RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 RAB4BP61018 213 aa13.15□□□□□ -0.3
MRPL28-210ENST00000483764 DEFA6Q01524 100 aa13.15□□□□□ -0.3
MRPL28-210ENST00000483764 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.15□□□□□ -0.3
MRPL28-210ENST00000483764 C11orf44Q8N8P7 122 aa13.15□□□□□ -0.3
MRPL28-210ENST00000483764 NUP35Q8NFH5 326 aa13.15□□□□□ -0.3
MRPL28-210ENST00000483764 MRPS12O15235 138 aaKnown RBP13.14□□□□□ -0.31
MRPL28-210ENST00000483764 RBPMS2Q6ZRY4 209 aaKnown RBP13.14□□□□□ -0.31
MRPL28-210ENST00000483764 TMEM256Q8N2U0 113 aa13.14□□□□□ -0.31
MRPL28-210ENST00000483764 ZFAND3Q9H8U3 227 aa13.14□□□□□ -0.31
MRPL28-210ENST00000483764 C2CD3Q4AC94 2353 aa13.14□□□□□ -0.31
MRPL28-210ENST00000483764 JMJD1CQ15652 2540 aa13.14□□□□□ -0.31
MRPL28-210ENST00000483764 A0A1B0GXF2 115 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 HIGD1CA8MV81 97 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 NDUFA4O00483 81 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 FOXA3P55318 350 aaPredicted RBP13.13□□□□□ -0.31
MRPL28-210ENST00000483764 TCL1AP56279 114 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 HBBP68871 147 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 KLF5Q13887 457 aaPredicted RBP13.13□□□□□ -0.31
MRPL28-210ENST00000483764 LBHQ53QV2 105 aaPredicted RBP13.13□□□□□ -0.31
MRPL28-210ENST00000483764 SIGLEC15Q6ZMC9 328 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 C18orf65Q6ZTR6 163 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 C4orf3Q8WVX3 66 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 NEU1Q99519 415 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 RABAC1Q9UI14 185 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 IGHV3OR16-8A0A075B7F1 116 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 SERF1AO75920 110 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 RAB4AP20338 218 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 PRR27Q6MZM9 219 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 MRPL54Q6P161 138 aaKnown RBP13.13□□□□□ -0.31
MRPL28-210ENST00000483764 C16orf54Q6UWD8 224 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 NHLRC2Q8NBF2 726 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 KCNS1Q96KK3 526 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 CITED2Q99967 270 aaPredicted RBP13.13□□□□□ -0.31
MRPL28-210ENST00000483764 SAMD10Q9BYL1 202 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 NAGKQ9UJ70 344 aa13.13□□□□□ -0.31
MRPL28-210ENST00000483764 SETD2Q9BYW2 2564 aaPredicted RBP13.12□□□□□ -0.31
MRPL28-210ENST00000483764 GRIFINA4D1Z8 144 aa13.12□□□□□ -0.31
MRPL28-210ENST00000483764 DDTP30046 118 aa13.12□□□□□ -0.31
MRPL28-210ENST00000483764 PSG3Q16557 428 aa13.12□□□□□ -0.31
MRPL28-210ENST00000483764 LEMD1Q68G75 181 aa13.12□□□□□ -0.31
MRPL28-210ENST00000483764 HIST2H2BDQ6DRA6 164 aa13.12□□□□□ -0.31
MRPL28-210ENST00000483764 COX8CQ7Z4L0 72 aa13.12□□□□□ -0.31
MRPL28-210ENST00000483764 GPHB5Q86YW7 130 aa13.12□□□□□ -0.31
MRPL28-210ENST00000483764 KLHL30-AS1Q8NEE0 82 aa13.12□□□□□ -0.31
MRPL28-210ENST00000483764 TSSC4Q9Y5U2 329 aaPredicted RBP13.12□□□□□ -0.31
MRPL28-210ENST00000483764 IGHV4OR15-8A0A075B7B6 117 aa13.11□□□□□ -0.31
MRPL28-210ENST00000483764 A0A087WW49 117 aa13.11□□□□□ -0.31
MRPL28-210ENST00000483764 IGLV2-11P01706 119 aa13.11□□□□□ -0.31
MRPL28-210ENST00000483764 RIPPLY3P57055 190 aa13.11□□□□□ -0.31
MRPL28-210ENST00000483764 FAM106AQ4KMX7 169 aa13.11□□□□□ -0.31
MRPL28-210ENST00000483764 SAPCD1Q5SSQ6 148 aa13.11□□□□□ -0.31
MRPL28-210ENST00000483764 GOLT1AQ6ZVE7 132 aa13.11□□□□□ -0.31
MRPL28-210ENST00000483764 TP53TG3Q9ULZ0 132 aa13.11□□□□□ -0.31
MRPL28-210ENST00000483764 RPH3ALQ9UNE2 315 aa13.11□□□□□ -0.31
MRPL28-210ENST00000483764 A8MWP6 167 aa13.1□□□□□ -0.31
MRPL28-210ENST00000483764 DIRC3C9JPN6 131 aa13.1□□□□□ -0.31
MRPL28-210ENST00000483764 SCGB1D1O95968 90 aa13.1□□□□□ -0.31
MRPL28-210ENST00000483764 GPX1P07203 203 aa13.1□□□□□ -0.31
MRPL28-210ENST00000483764 CT45A10P0DMU9 189 aa13.1□□□□□ -0.31
MRPL28-210ENST00000483764 DEFB136Q30KP8 78 aa13.1□□□□□ -0.31
MRPL28-210ENST00000483764 C1orf194Q5T5A4 169 aa13.1□□□□□ -0.31
MRPL28-210ENST00000483764 UNQ9165/PRO28630Q6UXU0 137 aa13.1□□□□□ -0.31
MRPL28-210ENST00000483764 REC114Q7Z4M0 266 aa13.1□□□□□ -0.31
MRPL28-210ENST00000483764 SRIP30626 198 aa13.09□□□□□ -0.31
MRPL28-210ENST00000483764 OR11H1Q8NG94 326 aa13.09□□□□□ -0.31
MRPL28-210ENST00000483764 OR1N2Q8NGR9 330 aa13.09□□□□□ -0.31
MRPL28-210ENST00000483764 DPF1Q92782 380 aa13.09□□□□□ -0.31
MRPL28-210ENST00000483764 METTL26Q96S19 204 aa13.09□□□□□ -0.31
MRPL28-210ENST00000483764 CLEC5AQ9NY25 188 aa13.09□□□□□ -0.31
MRPL28-210ENST00000483764 PSG8Q9UQ74 426 aa13.09□□□□□ -0.31
MRPL28-210ENST00000483764 A0A087X0K7 114 aa13.08□□□□□ -0.31
MRPL28-210ENST00000483764 A0A1W2PRX2 142 aa13.08□□□□□ -0.31
MRPL28-210ENST00000483764 LINC01619G3V211 115 aa13.08□□□□□ -0.31
MRPL28-210ENST00000483764 ZNF207O43670 478 aaKnown RBP13.08□□□□□ -0.31
MRPL28-210ENST00000483764 HOXD3P31249 432 aaPredicted RBP13.08□□□□□ -0.31
MRPL28-210ENST00000483764 KRTAP10-3P60369 221 aa13.08□□□□□ -0.31
MRPL28-210ENST00000483764 CDPF1Q6NVV7 123 aa13.08□□□□□ -0.31
MRPL28-210ENST00000483764 C8orf86Q6ZUL3 223 aa13.08□□□□□ -0.31
MRPL28-210ENST00000483764 PRNTQ86SH4 94 aa13.08□□□□□ -0.31
MRPL28-210ENST00000483764 EXOC3-AS1Q8N2X6 119 aa13.08□□□□□ -0.31
MRPL28-210ENST00000483764 SPINK4O60575 86 aa13.08□□□□□ -0.32
MRPL28-210ENST00000483764 ZNF324O75467 553 aaPredicted RBP13.08□□□□□ -0.32
MRPL28-210ENST00000483764 CA1P00915 261 aaPredicted RBP13.08□□□□□ -0.32
MRPL28-210ENST00000483764 LINC00310P59036 64 aa13.08□□□□□ -0.32
MRPL28-210ENST00000483764 RPS20P60866 119 aaKnown RBP13.08□□□□□ -0.32
MRPL28-210ENST00000483764 RIGQ13278 110 aa13.08□□□□□ -0.32
MRPL28-210ENST00000483764 MRPL52Q86TS9 123 aaKnown RBP13.08□□□□□ -0.32
MRPL28-210ENST00000483764 PRIMA1Q86XR5 153 aa13.08□□□□□ -0.32
MRPL28-210ENST00000483764 GATD1Q8NB37 220 aa13.08□□□□□ -0.32
MRPL28-210ENST00000483764 BORCS7Q96B45 105 aa13.07□□□□□ -0.32
MRPL28-210ENST00000483764 K7EMT4 169 aa13.06□□□□□ -0.32
MRPL28-210ENST00000483764 NUPR1O60356 82 aa13.06□□□□□ -0.32
MRPL28-210ENST00000483764 PMCHP20382 165 aa13.06□□□□□ -0.32
MRPL28-210ENST00000483764 SYNJ2BPP57105 145 aa13.06□□□□□ -0.32
MRPL28-210ENST00000483764 KRTAP24-1Q3LI83 254 aa13.06□□□□□ -0.32
MRPL28-210ENST00000483764 ZNF664Q8N3J9 261 aa13.06□□□□□ -0.32
MRPL28-210ENST00000483764 OR2D3Q8NGH3 330 aa13.06□□□□□ -0.32
MRPL28-210ENST00000483764 C18orf32Q8TCD1 76 aa13.06□□□□□ -0.32
MRPL28-210ENST00000483764 DUX3Q96PT4 197 aa13.06□□□□□ -0.32
MRPL28-210ENST00000483764 SLC50A1Q9BRV3 221 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms