RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 TRAV5A0A0B4J249 113 aa15.68■□□□□ 0.1
SREBF1-214ENST00000486311 RNF222A6NCQ9 220 aa15.68■□□□□ 0.1
SREBF1-214ENST00000486311 LINC00612Q8N6U2 182 aa15.68■□□□□ 0.1
SREBF1-214ENST00000486311 RNF141Q8WVD5 230 aa15.68■□□□□ 0.1
SREBF1-214ENST00000486311 ODF3Q96PU9 254 aa15.68■□□□□ 0.1
SREBF1-214ENST00000486311 PFDN5Q99471 154 aa15.68■□□□□ 0.1
SREBF1-214ENST00000486311 NACAE9PAV3 2078 aa15.67■□□□□ 0.1
SREBF1-214ENST00000486311 TAAR5O14804 337 aa15.67■□□□□ 0.1
SREBF1-214ENST00000486311 RPL29P47914 159 aaKnown RBP15.67■□□□□ 0.1
SREBF1-214ENST00000486311 CCL18P55774 89 aa15.67■□□□□ 0.1
SREBF1-214ENST00000486311 CCDC28AQ8IWP9 274 aa15.67■□□□□ 0.1
SREBF1-214ENST00000486311 ATP5SQ99766 215 aa15.67■□□□□ 0.1
SREBF1-214ENST00000486311 NBDYA0A0U1RRE5 68 aa15.66■□□□□ 0.1
SREBF1-214ENST00000486311 CT45A10P0DMU9 189 aa15.66■□□□□ 0.1
SREBF1-214ENST00000486311 ZNF266Q14584 549 aa15.66■□□□□ 0.1
SREBF1-214ENST00000486311 CLINT1Q14677 625 aa15.66■□□□□ 0.1
SREBF1-214ENST00000486311 KCNRGQ8N5I3 272 aa15.66■□□□□ 0.1
SREBF1-214ENST00000486311 SLC39A9Q9NUM3 307 aa15.66■□□□□ 0.1
SREBF1-214ENST00000486311 LINC00588Q9Y4M8 146 aa15.66■□□□□ 0.1
SREBF1-214ENST00000486311 NPIPB6E9PJ23 425 aa15.65■□□□□ 0.1
SREBF1-214ENST00000486311 ZNF253O75346 499 aa15.65■□□□□ 0.1
SREBF1-214ENST00000486311 IFNA5P01569 189 aa15.65■□□□□ 0.1
SREBF1-214ENST00000486311 LEPP41159 167 aa15.65■□□□□ 0.1
SREBF1-214ENST00000486311 SMIM3Q9BZL3 60 aa15.65■□□□□ 0.1
SREBF1-214ENST00000486311 ZNF586Q9NXT0 402 aa15.65■□□□□ 0.1
SREBF1-214ENST00000486311 MUC4Q99102 2169 aa15.65■□□□□ 0.1
SREBF1-214ENST00000486311 BORCS7-ASMTA0A0B4J1R7 106 aa15.64■□□□□ 0.09
SREBF1-214ENST00000486311 UBE2L5PA0A1B0GUS4 154 aa15.64■□□□□ 0.09
SREBF1-214ENST00000486311 KANTRA0A1W2PQU2 76 aa15.64■□□□□ 0.09
SREBF1-214ENST00000486311 LRP1BQ9NZR2 4599 aa15.64■□□□□ 0.09
SREBF1-214ENST00000486311 MPDU1O75352 247 aa15.63■□□□□ 0.09
SREBF1-214ENST00000486311 ZNF575Q86XF7 245 aa15.63■□□□□ 0.09
SREBF1-214ENST00000486311 SCGB1C1Q8TD33 95 aa15.63■□□□□ 0.09
SREBF1-214ENST00000486311 MRPL53Q96EL3 112 aaKnown RBP15.63■□□□□ 0.09
SREBF1-214ENST00000486311 ARPC5LQ9BPX5 153 aa15.63■□□□□ 0.09
SREBF1-214ENST00000486311 TMEM14CQ9P0S9 112 aa15.63■□□□□ 0.09
SREBF1-214ENST00000486311 TRBV19A0A075B6N1 114 aa15.62■□□□□ 0.09
SREBF1-214ENST00000486311 J3KRW8 73 aa15.62■□□□□ 0.09
SREBF1-214ENST00000486311 TMUB2Q71RG4 321 aa15.62■□□□□ 0.09
SREBF1-214ENST00000486311 C6orf223Q8N319 242 aa15.62■□□□□ 0.09
SREBF1-214ENST00000486311 PYGO2Q9BRQ0 406 aa15.62■□□□□ 0.09
SREBF1-214ENST00000486311 ABCA13Q86UQ4 5058 aa15.62■□□□□ 0.09
SREBF1-214ENST00000486311 TRAV26-1A0A087WT03 109 aa15.61■□□□□ 0.09
SREBF1-214ENST00000486311 TRAV12-3A0A0B4J271 114 aa15.61■□□□□ 0.09
SREBF1-214ENST00000486311 SNURFLB1AK76 121 aa15.61■□□□□ 0.09
SREBF1-214ENST00000486311 BCL2L11O43521 198 aa15.61■□□□□ 0.09
SREBF1-214ENST00000486311 M6PRP20645 277 aa15.61■□□□□ 0.09
SREBF1-214ENST00000486311 FGF7P21781 194 aa15.61■□□□□ 0.09
SREBF1-214ENST00000486311 EIF5AP63241 154 aaKnown RBP15.61■□□□□ 0.09
SREBF1-214ENST00000486311 TNP2Q05952 138 aa15.61■□□□□ 0.09
SREBF1-214ENST00000486311 OR5I1Q13606 314 aa15.61■□□□□ 0.09
SREBF1-214ENST00000486311 LGALSLQ3ZCW2 172 aaPredicted RBP15.61■□□□□ 0.09
SREBF1-214ENST00000486311 GNPNAT1Q96EK6 184 aaPredicted RBP15.61■□□□□ 0.09
SREBF1-214ENST00000486311 ZNF503Q96F45 646 aa15.61■□□□□ 0.09
SREBF1-214ENST00000486311 HSPG2P98160 4391 aa15.61■□□□□ 0.09
SREBF1-214ENST00000486311 GAGE12BA1L429 117 aa15.6■□□□□ 0.09
SREBF1-214ENST00000486311 M0R3E3 92 aa15.6■□□□□ 0.09
SREBF1-214ENST00000486311 GAGE7O76087 117 aa15.6■□□□□ 0.09
SREBF1-214ENST00000486311 GAGE12FP0CL80 117 aa15.6■□□□□ 0.09
SREBF1-214ENST00000486311 GAGE12GP0CL81 117 aa15.6■□□□□ 0.09
SREBF1-214ENST00000486311 GAGE12IP0CL82 117 aa15.6■□□□□ 0.09
SREBF1-214ENST00000486311 SSX7Q7RTT5 188 aa15.6■□□□□ 0.09
SREBF1-214ENST00000486311 C9orf62Q8N4C0 152 aa15.6■□□□□ 0.09
SREBF1-214ENST00000486311 RXFP4Q8TDU9 374 aa15.6■□□□□ 0.09
SREBF1-214ENST00000486311 KCNIP2Q9NS61 270 aa15.6■□□□□ 0.09
SREBF1-214ENST00000486311 NDUFB4O95168 129 aa15.59■□□□□ 0.09
SREBF1-214ENST00000486311 HIST1H1EP10412 219 aaKnown RBP15.59■□□□□ 0.09
SREBF1-214ENST00000486311 HOXA5P20719 270 aa15.59■□□□□ 0.09
SREBF1-214ENST00000486311 DAZ2Q13117 558 aaKnown RBP15.59■□□□□ 0.09
SREBF1-214ENST00000486311 PDE6HQ13956 83 aa15.59■□□□□ 0.09
SREBF1-214ENST00000486311 WDR61Q9GZS3 305 aaKnown RBP15.59■□□□□ 0.09
SREBF1-214ENST00000486311 PRELID1Q9Y255 219 aa15.59■□□□□ 0.09
SREBF1-214ENST00000486311 C17orf112F2Z3M2 114 aa15.58■□□□□ 0.08
SREBF1-214ENST00000486311 SLC25A5P05141 298 aaKnown RBP15.58■□□□□ 0.08
SREBF1-214ENST00000486311 WFDC1Q9HC57 220 aa15.58■□□□□ 0.08
SREBF1-214ENST00000486311 H3BNG1 76 aa15.57■□□□□ 0.08
SREBF1-214ENST00000486311 NKX2-5P52952 324 aaPredicted RBP15.57■□□□□ 0.08
SREBF1-214ENST00000486311 ERCC8Q13216 396 aa15.57■□□□□ 0.08
SREBF1-214ENST00000486311 FAM19A4Q96LR4 140 aa15.57■□□□□ 0.08
SREBF1-214ENST00000486311 LINC00477Q96M19 166 aa15.57■□□□□ 0.08
SREBF1-214ENST00000486311 ZNF471Q9BX82 626 aaPredicted RBP15.57■□□□□ 0.08
SREBF1-214ENST00000486311 NPCDR1Q9BY65 106 aa15.57■□□□□ 0.08
SREBF1-214ENST00000486311 Q9H8V8 135 aa15.57■□□□□ 0.08
SREBF1-214ENST00000486311 TIMM9Q9Y5J7 89 aa15.57■□□□□ 0.08
SREBF1-214ENST00000486311 A0A0J9YY99 117 aa15.56■□□□□ 0.08
SREBF1-214ENST00000486311 C7orf71A4D174 169 aa15.56■□□□□ 0.08
SREBF1-214ENST00000486311 KLLNB2CW77 178 aa15.56■□□□□ 0.08
SREBF1-214ENST00000486311 PYYP10082 97 aa15.56■□□□□ 0.08
SREBF1-214ENST00000486311 GCSAMLQ5JQS6 135 aa15.56■□□□□ 0.08
SREBF1-214ENST00000486311 RPL7L1Q6DKI1 246 aaKnown RBP15.56■□□□□ 0.08
SREBF1-214ENST00000486311 Q6ZTI0 123 aa15.56■□□□□ 0.08
SREBF1-214ENST00000486311 ZNF680Q8NEM1 530 aa15.56■□□□□ 0.08
SREBF1-214ENST00000486311 LINC00467Q9BRT7 94 aa15.56■□□□□ 0.08
SREBF1-214ENST00000486311 AGPAT4-IT1Q9H0P7 198 aa15.56■□□□□ 0.08
SREBF1-214ENST00000486311 ZNF324O75467 553 aaPredicted RBP15.55■□□□□ 0.08
SREBF1-214ENST00000486311 TMPRSS5Q9H3S3 457 aa15.55■□□□□ 0.08
SREBF1-214ENST00000486311 TPT1P13693 172 aaKnown RBP15.54■□□□□ 0.08
SREBF1-214ENST00000486311 SLC51BQ86UW2 128 aa15.54■□□□□ 0.08
SREBF1-214ENST00000486311 EXOC3-AS1Q8N2X6 119 aa15.54■□□□□ 0.08
SREBF1-214ENST00000486311 C11orf72Q8NBR9 251 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms