RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 DEFB1P60022 68 aa13.72□□□□□ -0.21
ERCC2-205ENST00000485403 TMEM183BQ1AE95 376 aa13.72□□□□□ -0.21
ERCC2-205ENST00000485403 TMEM75Q8N9X5 138 aa13.72□□□□□ -0.21
ERCC2-205ENST00000485403 OR10J6PQ8NGY7 276 aa13.72□□□□□ -0.21
ERCC2-205ENST00000485403 FMC1Q96HJ9 113 aa13.72□□□□□ -0.21
ERCC2-205ENST00000485403 VGLL1Q99990 258 aa13.72□□□□□ -0.21
ERCC2-205ENST00000485403 SMIM7Q9BQ49 75 aa13.72□□□□□ -0.21
ERCC2-205ENST00000485403 MAP6D1Q9H9H5 199 aa13.72□□□□□ -0.21
ERCC2-205ENST00000485403 C19orf73Q9NVV2 129 aa13.72□□□□□ -0.21
ERCC2-205ENST00000485403 KLF12Q9Y4X4 402 aa13.72□□□□□ -0.21
ERCC2-205ENST00000485403 TRAV8-1A0A0A6YYK1 113 aa13.71□□□□□ -0.21
ERCC2-205ENST00000485403 RBAKDNA6NC62 111 aa13.71□□□□□ -0.21
ERCC2-205ENST00000485403 F6UB75 175 aa13.71□□□□□ -0.21
ERCC2-205ENST00000485403 SCO1O75880 301 aa13.71□□□□□ -0.21
ERCC2-205ENST00000485403 ADCYAP1P18509 176 aa13.71□□□□□ -0.21
ERCC2-205ENST00000485403 CMC4P56277 68 aaPredicted RBP13.71□□□□□ -0.21
ERCC2-205ENST00000485403 TAS2R60P59551 318 aa13.71□□□□□ -0.21
ERCC2-205ENST00000485403 ERCC8Q13216 396 aa13.71□□□□□ -0.21
ERCC2-205ENST00000485403 FAM74A3Q4VXF1 159 aa13.71□□□□□ -0.21
ERCC2-205ENST00000485403 OR8A1Q8NGG7 326 aa13.71□□□□□ -0.21
ERCC2-205ENST00000485403 A8MZ25 164 aa13.7□□□□□ -0.22
ERCC2-205ENST00000485403 ZNF705DP0CH99 300 aaPredicted RBP13.7□□□□□ -0.22
ERCC2-205ENST00000485403 ZNF705BP0CI00 300 aaPredicted RBP13.7□□□□□ -0.22
ERCC2-205ENST00000485403 HIST1H1AQ02539 215 aaPredicted RBP13.7□□□□□ -0.22
ERCC2-205ENST00000485403 FAM110AQ9BQ89 295 aa13.7□□□□□ -0.22
ERCC2-205ENST00000485403 PSG8Q9UQ74 426 aa13.7□□□□□ -0.22
ERCC2-205ENST00000485403 COL7A1Q02388 2944 aa13.7□□□□□ -0.22
ERCC2-205ENST00000485403 FBLL1A6NHQ2 334 aaKnown RBP13.69□□□□□ -0.22
ERCC2-205ENST00000485403 IGLV2-11P01706 119 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 FLI1Q01543 452 aaPredicted RBP13.69□□□□□ -0.22
ERCC2-205ENST00000485403 ODF3L2Q3SX64 289 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 DEFB121Q5J5C9 76 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 EBLN2Q6P2I7 272 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 PRNTQ86SH4 94 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 TRBV6-1A0A0K0K1D8 114 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 OR11H12B2RN74 326 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 IGHV4-30-4P0DP06 118 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 GNG4P50150 75 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 CENPWQ5EE01 88 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 TMEM78Q5T7P6 136 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 FOXI2Q6ZQN5 318 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 C9orf47Q6ZRZ4 202 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 Q86TA4 180 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 BAGE2Q86Y30 109 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 IGF2BP2-AS1Q96M15 143 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 AGPAT4-IT1Q9H0P7 198 aa13.69□□□□□ -0.22
ERCC2-205ENST00000485403 KNCNA6PVL3 124 aa13.68□□□□□ -0.22
ERCC2-205ENST00000485403 NPIPB6E9PJ23 425 aa13.68□□□□□ -0.22
ERCC2-205ENST00000485403 TMEM241Q24JQ0 296 aa13.68□□□□□ -0.22
ERCC2-205ENST00000485403 NIPSNAP3BQ9BS92 247 aa13.68□□□□□ -0.22
ERCC2-205ENST00000485403 WFDC10AQ9H1F0 79 aa13.68□□□□□ -0.22
ERCC2-205ENST00000485403 SAV1Q9H4B6 383 aaPredicted RBP13.68□□□□□ -0.22
ERCC2-205ENST00000485403 A0A0J9YX75 114 aa13.67□□□□□ -0.22
ERCC2-205ENST00000485403 C9JCJ5 164 aa13.67□□□□□ -0.22
ERCC2-205ENST00000485403 DUSP14O95147 198 aaKnown RBP13.67□□□□□ -0.22
ERCC2-205ENST00000485403 SNAPINO95295 136 aa13.67□□□□□ -0.22
ERCC2-205ENST00000485403 GDF5OSQ5U4N7 250 aa13.67□□□□□ -0.22
ERCC2-205ENST00000485403 APRG1Q8IVJ8 170 aa13.67□□□□□ -0.22
ERCC2-205ENST00000485403 LINC00477Q96M19 166 aa13.67□□□□□ -0.22
ERCC2-205ENST00000485403 NAT8Q9UHE5 227 aa13.67□□□□□ -0.22
ERCC2-205ENST00000485403 TRBV20OR9-2A0A075B6H5 130 aa13.66□□□□□ -0.22
ERCC2-205ENST00000485403 LTAP01374 205 aa13.66□□□□□ -0.22
ERCC2-205ENST00000485403 ZNF138P52744 262 aa13.66□□□□□ -0.22
ERCC2-205ENST00000485403 ACTL10Q5JWF8 245 aa13.66□□□□□ -0.22
ERCC2-205ENST00000485403 ATRAIDQ6UW56 229 aa13.66□□□□□ -0.22
ERCC2-205ENST00000485403 DEFB125Q8N687 156 aa13.66□□□□□ -0.22
ERCC2-205ENST00000485403 Q8TAT8 98 aa13.66□□□□□ -0.22
ERCC2-205ENST00000485403 ASCL2Q99929 193 aa13.66□□□□□ -0.22
ERCC2-205ENST00000485403 BTN1A1Q13410 526 aa13.65□□□□□ -0.22
ERCC2-205ENST00000485403 ZNF124Q15973 351 aa13.65□□□□□ -0.22
ERCC2-205ENST00000485403 ZNF492Q9P255 531 aa13.65□□□□□ -0.22
ERCC2-205ENST00000485403 ZFP30Q9Y2G7 519 aa13.65□□□□□ -0.22
ERCC2-205ENST00000485403 NBEAL2Q6ZNJ1 2754 aa13.65□□□□□ -0.22
ERCC2-205ENST00000485403 AGRNO00468 2067 aa13.65□□□□□ -0.22
ERCC2-205ENST00000485403 PGPEP1LA6NFU8 196 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 FRMD6-AS1P0C7T7 363 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 HLA-DRB4P13762 266 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 NHLRC2Q8NBF2 726 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 OR4B1Q8NGF8 309 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 OCC1Q8TAD7 63 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 B9D2Q9BPU9 175 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 NDFIP1Q9BT67 221 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 SDF2L1Q9HCN8 221 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 LY96Q9Y6Y9 160 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 HLA-DRB4X5D2U9 266 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 CT45A10P0DMU9 189 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 SAPCD1Q5SSQ6 148 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 TVP23CQ96ET8 276 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 SRD5A3Q9H8P0 318 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 PPP1R14DQ9NXH3 145 aa13.64□□□□□ -0.23
ERCC2-205ENST00000485403 H3BMM0 161 aa13.63□□□□□ -0.23
ERCC2-205ENST00000485403 IGKV3-20P01619 116 aa13.63□□□□□ -0.23
ERCC2-205ENST00000485403 MGST1P10620 155 aaKnown RBP13.63□□□□□ -0.23
ERCC2-205ENST00000485403 ADIRFQ15847 76 aa13.63□□□□□ -0.23
ERCC2-205ENST00000485403 LINC00322Q6ZN03 302 aaPredicted RBP13.63□□□□□ -0.23
ERCC2-205ENST00000485403 TMEM183AQ8IXX5 376 aa13.63□□□□□ -0.23
ERCC2-205ENST00000485403 TENM3Q9P273 2699 aa13.62□□□□□ -0.23
ERCC2-205ENST00000485403 STAB2Q8WWQ8 2551 aa13.62□□□□□ -0.23
ERCC2-205ENST00000485403 IGLV2-8P01709 118 aa13.62□□□□□ -0.23
ERCC2-205ENST00000485403 RPL23P62829 140 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms