RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 DIRC3C9JPN6 131 aa8.35□□□□□ -1.07
NUP50-216ENST00000486184 SPRY2O43597 315 aa8.35□□□□□ -1.07
NUP50-216ENST00000486184 LEPP41159 167 aa8.35□□□□□ -1.07
NUP50-216ENST00000486184 ERCC8Q13216 396 aa8.35□□□□□ -1.07
NUP50-216ENST00000486184 SPINK13Q1W4C9 94 aa8.35□□□□□ -1.07
NUP50-216ENST00000486184 GOLT1AQ6ZVE7 132 aa8.35□□□□□ -1.07
NUP50-216ENST00000486184 LINC00477Q96M19 166 aa8.35□□□□□ -1.07
NUP50-216ENST00000486184 TM2D3Q9BRN9 247 aa8.35□□□□□ -1.07
NUP50-216ENST00000486184 MANBALQ9NQG1 85 aa8.35□□□□□ -1.07
NUP50-216ENST00000486184 GNG13Q9P2W3 67 aa8.35□□□□□ -1.07
NUP50-216ENST00000486184 YTHDF2Q9Y5A9 579 aaKnown RBP8.35□□□□□ -1.07
NUP50-216ENST00000486184 A8MTW9 85 aa8.34□□□□□ -1.07
NUP50-216ENST00000486184 GGTLC3B5MD39 225 aa8.34□□□□□ -1.07
NUP50-216ENST00000486184 F6UZH7 168 aa8.34□□□□□ -1.07
NUP50-216ENST00000486184 M0R2Z0 102 aa8.34□□□□□ -1.07
NUP50-216ENST00000486184 PAGE4O60829 102 aa8.34□□□□□ -1.07
NUP50-216ENST00000486184 INSP01308 110 aa8.34□□□□□ -1.07
NUP50-216ENST00000486184 CDKN1BP46527 198 aa8.34□□□□□ -1.07
NUP50-216ENST00000486184 GNG5P63218 68 aa8.34□□□□□ -1.07
NUP50-216ENST00000486184 TEX261Q6UWH6 196 aa8.34□□□□□ -1.07
NUP50-216ENST00000486184 C9orf47Q6ZRZ4 202 aa8.34□□□□□ -1.07
NUP50-216ENST00000486184 ODF3Q96PU9 254 aa8.34□□□□□ -1.07
NUP50-216ENST00000486184 TMEM208Q9BTX3 173 aa8.34□□□□□ -1.07
NUP50-216ENST00000486184 RETNQ9HD89 108 aa8.34□□□□□ -1.07
NUP50-216ENST00000486184 TP53TG1Q9Y2A0 90 aa8.34□□□□□ -1.07
NUP50-216ENST00000486184 J3KRW8 73 aa8.33□□□□□ -1.08
NUP50-216ENST00000486184 TCRAP04437 139 aa8.33□□□□□ -1.08
NUP50-216ENST00000486184 ZNF138P52744 262 aa8.33□□□□□ -1.08
NUP50-216ENST00000486184 AMTNQ6UX39 209 aa8.33□□□□□ -1.08
NUP50-216ENST00000486184 CYB561D1Q8N8Q1 229 aa8.33□□□□□ -1.08
NUP50-216ENST00000486184 RNF183Q96D59 192 aa8.33□□□□□ -1.08
NUP50-216ENST00000486184 VGLL1Q99990 258 aa8.33□□□□□ -1.08
NUP50-216ENST00000486184 TCEAL7Q9BRU2 100 aa8.33□□□□□ -1.08
NUP50-216ENST00000486184 ATG101Q9BSB4 218 aa8.33□□□□□ -1.08
NUP50-216ENST00000486184 NDFIP1Q9BT67 221 aa8.33□□□□□ -1.08
NUP50-216ENST00000486184 AGPAT4-IT1Q9H0P7 198 aa8.33□□□□□ -1.08
NUP50-216ENST00000486184 EPDR1Q9UM22 224 aa8.33□□□□□ -1.08
NUP50-216ENST00000486184 GOLT1BQ9Y3E0 138 aa8.33□□□□□ -1.08
NUP50-216ENST00000486184 TRAV12-2A0A075B6T6 113 aa8.32□□□□□ -1.08
NUP50-216ENST00000486184 IGHV3OR16-12A0A075B7B8 117 aa8.32□□□□□ -1.08
NUP50-216ENST00000486184 FBLL1A6NHQ2 334 aaKnown RBP8.32□□□□□ -1.08
NUP50-216ENST00000486184 C11orf94C9JXX5 98 aa8.32□□□□□ -1.08
NUP50-216ENST00000486184 PEX7O00628 323 aa8.32□□□□□ -1.08
NUP50-216ENST00000486184 CT45A10P0DMU9 189 aa8.32□□□□□ -1.08
NUP50-216ENST00000486184 ZNF680Q8NEM1 530 aa8.32□□□□□ -1.08
NUP50-216ENST00000486184 HIST1H2BAQ96A08 127 aa8.32□□□□□ -1.08
NUP50-216ENST00000486184 IGF2BP2-AS1Q96M15 143 aa8.32□□□□□ -1.08
NUP50-216ENST00000486184 RARRES2Q99969 163 aa8.32□□□□□ -1.08
NUP50-216ENST00000486184 ZNF492Q9P255 531 aa8.32□□□□□ -1.08
NUP50-216ENST00000486184 U3KQK5 164 aa8.32□□□□□ -1.08
NUP50-216ENST00000486184 GPX1P07203 203 aa8.31□□□□□ -1.08
NUP50-216ENST00000486184 GIG44P09565 113 aaPredicted RBP8.31□□□□□ -1.08
NUP50-216ENST00000486184 TAGLN2P37802 199 aaKnown RBP8.31□□□□□ -1.08
NUP50-216ENST00000486184 AKR1C3P42330 323 aa8.31□□□□□ -1.08
NUP50-216ENST00000486184 ATP5G3P48201 142 aa8.31□□□□□ -1.08
NUP50-216ENST00000486184 UBE2G1P62253 170 aa8.31□□□□□ -1.08
NUP50-216ENST00000486184 CCL20P78556 96 aa8.31□□□□□ -1.08
NUP50-216ENST00000486184 OR11H2Q8NH07 326 aa8.31□□□□□ -1.08
NUP50-216ENST00000486184 Q8TAT8 98 aa8.31□□□□□ -1.08
NUP50-216ENST00000486184 TXNDC17Q9BRA2 123 aa8.31□□□□□ -1.08
NUP50-216ENST00000486184 OVOL2Q9BRP0 275 aa8.31□□□□□ -1.08
NUP50-216ENST00000486184 LENEPQ9Y5L5 61 aa8.31□□□□□ -1.08
NUP50-216ENST00000486184 TRBV7-9A0A0J9YWB2 115 aa8.3□□□□□ -1.08
NUP50-216ENST00000486184 BCL2P10415 239 aa8.3□□□□□ -1.08
NUP50-216ENST00000486184 RAB14P61106 215 aa8.3□□□□□ -1.08
NUP50-216ENST00000486184 FLI1Q01543 452 aaPredicted RBP8.3□□□□□ -1.08
NUP50-216ENST00000486184 TMEM256Q8N2U0 113 aa8.3□□□□□ -1.08
NUP50-216ENST00000486184 TMEM75Q8N9X5 138 aa8.3□□□□□ -1.08
NUP50-216ENST00000486184 SGK494Q96LW2 274 aa8.3□□□□□ -1.08
NUP50-216ENST00000486184 NIPSNAP3BQ9BS92 247 aa8.3□□□□□ -1.08
NUP50-216ENST00000486184 TRAV8-1A0A0A6YYK1 113 aa8.29□□□□□ -1.08
NUP50-216ENST00000486184 C7orf71A4D174 169 aa8.29□□□□□ -1.08
NUP50-216ENST00000486184 NMBP08949 121 aa8.29□□□□□ -1.08
NUP50-216ENST00000486184 CRISP2P16562 243 aa8.29□□□□□ -1.08
NUP50-216ENST00000486184 RNASE4P34096 147 aaKnown RBP8.29□□□□□ -1.08
NUP50-216ENST00000486184 MEF2BQ02080 365 aaPredicted RBP8.29□□□□□ -1.08
NUP50-216ENST00000486184 GFI1BQ5VTD9 330 aa8.29□□□□□ -1.08
NUP50-216ENST00000486184 PRNTQ86SH4 94 aa8.29□□□□□ -1.08
NUP50-216ENST00000486184 CCDC28AQ8IWP9 274 aa8.29□□□□□ -1.08
NUP50-216ENST00000486184 CSNK1G2-AS1Q8NCQ2 148 aa8.29□□□□□ -1.08
NUP50-216ENST00000486184 FMC1Q96HJ9 113 aa8.29□□□□□ -1.08
NUP50-216ENST00000486184 LINC01587Q99440 93 aa8.29□□□□□ -1.08
NUP50-216ENST00000486184 C20orf144Q9BQM9 153 aa8.29□□□□□ -1.08
NUP50-216ENST00000486184 TREM1Q9NP99 234 aa8.29□□□□□ -1.08
NUP50-216ENST00000486184 VAX2Q9UIW0 290 aa8.29□□□□□ -1.08
NUP50-216ENST00000486184 PSG8Q9UQ74 426 aa8.29□□□□□ -1.08
NUP50-216ENST00000486184 TRAV12-3A0A0B4J271 114 aa8.28□□□□□ -1.08
NUP50-216ENST00000486184 SMIM9A6NGZ8 99 aa8.28□□□□□ -1.08
NUP50-216ENST00000486184 CRXO43186 299 aaPredicted RBP8.28□□□□□ -1.08
NUP50-216ENST00000486184 PDE6DO43924 150 aa8.28□□□□□ -1.08
NUP50-216ENST00000486184 S100A9P06702 114 aaKnown RBP8.28□□□□□ -1.08
NUP50-216ENST00000486184 MIFP14174 115 aa8.28□□□□□ -1.08
NUP50-216ENST00000486184 PMS2P11Q13670 270 aa8.28□□□□□ -1.08
NUP50-216ENST00000486184 SAPCD1Q5SSQ6 148 aa8.28□□□□□ -1.08
NUP50-216ENST00000486184 FAM19A4Q96LR4 140 aa8.28□□□□□ -1.08
NUP50-216ENST00000486184 TRAV34A0A0B4J273 112 aa8.27□□□□□ -1.09
NUP50-216ENST00000486184 LOC102723971A0A1B0GUV8 181 aa8.27□□□□□ -1.09
NUP50-216ENST00000486184 SCO2A0A1W2PP80 73 aa8.27□□□□□ -1.09
NUP50-216ENST00000486184 RBFOX3A6NFN3 312 aa8.27□□□□□ -1.09
NUP50-216ENST00000486184 KLLNB2CW77 178 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms