RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SLC25A5P05141 298 aaKnown RBP8.57□□□□□ -1.04
HPS4-214ENST00000485842 LEPP41159 167 aa8.57□□□□□ -1.04
HPS4-214ENST00000485842 NKX2-5P52952 324 aaPredicted RBP8.57□□□□□ -1.04
HPS4-214ENST00000485842 GNG5P63218 68 aa8.57□□□□□ -1.04
HPS4-214ENST00000485842 KIR3DS1Q14943 382 aa8.57□□□□□ -1.04
HPS4-214ENST00000485842 ZFAND6Q6FIF0 208 aa8.57□□□□□ -1.04
HPS4-214ENST00000485842 RXFP4Q8TDU9 374 aa8.57□□□□□ -1.04
HPS4-214ENST00000485842 LINC00477Q96M19 166 aa8.57□□□□□ -1.04
HPS4-214ENST00000485842 AGPAT4-IT1Q9H0P7 198 aa8.57□□□□□ -1.04
HPS4-214ENST00000485842 A0A1B0GV50 99 aa8.56□□□□□ -1.04
HPS4-214ENST00000485842 DIRC3C9JPN6 131 aa8.56□□□□□ -1.04
HPS4-214ENST00000485842 HBE1P02100 147 aa8.56□□□□□ -1.04
HPS4-214ENST00000485842 RBMY1A1P0DJD3 496 aaKnown RBP8.56□□□□□ -1.04
HPS4-214ENST00000485842 RBMY1CP0DJD4 496 aa8.56□□□□□ -1.04
HPS4-214ENST00000485842 UBE2G2P60604 165 aa8.56□□□□□ -1.04
HPS4-214ENST00000485842 RBMY1FQ15415 496 aaKnown RBP8.56□□□□□ -1.04
HPS4-214ENST00000485842 GFI1BQ5VTD9 330 aa8.56□□□□□ -1.04
HPS4-214ENST00000485842 C9orf47Q6ZRZ4 202 aa8.56□□□□□ -1.04
HPS4-214ENST00000485842 GOLT1AQ6ZVE7 132 aa8.56□□□□□ -1.04
HPS4-214ENST00000485842 SLC51BQ86UW2 128 aa8.56□□□□□ -1.04
HPS4-214ENST00000485842 IL17DQ8TAD2 202 aa8.56□□□□□ -1.04
HPS4-214ENST00000485842 Q8TAT8 98 aa8.56□□□□□ -1.04
HPS4-214ENST00000485842 SUN5Q8TC36 379 aa8.56□□□□□ -1.04
HPS4-214ENST00000485842 ODF3Q96PU9 254 aa8.56□□□□□ -1.04
HPS4-214ENST00000485842 RBAKDNA6NC62 111 aa8.55□□□□□ -1.04
HPS4-214ENST00000485842 GGTLC3B5MD39 225 aa8.55□□□□□ -1.04
HPS4-214ENST00000485842 ZNF138P52744 262 aa8.55□□□□□ -1.04
HPS4-214ENST00000485842 PMS2P11Q13670 270 aa8.55□□□□□ -1.04
HPS4-214ENST00000485842 EIF5AL1Q6IS14 154 aaKnown RBP8.55□□□□□ -1.04
HPS4-214ENST00000485842 C5orf17Q8NAS9 161 aa8.55□□□□□ -1.04
HPS4-214ENST00000485842 SFT2D1Q8WV19 159 aa8.55□□□□□ -1.04
HPS4-214ENST00000485842 LINC01587Q99440 93 aa8.55□□□□□ -1.04
HPS4-214ENST00000485842 NEU1Q99519 415 aa8.55□□□□□ -1.04
HPS4-214ENST00000485842 TRAV12-3A0A0B4J271 114 aa8.54□□□□□ -1.04
HPS4-214ENST00000485842 LOC102723971A0A1B0GUV8 181 aa8.54□□□□□ -1.04
HPS4-214ENST00000485842 SMIM9A6NGZ8 99 aa8.54□□□□□ -1.04
HPS4-214ENST00000485842 ZNF705GA8MUZ8 300 aaPredicted RBP8.54□□□□□ -1.04
HPS4-214ENST00000485842 C3orf84H3BNL1 204 aa8.54□□□□□ -1.04
HPS4-214ENST00000485842 H2AFB1P0C5Y9 115 aa8.54□□□□□ -1.04
HPS4-214ENST00000485842 HTN1P15515 57 aa8.54□□□□□ -1.04
HPS4-214ENST00000485842 EMP1P54849 157 aa8.54□□□□□ -1.04
HPS4-214ENST00000485842 SUMO1P63165 101 aaKnown RBP8.54□□□□□ -1.04
HPS4-214ENST00000485842 RRN3P1Q2M238 152 aa8.54□□□□□ -1.04
HPS4-214ENST00000485842 DPPA3Q6W0C5 159 aa8.54□□□□□ -1.04
HPS4-214ENST00000485842 ZNF492Q9P255 531 aa8.54□□□□□ -1.04
HPS4-214ENST00000485842 YTHDF2Q9Y5A9 579 aaKnown RBP8.54□□□□□ -1.04
HPS4-214ENST00000485842 TRAV8-1A0A0A6YYK1 113 aa8.53□□□□□ -1.04
HPS4-214ENST00000485842 A0A1W2PRE2 83 aa8.53□□□□□ -1.04
HPS4-214ENST00000485842 CXorf65A6NEN9 183 aa8.53□□□□□ -1.04
HPS4-214ENST00000485842 IFNA7P01567 189 aa8.53□□□□□ -1.04
HPS4-214ENST00000485842 PRM2P04554 102 aa8.53□□□□□ -1.04
HPS4-214ENST00000485842 GPX1P07203 203 aa8.53□□□□□ -1.04
HPS4-214ENST00000485842 RNASE4P34096 147 aaKnown RBP8.53□□□□□ -1.04
HPS4-214ENST00000485842 NANOS2P60321 138 aaKnown RBP8.53□□□□□ -1.04
HPS4-214ENST00000485842 BTN1A1Q13410 526 aa8.53□□□□□ -1.04
HPS4-214ENST00000485842 TMEM256Q8N2U0 113 aa8.53□□□□□ -1.04
HPS4-214ENST00000485842 C11orf45Q8TAV5 145 aa8.53□□□□□ -1.04
HPS4-214ENST00000485842 MBD3L1Q8WWY6 194 aa8.53□□□□□ -1.04
HPS4-214ENST00000485842 FAM19A4Q96LR4 140 aa8.53□□□□□ -1.04
HPS4-214ENST00000485842 SGK494Q96LW2 274 aa8.53□□□□□ -1.04
HPS4-214ENST00000485842 NIPSNAP3BQ9BS92 247 aa8.53□□□□□ -1.04
HPS4-214ENST00000485842 C7orf71A4D174 169 aa8.52□□□□□ -1.05
HPS4-214ENST00000485842 FAM74A7A6NL05 159 aa8.52□□□□□ -1.05
HPS4-214ENST00000485842 KLLNB2CW77 178 aa8.52□□□□□ -1.05
HPS4-214ENST00000485842 H7BYZ3 331 aa8.52□□□□□ -1.05
HPS4-214ENST00000485842 K7EQM0 130 aa8.52□□□□□ -1.05
HPS4-214ENST00000485842 TCRAP04437 139 aa8.52□□□□□ -1.05
HPS4-214ENST00000485842 CRISP2P16562 243 aa8.52□□□□□ -1.05
HPS4-214ENST00000485842 SULT1A2P50226 295 aa8.52□□□□□ -1.05
HPS4-214ENST00000485842 RAB5CP51148 216 aa8.52□□□□□ -1.05
HPS4-214ENST00000485842 PRR9Q5T870 116 aa8.52□□□□□ -1.05
HPS4-214ENST00000485842 ZFAND2AQ8N6M9 145 aa8.52□□□□□ -1.05
HPS4-214ENST00000485842 ARL6IP6Q8N6S5 226 aa8.52□□□□□ -1.05
HPS4-214ENST00000485842 C20orf144Q9BQM9 153 aa8.52□□□□□ -1.05
HPS4-214ENST00000485842 CELA1Q9UNI1 258 aa8.52□□□□□ -1.05
HPS4-214ENST00000485842 SERTM2A0A1B0GWG4 89 aa8.51□□□□□ -1.05
HPS4-214ENST00000485842 TMEM189A5PLL7 270 aa8.51□□□□□ -1.05
HPS4-214ENST00000485842 TAS2R60P59551 318 aa8.51□□□□□ -1.05
HPS4-214ENST00000485842 CASC10Q5T4H9 136 aa8.51□□□□□ -1.05
HPS4-214ENST00000485842 CST9LP1Q5W188 147 aa8.51□□□□□ -1.05
HPS4-214ENST00000485842 CYB561D1Q8N8Q1 229 aa8.51□□□□□ -1.05
HPS4-214ENST00000485842 EPDR1Q9UM22 224 aa8.51□□□□□ -1.05
HPS4-214ENST00000485842 TRBV7-9A0A0J9YWB2 115 aa8.5□□□□□ -1.05
HPS4-214ENST00000485842 F6UZH7 168 aa8.5□□□□□ -1.05
HPS4-214ENST00000485842 PAGE4O60829 102 aa8.5□□□□□ -1.05
HPS4-214ENST00000485842 NMBP08949 121 aa8.5□□□□□ -1.05
HPS4-214ENST00000485842 AZU1P20160 251 aa8.5□□□□□ -1.05
HPS4-214ENST00000485842 ATP5G3P48201 142 aa8.5□□□□□ -1.05
HPS4-214ENST00000485842 ALKAL2Q6UX46 152 aa8.5□□□□□ -1.05
HPS4-214ENST00000485842 ZNF767PQ75MW2 155 aa8.5□□□□□ -1.05
HPS4-214ENST00000485842 ATG101Q9BSB4 218 aa8.5□□□□□ -1.05
HPS4-214ENST00000485842 NDFIP1Q9BT67 221 aa8.5□□□□□ -1.05
HPS4-214ENST00000485842 NKX6-2Q9C056 277 aaPredicted RBP8.5□□□□□ -1.05
HPS4-214ENST00000485842 LENEPQ9Y5L5 61 aa8.5□□□□□ -1.05
HPS4-214ENST00000485842 PEX7O00628 323 aa8.49□□□□□ -1.05
HPS4-214ENST00000485842 RGS13O14921 159 aa8.49□□□□□ -1.05
HPS4-214ENST00000485842 SPART-AS1P0CW21 52 aa8.49□□□□□ -1.05
HPS4-214ENST00000485842 FLI1Q01543 452 aaPredicted RBP8.49□□□□□ -1.05
HPS4-214ENST00000485842 FAM222AQ5U5X8 452 aa8.49□□□□□ -1.05
HPS4-214ENST00000485842 Q6ZQT7 251 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms