RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 MBD2Q9UBB5 411 aa12.95□□□□□ -0.34
PRPF40A-209ENST00000486100 M0R2N4 97 aa12.94□□□□□ -0.34
PRPF40A-209ENST00000486100 FFAR4Q5NUL3 377 aa12.94□□□□□ -0.34
PRPF40A-209ENST00000486100 FAM122CQ6P4D5 195 aa12.94□□□□□ -0.34
PRPF40A-209ENST00000486100 LINC00336Q6ZUF6 198 aa12.94□□□□□ -0.34
PRPF40A-209ENST00000486100 SMIM3Q9BZL3 60 aa12.94□□□□□ -0.34
PRPF40A-209ENST00000486100 C7orf71A4D174 169 aa12.93□□□□□ -0.34
PRPF40A-209ENST00000486100 KLLNB2CW77 178 aa12.93□□□□□ -0.34
PRPF40A-209ENST00000486100 OR10J4P0C629 311 aa12.93□□□□□ -0.34
PRPF40A-209ENST00000486100 LINC00612Q8N6U2 182 aa12.93□□□□□ -0.34
PRPF40A-209ENST00000486100 SNURFLB1AK76 121 aa12.92□□□□□ -0.34
PRPF40A-209ENST00000486100 OR7C2O60412 319 aa12.92□□□□□ -0.34
PRPF40A-209ENST00000486100 ZNF324O75467 553 aaPredicted RBP12.92□□□□□ -0.34
PRPF40A-209ENST00000486100 NMBP08949 121 aa12.92□□□□□ -0.34
PRPF40A-209ENST00000486100 CRISP2P16562 243 aa12.92□□□□□ -0.34
PRPF40A-209ENST00000486100 TMEM78Q5T7P6 136 aa12.92□□□□□ -0.34
PRPF40A-209ENST00000486100 ZNF503Q96F45 646 aa12.92□□□□□ -0.34
PRPF40A-209ENST00000486100 WFDC1Q9HC57 220 aa12.92□□□□□ -0.34
PRPF40A-209ENST00000486100 ALG5Q9Y673 324 aa12.92□□□□□ -0.34
PRPF40A-209ENST00000486100 IGKV2-40A0A087WW87 121 aaPredicted RBP12.91□□□□□ -0.34
PRPF40A-209ENST00000486100 IGKV2D-40P01614 121 aaPredicted RBP12.91□□□□□ -0.34
PRPF40A-209ENST00000486100 RNASE4P34096 147 aaKnown RBP12.91□□□□□ -0.34
PRPF40A-209ENST00000486100 FAM3BP58499 235 aaPredicted RBP12.91□□□□□ -0.34
PRPF40A-209ENST00000486100 CD300CQ08708 224 aa12.91□□□□□ -0.34
PRPF40A-209ENST00000486100 LYPD1Q8N2G4 141 aa12.91□□□□□ -0.34
PRPF40A-209ENST00000486100 PHYHIPLQ96FC7 376 aa12.91□□□□□ -0.34
PRPF40A-209ENST00000486100 VGLL1Q99990 258 aa12.91□□□□□ -0.34
PRPF40A-209ENST00000486100 LINC00467Q9BRT7 94 aa12.91□□□□□ -0.34
PRPF40A-209ENST00000486100 ZNF492Q9P255 531 aa12.91□□□□□ -0.34
PRPF40A-209ENST00000486100 DNAH2Q9P225 4427 aa12.91□□□□□ -0.34
PRPF40A-209ENST00000486100 IGLV2-18A0A075B6J9 118 aa12.9□□□□□ -0.34
PRPF40A-209ENST00000486100 NUDT3O95989 172 aa12.9□□□□□ -0.34
PRPF40A-209ENST00000486100 GPX1P07203 203 aa12.9□□□□□ -0.34
PRPF40A-209ENST00000486100 TAS2R45P59539 299 aa12.9□□□□□ -0.34
PRPF40A-209ENST00000486100 RANP62826 216 aaKnown RBP12.9□□□□□ -0.34
PRPF40A-209ENST00000486100 DAZ2Q13117 558 aaKnown RBP12.9□□□□□ -0.34
PRPF40A-209ENST00000486100 BTN1A1Q13410 526 aa12.9□□□□□ -0.34
PRPF40A-209ENST00000486100 GAGE12BA1L429 117 aa12.89□□□□□ -0.35
PRPF40A-209ENST00000486100 GAGE7O76087 117 aa12.89□□□□□ -0.35
PRPF40A-209ENST00000486100 GAGE12FP0CL80 117 aa12.89□□□□□ -0.35
PRPF40A-209ENST00000486100 GAGE12GP0CL81 117 aa12.89□□□□□ -0.35
PRPF40A-209ENST00000486100 GAGE12IP0CL82 117 aa12.89□□□□□ -0.35
PRPF40A-209ENST00000486100 CSN1S1P47710 185 aa12.89□□□□□ -0.35
PRPF40A-209ENST00000486100 ANXA2RQ3ZCQ2 193 aa12.89□□□□□ -0.35
PRPF40A-209ENST00000486100 KHDC3LQ587J8 217 aa12.89□□□□□ -0.35
PRPF40A-209ENST00000486100 Q6ZNX1 250 aa12.89□□□□□ -0.35
PRPF40A-209ENST00000486100 Q6ZR54 194 aa12.89□□□□□ -0.35
PRPF40A-209ENST00000486100 ZFAND2AQ8N6M9 145 aa12.89□□□□□ -0.35
PRPF40A-209ENST00000486100 ZNF680Q8NEM1 530 aa12.89□□□□□ -0.35
PRPF40A-209ENST00000486100 ATG101Q9BSB4 218 aa12.89□□□□□ -0.35
PRPF40A-209ENST00000486100 DNAH17Q9UFH2 4485 aa12.89□□□□□ -0.35
PRPF40A-209ENST00000486100 TRBV7-9A0A0J9YWB2 115 aa12.88□□□□□ -0.35
PRPF40A-209ENST00000486100 RTL8CO15255 209 aa12.88□□□□□ -0.35
PRPF40A-209ENST00000486100 ZNF138P52744 262 aa12.88□□□□□ -0.35
PRPF40A-209ENST00000486100 UBE2L3P68036 154 aaKnown RBP12.88□□□□□ -0.35
PRPF40A-209ENST00000486100 OR5I1Q13606 314 aa12.88□□□□□ -0.35
PRPF40A-209ENST00000486100 ACOT6Q3I5F7 207 aaPredicted RBP12.88□□□□□ -0.35
PRPF40A-209ENST00000486100 EIF4E3Q8N5X7 224 aaKnown RBP12.88□□□□□ -0.35
PRPF40A-209ENST00000486100 Q9H3A6 140 aa12.88□□□□□ -0.35
PRPF40A-209ENST00000486100 RBAKDNA6NC62 111 aa12.87□□□□□ -0.35
PRPF40A-209ENST00000486100 M6PRP20645 277 aa12.87□□□□□ -0.35
PRPF40A-209ENST00000486100 C11orf72Q8NBR9 251 aa12.87□□□□□ -0.35
PRPF40A-209ENST00000486100 MED28Q9H204 178 aa12.87□□□□□ -0.35
PRPF40A-209ENST00000486100 GSN-AS1Q9NRJ2 163 aa12.87□□□□□ -0.35
PRPF40A-209ENST00000486100 HECTD4Q9Y4D8 3996 aa12.86□□□□□ -0.35
PRPF40A-209ENST00000486100 CCL18P55774 89 aa12.86□□□□□ -0.35
PRPF40A-209ENST00000486100 PRR9Q5T870 116 aa12.86□□□□□ -0.35
PRPF40A-209ENST00000486100 Q6ZTI0 123 aa12.86□□□□□ -0.35
PRPF40A-209ENST00000486100 RXFP4Q8TDU9 374 aa12.86□□□□□ -0.35
PRPF40A-209ENST00000486100 FAT2Q9NYQ8 4349 aa12.85□□□□□ -0.35
PRPF40A-209ENST00000486100 TRAV26-1A0A087WT03 109 aa12.85□□□□□ -0.35
PRPF40A-209ENST00000486100 A0A1W2PPV4 95 aa12.85□□□□□ -0.35
PRPF40A-209ENST00000486100 PRSS29PA6NIE9 313 aa12.85□□□□□ -0.35
PRPF40A-209ENST00000486100 RGS13O14921 159 aa12.85□□□□□ -0.35
PRPF40A-209ENST00000486100 HOXA5P20719 270 aa12.85□□□□□ -0.35
PRPF40A-209ENST00000486100 GNPNAT1Q96EK6 184 aaPredicted RBP12.85□□□□□ -0.35
PRPF40A-209ENST00000486100 IGHV1OR15-1A0A075B7D0 117 aa12.84□□□□□ -0.35
PRPF40A-209ENST00000486100 DIRC3C9JPN6 131 aa12.84□□□□□ -0.35
PRPF40A-209ENST00000486100 EIF3GO75821 320 aaKnown RBP eCLIP12.84□□□□□ -0.35
PRPF40A-209ENST00000486100 PQLC2Q6ZP29 291 aa12.84□□□□□ -0.35
PRPF40A-209ENST00000486100 Q6ZQT7 251 aa12.84□□□□□ -0.35
PRPF40A-209ENST00000486100 Q8TAT8 98 aa12.84□□□□□ -0.35
PRPF40A-209ENST00000486100 C18orf15Q96N68 181 aa12.84□□□□□ -0.35
PRPF40A-209ENST00000486100 KLF12Q9Y4X4 402 aa12.84□□□□□ -0.35
PRPF40A-209ENST00000486100 TRGV2A0A075B6R0 118 aa12.83□□□□□ -0.36
PRPF40A-209ENST00000486100 A0A1B0GVY2 172 aa12.83□□□□□ -0.36
PRPF40A-209ENST00000486100 PGPA6NDG6 321 aa12.83□□□□□ -0.36
PRPF40A-209ENST00000486100 H3BNG1 76 aa12.83□□□□□ -0.36
PRPF40A-209ENST00000486100 TCL1AP56279 114 aa12.83□□□□□ -0.36
PRPF40A-209ENST00000486100 RAB2AP61019 212 aa12.83□□□□□ -0.36
PRPF40A-209ENST00000486100 ZNF266Q14584 549 aa12.83□□□□□ -0.36
PRPF40A-209ENST00000486100 IBA57Q5T440 356 aaKnown RBP12.83□□□□□ -0.36
PRPF40A-209ENST00000486100 OR10G4Q8NGN3 311 aa12.83□□□□□ -0.36
PRPF40A-209ENST00000486100 OR10G9Q8NGN4 311 aa12.83□□□□□ -0.36
PRPF40A-209ENST00000486100 OR10G7Q8NGN6 311 aa12.83□□□□□ -0.36
PRPF40A-209ENST00000486100 ZNRF2Q8NHG8 242 aa12.83□□□□□ -0.36
PRPF40A-209ENST00000486100 ASB13Q8WXK3 278 aa12.83□□□□□ -0.36
PRPF40A-209ENST00000486100 AQP10Q96PS8 301 aa12.83□□□□□ -0.36
PRPF40A-209ENST00000486100 TMPRSS5Q9H3S3 457 aa12.83□□□□□ -0.36
PRPF40A-209ENST00000486100 OTORQ9NRC9 128 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms