RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.21□□□□□ -2.22
SMC4-215ENST00000484799 LOC107986453A0A1B0GWG9 222 aa1.21□□□□□ -2.22
SMC4-215ENST00000484799 C5orf67F2Z3F1 127 aa1.21□□□□□ -2.22
SMC4-215ENST00000484799 DPM2O94777 84 aa1.21□□□□□ -2.22
SMC4-215ENST00000484799 DBIP07108 87 aaKnown RBP1.21□□□□□ -2.22
SMC4-215ENST00000484799 ZNF25P17030 456 aaPredicted RBP1.21□□□□□ -2.22
SMC4-215ENST00000484799 RPL22P35268 128 aaKnown RBP1.21□□□□□ -2.22
SMC4-215ENST00000484799 ODF3Q96PU9 254 aa1.21□□□□□ -2.22
SMC4-215ENST00000484799 TAF9BQ9HBM6 251 aa1.21□□□□□ -2.22
SMC4-215ENST00000484799 JPT1Q9UK76 154 aa1.21□□□□□ -2.22
SMC4-215ENST00000484799 TNFSF18Q9UNG2 199 aa1.21□□□□□ -2.22
SMC4-215ENST00000484799 MED23Q9ULK4 1368 aa1.21□□□□□ -2.22
SMC4-215ENST00000484799 MYO18AQ92614 2054 aaKnown RBP1.2□□□□□ -2.22
SMC4-215ENST00000484799 HMCN1Q96RW7 5635 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 UNC13CQ8NB66 2214 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 XIRP1Q702N8 1843 aaKnown RBP1.2□□□□□ -2.22
SMC4-215ENST00000484799 C9orf170A2RU37 121 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 DNAL4O96015 105 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 IGHV3-33P01772 117 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 SCTP09683 121 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 CRYGSP22914 178 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 DIAPH2-AS1Q14236 149 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 OR8B8Q15620 311 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 DEFB115Q30KQ5 88 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 GLIPR1L1Q6UWM5 242 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 LINC00269Q8N2A0 174 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 TEX29Q8N6K0 151 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 PLPP5Q8NEB5 264 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 ZC2HC1AQ96GY0 325 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 OBSCN-AS1Q96MR7 158 aa1.2□□□□□ -2.22
SMC4-215ENST00000484799 SIP14410 1827 aa1.19□□□□□ -2.22
SMC4-215ENST00000484799 COL6A6A6NMZ7 2263 aa1.19□□□□□ -2.22
SMC4-215ENST00000484799 PTPRFP10586 1907 aa1.19□□□□□ -2.22
SMC4-215ENST00000484799 FHAD1B1AJZ9 1412 aa1.19□□□□□ -2.22
SMC4-215ENST00000484799 MIR22HGQ0VDD5 57 aa1.19□□□□□ -2.22
SMC4-215ENST00000484799 FAM135BQ49AJ0 1406 aa1.19□□□□□ -2.22
SMC4-215ENST00000484799 CCSMST1Q4G0I0 132 aa1.19□□□□□ -2.22
SMC4-215ENST00000484799 CASC2Q6XLA1 102 aa1.19□□□□□ -2.22
SMC4-215ENST00000484799 FOXI2Q6ZQN5 318 aa1.19□□□□□ -2.22
SMC4-215ENST00000484799 LINC00299Q6ZSB3 139 aa1.19□□□□□ -2.22
SMC4-215ENST00000484799 OR51A4Q8NGJ6 313 aa1.19□□□□□ -2.22
SMC4-215ENST00000484799 CLEC2BQ92478 149 aa1.19□□□□□ -2.22
SMC4-215ENST00000484799 MAGOHBQ96A72 148 aaKnown RBP1.19□□□□□ -2.22
SMC4-215ENST00000484799 FLG2Q5D862 2391 aaPredicted RBP1.19□□□□□ -2.22
SMC4-215ENST00000484799 KMT2BQ9UMN6 2715 aaPredicted RBP1.18□□□□□ -2.22
SMC4-215ENST00000484799 UQCRQO14949 82 aa1.18□□□□□ -2.22
SMC4-215ENST00000484799 FOXA3P55318 350 aaPredicted RBP1.18□□□□□ -2.22
SMC4-215ENST00000484799 PSPHP78330 225 aa1.18□□□□□ -2.22
SMC4-215ENST00000484799 ASB16-AS1Q495Z4 193 aa1.18□□□□□ -2.22
SMC4-215ENST00000484799 BRK1Q8WUW1 75 aa1.18□□□□□ -2.22
SMC4-215ENST00000484799 CIB3Q96Q77 187 aaPredicted RBP1.18□□□□□ -2.22
SMC4-215ENST00000484799 CHD3Q12873 2000 aaKnown RBP1.18□□□□□ -2.22
SMC4-215ENST00000484799 ZFC3H1O60293 1989 aaKnown RBP1.17□□□□□ -2.22
SMC4-215ENST00000484799 TMEM189A5PLL7 270 aa1.17□□□□□ -2.22
SMC4-215ENST00000484799 JMJD7-PLA2G4BH0Y9G9 81 aa1.17□□□□□ -2.22
SMC4-215ENST00000484799 HBDP02042 147 aa1.17□□□□□ -2.22
SMC4-215ENST00000484799 ETV6P41212 452 aa1.17□□□□□ -2.22
SMC4-215ENST00000484799 MORN2Q502X0 79 aa1.17□□□□□ -2.22
SMC4-215ENST00000484799 TCTE3Q8IZS6 198 aa1.17□□□□□ -2.22
SMC4-215ENST00000484799 AP1S3Q96PC3 154 aa1.17□□□□□ -2.22
SMC4-215ENST00000484799 NIT2Q9NQR4 276 aa1.17□□□□□ -2.22
SMC4-215ENST00000484799 MPC1Q9Y5U8 109 aa1.17□□□□□ -2.22
SMC4-215ENST00000484799 PEAK1Q9H792 1746 aa1.17□□□□□ -2.22
SMC4-215ENST00000484799 USP54Q70EL1 1684 aa1.16□□□□□ -2.22
SMC4-215ENST00000484799 DSPPQ9NZW4 1301 aa1.16□□□□□ -2.22
SMC4-215ENST00000484799 ERBINQ96RT1 1412 aa1.16□□□□□ -2.22
SMC4-215ENST00000484799 TANC2Q9HCD6 1990 aa1.16□□□□□ -2.22
SMC4-215ENST00000484799 C3orf85A0A1B0GTC6 90 aa1.16□□□□□ -2.22
SMC4-215ENST00000484799 PNMA8CA0A1B0GUJ8 204 aa1.16□□□□□ -2.22
SMC4-215ENST00000484799 IFITM5A6NNB3 132 aa1.16□□□□□ -2.22
SMC4-215ENST00000484799 M0QZK8 103 aa1.16□□□□□ -2.22
SMC4-215ENST00000484799 TNFSF15O95150 251 aa1.16□□□□□ -2.22
SMC4-215ENST00000484799 CCL4P13236 92 aa1.16□□□□□ -2.22
SMC4-215ENST00000484799 CMPK1P30085 196 aa1.16□□□□□ -2.22
SMC4-215ENST00000484799 DNAJB13P59910 316 aa1.16□□□□□ -2.22
SMC4-215ENST00000484799 SPRNQ5BIV9 151 aa1.16□□□□□ -2.22
SMC4-215ENST00000484799 DLG5Q8TDM6 1919 aa1.16□□□□□ -2.22
SMC4-215ENST00000484799 MUC4Q99102 2169 aa1.15□□□□□ -2.22
SMC4-215ENST00000484799 C9JAW5 83 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 OR2H2O95918 312 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 PPYP01298 95 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 PAEPP09466 180 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 SLC25A4P12235 298 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 SDC4P31431 198 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 BLCAPP62952 87 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 HSD17B12Q53GQ0 312 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 IZUMO2Q6UXV1 221 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 OR4S1Q8NGB4 309 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 LZICQ8WZA0 190 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 AMELYQ99218 206 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 NABP2Q9BQ15 211 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 CALML5Q9NZT1 146 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 HIGD1AQ9Y241 93 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 C22orf24Q9Y442 160 aa1.15□□□□□ -2.23
SMC4-215ENST00000484799 ARHGEF10O15013 1369 aa1.14□□□□□ -2.23
SMC4-215ENST00000484799 A0A0J9YY99 117 aa1.14□□□□□ -2.23
SMC4-215ENST00000484799 LOC105371267A0A1B0GV96 52 aa1.14□□□□□ -2.23
SMC4-215ENST00000484799 SULT1C4O75897 302 aa1.14□□□□□ -2.23
SMC4-215ENST00000484799 HIST1H1BP16401 226 aaKnown RBP1.14□□□□□ -2.23
SMC4-215ENST00000484799 QRFPP83859 136 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms