RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 SAA1P0DJI8 122 aaPredicted RBP1.25□□□□□ -2.21
ITGB1-213ENST00000484088 CXCL8P10145 99 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 COL8A2P25067 703 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 POLR2IP36954 125 aaKnown RBP1.25□□□□□ -2.21
ITGB1-213ENST00000484088 SSR2P43308 183 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 UBE2G1P62253 170 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 RPL30P62888 115 aaKnown RBP1.25□□□□□ -2.21
ITGB1-213ENST00000484088 MPV17LQ2QL34 196 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 ASB16-AS1Q495Z4 193 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 KRTAP13-2Q52LG2 175 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.25□□□□□ -2.21
ITGB1-213ENST00000484088 TMEM170BQ5T4T1 132 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 RPL7L1Q6DKI1 246 aaKnown RBP1.25□□□□□ -2.21
ITGB1-213ENST00000484088 NOXRED1Q6NXP6 359 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 GUSBP11Q6P575 273 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 ATP11AUNQ6ZP68 121 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 C7orf65Q6ZTY9 151 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 C6orf201Q7Z4U5 140 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 C5orf38Q86SI9 138 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 SERP2Q8N6R1 65 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 C10orf105Q8TEF2 133 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 DYNLRB2Q8TF09 96 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 LSM10Q969L4 123 aaKnown RBP1.25□□□□□ -2.21
ITGB1-213ENST00000484088 OR8B2Q96RD0 313 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 SCRT1Q9BWW7 348 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 DPH3P1Q9H4G8 78 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 DYNLRB1Q9NP97 96 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 NXT2Q9NPJ8 142 aaKnown RBP1.25□□□□□ -2.21
ITGB1-213ENST00000484088 CYTL1Q9NRR1 136 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 IL36BQ9NZH7 164 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 ZNRD1Q9P1U0 126 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 LSM2Q9Y333 95 aaKnown RBP1.25□□□□□ -2.21
ITGB1-213ENST00000484088 TRAPPC1Q9Y5R8 145 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 LY96Q9Y6Y9 160 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 RBBP6Q7Z6E9 1792 aaKnown RBP1.25□□□□□ -2.21
ITGB1-213ENST00000484088 TIAM1Q13009 1591 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 DIP2AQ14689 1571 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 EHBP1L1Q8N3D4 1523 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 MYH7P12883 1935 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 PLXND1Q9Y4D7 1925 aa1.25□□□□□ -2.21
ITGB1-213ENST00000484088 CACNA1SQ13698 1873 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 ZNF106Q9H2Y7 1883 aaKnown RBP1.24□□□□□ -2.21
ITGB1-213ENST00000484088 PHIPQ8WWQ0 1821 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 TRAV17A0A0B4J275 112 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 IGHV1OR15-9A0A0B4J2B8 117 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 IGHV1-24A0A0C4DH33 117 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 TMEM223A0PJW6 202 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 A8MUU9 505 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 J3QLW9 94 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 M0R129 80 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 BPY2O14599 106 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 TIMM17BO60830 172 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 SLC25A14O95258 325 aaPredicted RBP1.24□□□□□ -2.21
ITGB1-213ENST00000484088 FSTL3O95633 263 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 TCL1BO95988 128 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 LTAP01374 205 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 COX8AP10176 69 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 FUSP35637 526 aaKnown RBP eCLIP1.24□□□□□ -2.21
ITGB1-213ENST00000484088 RPL27AP46776 148 aaKnown RBP1.24□□□□□ -2.21
ITGB1-213ENST00000484088 ZNF80P51504 273 aaPredicted RBP1.24□□□□□ -2.21
ITGB1-213ENST00000484088 FXYD7P58549 80 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 LINC00313P59037 77 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 BLCAPP62952 87 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 SSBP1Q04837 148 aaKnown RBP1.24□□□□□ -2.21
ITGB1-213ENST00000484088 RPL18Q07020 188 aaKnown RBP1.24□□□□□ -2.21
ITGB1-213ENST00000484088 FUT5Q11128 374 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 FOXF1Q12946 379 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 WFDC2Q14508 124 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 LY6EQ16553 131 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 LINC00303Q3SY05 128 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 SP6Q3SY56 376 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 LINC01554Q52M75 96 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 RNASE13Q5GAN3 156 aaKnown RBP1.24□□□□□ -2.21
ITGB1-213ENST00000484088 UNQ9165/PRO28630Q6UXU0 137 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 LINC00643Q86TS7 51 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 PDPNQ86YL7 162 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 GPHB5Q86YW7 130 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 LINC00337Q8N6G1 96 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 FAM216BQ8N7L0 139 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 STAG3L4Q8TBR4 150 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 AQP3Q92482 292 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 DIRC1Q969H9 104 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 SCGB3A1Q96QR1 104 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 RNF5Q99942 180 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 C16orf95Q9H693 158 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 MANBALQ9NQG1 85 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 NHP2Q9NX24 153 aaKnown RBP1.24□□□□□ -2.21
ITGB1-213ENST00000484088 HIGD1BQ9P298 99 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 ZNF706Q9Y5V0 76 aaPredicted RBP1.24□□□□□ -2.21
ITGB1-213ENST00000484088 ARL2-SNX15V9GYD0 113 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 LAMC1P11047 1609 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 MYH10P35580 1976 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 IQGAP2Q13576 1575 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 SAMD9Q5K651 1589 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 AKAP11Q9UKA4 1901 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 MYH13Q9UKX3 1938 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 KCPQ6ZWJ8 1503 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 ARHGEF12Q9NZN5 1544 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 KIF20BQ96Q89 1820 aa1.24□□□□□ -2.21
ITGB1-213ENST00000484088 C10orf71Q711Q0 1435 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms