 178 aaKnown RBP15.46■□□□□ 0.06
HPS3-206ENST00000486530 DMRTA1Q5VZB9 504 aa15.46■□□□□ 0.06
HPS3-206ENST00000486530 NIT1Q86X76 327 aa15.46■□□□□ 0.06
HPS3-206ENST00000486530 FAM19A2Q8N3H0 131 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms