RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 ZNF266Q14584 549 aa12.95□□□□□ -0.34
CLDN11-206ENST00000486429 ACOT6Q3I5F7 207 aaPredicted RBP12.95□□□□□ -0.34
CLDN11-206ENST00000486429 ASB13Q8WXK3 278 aa12.95□□□□□ -0.34
CLDN11-206ENST00000486429 ZNF503Q96F45 646 aa12.95□□□□□ -0.34
CLDN11-206ENST00000486429 PYGO2Q9BRQ0 406 aa12.95□□□□□ -0.34
CLDN11-206ENST00000486429 AGPAT4-IT1Q9H0P7 198 aa12.95□□□□□ -0.34
CLDN11-206ENST00000486429 NOP10Q9NPE3 64 aaKnown RBP12.95□□□□□ -0.34
CLDN11-206ENST00000486429 KLLNB2CW77 178 aa12.94□□□□□ -0.34
CLDN11-206ENST00000486429 ATP5G1P05496 136 aa12.94□□□□□ -0.34
CLDN11-206ENST00000486429 GIPP09681 153 aaPredicted RBP12.94□□□□□ -0.34
CLDN11-206ENST00000486429 ATP5G3P48201 142 aa12.94□□□□□ -0.34
CLDN11-206ENST00000486429 RGS21Q2M5E4 152 aa12.94□□□□□ -0.34
CLDN11-206ENST00000486429 C9orf47Q6ZRZ4 202 aa12.94□□□□□ -0.34
CLDN11-206ENST00000486429 UBE2DNLQ8IWF7 75 aa12.94□□□□□ -0.34
CLDN11-206ENST00000486429 POM121L12Q8N7R1 296 aa12.94□□□□□ -0.34
CLDN11-206ENST00000486429 FAM19A4Q96LR4 140 aa12.94□□□□□ -0.34
CLDN11-206ENST00000486429 AQP10Q96PS8 301 aa12.94□□□□□ -0.34
CLDN11-206ENST00000486429 CRISP2P16562 243 aa12.93□□□□□ -0.34
CLDN11-206ENST00000486429 M6PRP20645 277 aa12.93□□□□□ -0.34
CLDN11-206ENST00000486429 CSN1S1P47710 185 aa12.93□□□□□ -0.34
CLDN11-206ENST00000486429 RAB2AP61019 212 aa12.93□□□□□ -0.34
CLDN11-206ENST00000486429 RANP62826 216 aaKnown RBP12.93□□□□□ -0.34
CLDN11-206ENST00000486429 BTN1A1Q13410 526 aa12.93□□□□□ -0.34
CLDN11-206ENST00000486429 LYPD1Q8N2G4 141 aa12.93□□□□□ -0.34
CLDN11-206ENST00000486429 Q9H3A6 140 aa12.93□□□□□ -0.34
CLDN11-206ENST00000486429 DNAH10Q8IVF4 4471 aa12.92□□□□□ -0.34
CLDN11-206ENST00000486429 A0A1W2PPV4 95 aa12.92□□□□□ -0.34
CLDN11-206ENST00000486429 CBY3A6NI87 242 aa12.92□□□□□ -0.34
CLDN11-206ENST00000486429 SNURFLB1AK76 121 aa12.92□□□□□ -0.34
CLDN11-206ENST00000486429 F5H768 121 aa12.92□□□□□ -0.34
CLDN11-206ENST00000486429 EIF3GO75821 320 aaKnown RBP eCLIP12.92□□□□□ -0.34
CLDN11-206ENST00000486429 C15orf53Q8NAA6 179 aa12.92□□□□□ -0.34
CLDN11-206ENST00000486429 VGLL1Q99990 258 aa12.92□□□□□ -0.34
CLDN11-206ENST00000486429 GPX1P07203 203 aa12.91□□□□□ -0.34
CLDN11-206ENST00000486429 NMBP08949 121 aa12.91□□□□□ -0.34
CLDN11-206ENST00000486429 RNASE4P34096 147 aaKnown RBP12.91□□□□□ -0.34
CLDN11-206ENST00000486429 ZNF138P52744 262 aa12.91□□□□□ -0.34
CLDN11-206ENST00000486429 CD300CQ08708 224 aa12.91□□□□□ -0.34
CLDN11-206ENST00000486429 HSD17B11Q8NBQ5 300 aa12.91□□□□□ -0.34
CLDN11-206ENST00000486429 ZNF492Q9P255 531 aa12.91□□□□□ -0.34
CLDN11-206ENST00000486429 RBAKDNA6NC62 111 aa12.9□□□□□ -0.34
CLDN11-206ENST00000486429 PQLC2Q6ZP29 291 aa12.9□□□□□ -0.34
CLDN11-206ENST00000486429 ZFAND2AQ8N6M9 145 aa12.9□□□□□ -0.34
CLDN11-206ENST00000486429 ZNF680Q8NEM1 530 aa12.9□□□□□ -0.34
CLDN11-206ENST00000486429 OR10G4Q8NGN3 311 aa12.9□□□□□ -0.34
CLDN11-206ENST00000486429 OR10G9Q8NGN4 311 aa12.9□□□□□ -0.34
CLDN11-206ENST00000486429 OR10G7Q8NGN6 311 aa12.9□□□□□ -0.34
CLDN11-206ENST00000486429 OR2G3Q8NGZ4 309 aa12.9□□□□□ -0.34
CLDN11-206ENST00000486429 Q8TAT8 98 aa12.9□□□□□ -0.34
CLDN11-206ENST00000486429 Q5BKY6 102 aa12.89□□□□□ -0.35
CLDN11-206ENST00000486429 PRR9Q5T870 116 aa12.89□□□□□ -0.35
CLDN11-206ENST00000486429 LINC00612Q8N6U2 182 aa12.89□□□□□ -0.35
CLDN11-206ENST00000486429 INO80EQ8NBZ0 244 aaPredicted RBP12.89□□□□□ -0.35
CLDN11-206ENST00000486429 LINC00467Q9BRT7 94 aa12.89□□□□□ -0.35
CLDN11-206ENST00000486429 PSMG3Q9BT73 122 aaPredicted RBP12.89□□□□□ -0.35
CLDN11-206ENST00000486429 FXYD6-FXYD2A0A087WZ82 144 aa12.88□□□□□ -0.35
CLDN11-206ENST00000486429 TRBV7-9A0A0J9YWB2 115 aa12.88□□□□□ -0.35
CLDN11-206ENST00000486429 ZNF324O75467 553 aaPredicted RBP12.88□□□□□ -0.35
CLDN11-206ENST00000486429 ATP6V0CP27449 155 aa12.88□□□□□ -0.35
CLDN11-206ENST00000486429 CDC34P49427 236 aaPredicted RBP12.88□□□□□ -0.35
CLDN11-206ENST00000486429 FAM74A1Q5RGS3 127 aa12.88□□□□□ -0.35
CLDN11-206ENST00000486429 EIF4E3Q8N5X7 224 aaKnown RBP12.88□□□□□ -0.35
CLDN11-206ENST00000486429 CMTM2Q8TAZ6 248 aa12.88□□□□□ -0.35
CLDN11-206ENST00000486429 RXFP4Q8TDU9 374 aa12.88□□□□□ -0.35
CLDN11-206ENST00000486429 OTORQ9NRC9 128 aa12.88□□□□□ -0.35
CLDN11-206ENST00000486429 FRAS1Q86XX4 4008 aa12.87□□□□□ -0.35
CLDN11-206ENST00000486429 GAGE12BA1L429 117 aa12.87□□□□□ -0.35
CLDN11-206ENST00000486429 RGS13O14921 159 aa12.87□□□□□ -0.35
CLDN11-206ENST00000486429 HMGB3O15347 200 aaKnown RBP12.87□□□□□ -0.35
CLDN11-206ENST00000486429 GAGE7O76087 117 aa12.87□□□□□ -0.35
CLDN11-206ENST00000486429 GAGE12FP0CL80 117 aa12.87□□□□□ -0.35
CLDN11-206ENST00000486429 GAGE12GP0CL81 117 aa12.87□□□□□ -0.35
CLDN11-206ENST00000486429 GAGE12IP0CL82 117 aa12.87□□□□□ -0.35
CLDN11-206ENST00000486429 DAZ2Q13117 558 aaKnown RBP12.87□□□□□ -0.35
CLDN11-206ENST00000486429 RNF212Q495C1 297 aa12.87□□□□□ -0.35
CLDN11-206ENST00000486429 OR2T35Q8NGX2 323 aa12.87□□□□□ -0.35
CLDN11-206ENST00000486429 HYLS1Q96M11 299 aa12.87□□□□□ -0.35
CLDN11-206ENST00000486429 RPH3ALQ9UNE2 315 aa12.87□□□□□ -0.35
CLDN11-206ENST00000486429 RNF222A6NCQ9 220 aa12.86□□□□□ -0.35
CLDN11-206ENST00000486429 DIRC3C9JPN6 131 aa12.86□□□□□ -0.35
CLDN11-206ENST00000486429 ARL14EPLP0DKL9 152 aa12.86□□□□□ -0.35
CLDN11-206ENST00000486429 ANXA2RQ3ZCQ2 193 aa12.86□□□□□ -0.35
CLDN11-206ENST00000486429 C11orf72Q8NBR9 251 aa12.86□□□□□ -0.35
CLDN11-206ENST00000486429 GSN-AS1Q9NRJ2 163 aa12.86□□□□□ -0.35
CLDN11-206ENST00000486429 TNFSF18Q9UNG2 199 aa12.86□□□□□ -0.35
CLDN11-206ENST00000486429 PGPA6NDG6 321 aa12.85□□□□□ -0.35
CLDN11-206ENST00000486429 NUDT3O95989 172 aa12.85□□□□□ -0.35
CLDN11-206ENST00000486429 MBP02144 154 aa12.85□□□□□ -0.35
CLDN11-206ENST00000486429 ARPC5LQ9BPX5 153 aa12.85□□□□□ -0.35
CLDN11-206ENST00000486429 ATG101Q9BSB4 218 aa12.85□□□□□ -0.35
CLDN11-206ENST00000486429 SH3BGRL3Q9H299 93 aa12.85□□□□□ -0.35
CLDN11-206ENST00000486429 IGHV1OR15-1A0A075B7D0 117 aa12.84□□□□□ -0.35
CLDN11-206ENST00000486429 BORCS7-ASMTA0A0B4J1R7 106 aa12.84□□□□□ -0.35
CLDN11-206ENST00000486429 STAG3L2P0CL84 134 aa12.84□□□□□ -0.35
CLDN11-206ENST00000486429 STAG3L3P0CL85 134 aa12.84□□□□□ -0.35
CLDN11-206ENST00000486429 SERF2P84101 59 aa12.84□□□□□ -0.35
CLDN11-206ENST00000486429 IBA57Q5T440 356 aaKnown RBP12.84□□□□□ -0.35
CLDN11-206ENST00000486429 Q6ZTI0 123 aa12.84□□□□□ -0.35
CLDN11-206ENST00000486429 LENEPQ9Y5L5 61 aa12.84□□□□□ -0.35
CLDN11-206ENST00000486429 IGLV2-18A0A075B6J9 118 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms