RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 PRR9Q5T870 116 aa12.44□□□□□ -0.42
ATG4B-221ENST00000483778 FAM167A-AS1Q96KT0 104 aa12.44□□□□□ -0.42
ATG4B-221ENST00000483778 VGLL1Q99990 258 aa12.44□□□□□ -0.42
ATG4B-221ENST00000483778 PYGO2Q9BRQ0 406 aa12.44□□□□□ -0.42
ATG4B-221ENST00000483778 SLC25A2Q9BXI2 301 aa12.44□□□□□ -0.42
ATG4B-221ENST00000483778 GPN1Q9HCN4 374 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-221ENST00000483778 TMEM14CQ9P0S9 112 aa12.44□□□□□ -0.42
ATG4B-221ENST00000483778 TP53TG3Q9ULZ0 132 aa12.44□□□□□ -0.42
ATG4B-221ENST00000483778 KLF12Q9Y4X4 402 aa12.44□□□□□ -0.42
ATG4B-221ENST00000483778 IGKV2-40A0A087WW87 121 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-221ENST00000483778 KLLNB2CW77 178 aa12.43□□□□□ -0.42
ATG4B-221ENST00000483778 IGKV2D-40P01614 121 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-221ENST00000483778 SLC25A5P05141 298 aaKnown RBP12.43□□□□□ -0.42
ATG4B-221ENST00000483778 MIR17HGQ75NE6 70 aa12.43□□□□□ -0.42
ATG4B-221ENST00000483778 THAP6Q8TBB0 222 aa12.43□□□□□ -0.42
ATG4B-221ENST00000483778 MRPL53Q96EL3 112 aaKnown RBP12.43□□□□□ -0.42
ATG4B-221ENST00000483778 ZNF503Q96F45 646 aa12.43□□□□□ -0.42
ATG4B-221ENST00000483778 A0A096LPF7 62 aa12.42□□□□□ -0.42
ATG4B-221ENST00000483778 FAM240BA0A1B0GVZ2 78 aa12.42□□□□□ -0.42
ATG4B-221ENST00000483778 ICAM4Q14773 271 aa12.42□□□□□ -0.42
ATG4B-221ENST00000483778 NPCDR1Q9BY65 106 aa12.42□□□□□ -0.42
ATG4B-221ENST00000483778 TIMM9Q9Y5J7 89 aa12.42□□□□□ -0.42
ATG4B-221ENST00000483778 LRP1BQ9NZR2 4599 aa12.41□□□□□ -0.42
ATG4B-221ENST00000483778 H0YIZ8 118 aa12.41□□□□□ -0.42
ATG4B-221ENST00000483778 HBG1P69891 147 aa12.41□□□□□ -0.42
ATG4B-221ENST00000483778 HBG2P69892 147 aa12.41□□□□□ -0.42
ATG4B-221ENST00000483778 ATP6V1FQ16864 119 aa12.41□□□□□ -0.42
ATG4B-221ENST00000483778 STX12Q86Y82 276 aa12.41□□□□□ -0.42
ATG4B-221ENST00000483778 ZFAND2AQ8N6M9 145 aa12.41□□□□□ -0.42
ATG4B-221ENST00000483778 LINC00477Q96M19 166 aa12.41□□□□□ -0.42
ATG4B-221ENST00000483778 CCDC32Q9BV29 185 aa12.41□□□□□ -0.42
ATG4B-221ENST00000483778 OR5AC2Q9NZP5 309 aa12.41□□□□□ -0.42
ATG4B-221ENST00000483778 H3BNG1 76 aa12.4□□□□□ -0.42
ATG4B-221ENST00000483778 KRTAP10-2P60368 255 aa12.4□□□□□ -0.42
ATG4B-221ENST00000483778 FAM122CQ6P4D5 195 aa12.4□□□□□ -0.42
ATG4B-221ENST00000483778 C9orf47Q6ZRZ4 202 aa12.4□□□□□ -0.42
ATG4B-221ENST00000483778 SPATA12Q7Z6I5 190 aa12.4□□□□□ -0.42
ATG4B-221ENST00000483778 UPK3BQ9BT76 320 aa12.4□□□□□ -0.42
ATG4B-221ENST00000483778 Q9H3A6 140 aa12.4□□□□□ -0.42
ATG4B-221ENST00000483778 PRELID1Q9Y255 219 aa12.4□□□□□ -0.42
ATG4B-221ENST00000483778 MRPS16Q9Y3D3 137 aaKnown RBP12.4□□□□□ -0.42
ATG4B-221ENST00000483778 TRGV1A0A0A0MS02 117 aa12.39□□□□□ -0.43
ATG4B-221ENST00000483778 CRISP2P16562 243 aa12.39□□□□□ -0.43
ATG4B-221ENST00000483778 EIF4E3Q8N5X7 224 aaKnown RBP12.39□□□□□ -0.43
ATG4B-221ENST00000483778 OR5C1Q8NGR4 320 aa12.39□□□□□ -0.43
ATG4B-221ENST00000483778 LINC00467Q9BRT7 94 aa12.39□□□□□ -0.43
ATG4B-221ENST00000483778 NDUFA13Q9P0J0 144 aa12.39□□□□□ -0.43
ATG4B-221ENST00000483778 FUT9Q9Y231 359 aa12.39□□□□□ -0.43
ATG4B-221ENST00000483778 TRGV2A0A075B6R0 118 aa12.38□□□□□ -0.43
ATG4B-221ENST00000483778 SPINK4O60575 86 aa12.38□□□□□ -0.43
ATG4B-221ENST00000483778 GPX1P07203 203 aa12.38□□□□□ -0.43
ATG4B-221ENST00000483778 NBEAP1P0C6P0 100 aa12.38□□□□□ -0.43
ATG4B-221ENST00000483778 ASAH1Q13510 395 aa12.38□□□□□ -0.43
ATG4B-221ENST00000483778 PDE6HQ13956 83 aa12.38□□□□□ -0.43
ATG4B-221ENST00000483778 ANXA2RQ3ZCQ2 193 aa12.38□□□□□ -0.43
ATG4B-221ENST00000483778 MPDU1O75352 247 aa12.37□□□□□ -0.43
ATG4B-221ENST00000483778 CDK2AP2O75956 126 aa12.37□□□□□ -0.43
ATG4B-221ENST00000483778 IGHV3-53P01767 116 aa12.37□□□□□ -0.43
ATG4B-221ENST00000483778 OR10J4P0C629 311 aa12.37□□□□□ -0.43
ATG4B-221ENST00000483778 TCL1AP56279 114 aa12.37□□□□□ -0.43
ATG4B-221ENST00000483778 IFITM3Q01628 133 aa12.37□□□□□ -0.43
ATG4B-221ENST00000483778 LRRC37A5PQ49AS3 106 aa12.37□□□□□ -0.43
ATG4B-221ENST00000483778 FXYD5Q96DB9 178 aa12.37□□□□□ -0.43
ATG4B-221ENST00000483778 OR51M1Q9H341 326 aa12.37□□□□□ -0.43
ATG4B-221ENST00000483778 MRPL16Q9NX20 251 aaKnown RBP12.37□□□□□ -0.43
ATG4B-221ENST00000483778 MZT2BQ6NZ67 158 aa12.36□□□□□ -0.43
ATG4B-221ENST00000483778 ZNF680Q8NEM1 530 aa12.36□□□□□ -0.43
ATG4B-221ENST00000483778 Q8TAT8 98 aa12.36□□□□□ -0.43
ATG4B-221ENST00000483778 PHYHIPLQ96FC7 376 aa12.36□□□□□ -0.43
ATG4B-221ENST00000483778 C18orf15Q96N68 181 aa12.36□□□□□ -0.43
ATG4B-221ENST00000483778 ZNF492Q9P255 531 aa12.36□□□□□ -0.43
ATG4B-221ENST00000483778 TNFRSF18Q9Y5U5 241 aa12.36□□□□□ -0.43
ATG4B-221ENST00000483778 EIF3GO75821 320 aaKnown RBP eCLIP12.35□□□□□ -0.43
ATG4B-221ENST00000483778 FUSP35637 526 aaKnown RBP eCLIP12.35□□□□□ -0.43
ATG4B-221ENST00000483778 MAPKAPK5-AS1Q8N8E1 139 aa12.35□□□□□ -0.43
ATG4B-221ENST00000483778 PAXXQ9BUH6 204 aa12.35□□□□□ -0.43
ATG4B-221ENST00000483778 AAMDCQ9H7C9 122 aa12.35□□□□□ -0.43
ATG4B-221ENST00000483778 TTC32Q5I0X7 151 aa12.34□□□□□ -0.43
ATG4B-221ENST00000483778 TMEM78Q5T7P6 136 aa12.34□□□□□ -0.43
ATG4B-221ENST00000483778 Q6ZRN7 208 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-221ENST00000483778 WDR61Q9GZS3 305 aaKnown RBP12.34□□□□□ -0.43
ATG4B-221ENST00000483778 APOBP04114 4563 aaKnown RBP12.33□□□□□ -0.44
ATG4B-221ENST00000483778 IGHV1OR15-1A0A075B7D0 117 aa12.33□□□□□ -0.44
ATG4B-221ENST00000483778 E5RGE8 158 aa12.33□□□□□ -0.44
ATG4B-221ENST00000483778 RGS13O14921 159 aa12.33□□□□□ -0.44
ATG4B-221ENST00000483778 PAX4O43316 350 aa12.33□□□□□ -0.44
ATG4B-221ENST00000483778 NMBP08949 121 aa12.33□□□□□ -0.44
ATG4B-221ENST00000483778 H2BFSP57053 126 aa12.33□□□□□ -0.44
ATG4B-221ENST00000483778 LINC00315P59091 139 aa12.33□□□□□ -0.44
ATG4B-221ENST00000483778 FHL2Q14192 279 aa12.33□□□□□ -0.44
ATG4B-221ENST00000483778 NMES1Q9C002 83 aa12.33□□□□□ -0.44
ATG4B-221ENST00000483778 SLC25A31Q9H0C2 315 aa12.33□□□□□ -0.44
ATG4B-221ENST00000483778 MDFICQ9P1T7 246 aa12.33□□□□□ -0.44
ATG4B-221ENST00000483778 A0A1W2PPQ1 181 aa12.32□□□□□ -0.44
ATG4B-221ENST00000483778 PRAF2O60831 178 aa12.32□□□□□ -0.44
ATG4B-221ENST00000483778 ZNF138P52744 262 aa12.32□□□□□ -0.44
ATG4B-221ENST00000483778 RANP62826 216 aaKnown RBP12.32□□□□□ -0.44
ATG4B-221ENST00000483778 MUC21Q5SSG8 566 aa12.32□□□□□ -0.44
ATG4B-221ENST00000483778 IBA57Q5T440 356 aaKnown RBP12.32□□□□□ -0.44
ATG4B-221ENST00000483778 ST6GAL2Q96JF0 529 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms