RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 HIST1H2BLQ99880 126 aa6.78□□□□□ -1.32
CDC42SE1-204ENST00000483763 HIVEP2P31629 2446 aa6.78□□□□□ -1.32
CDC42SE1-204ENST00000483763 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.77□□□□□ -1.32
CDC42SE1-204ENST00000483763 CBLN1P23435 193 aa6.77□□□□□ -1.32
CDC42SE1-204ENST00000483763 PSMB8P28062 276 aa6.77□□□□□ -1.32
CDC42SE1-204ENST00000483763 RPEL1Q2QD12 228 aa6.77□□□□□ -1.32
CDC42SE1-204ENST00000483763 OR4X2Q8NGF9 303 aa6.77□□□□□ -1.32
CDC42SE1-204ENST00000483763 USMG5Q96IX5 58 aa6.77□□□□□ -1.32
CDC42SE1-204ENST00000483763 YAE1D1Q9NRH1 226 aa6.77□□□□□ -1.32
CDC42SE1-204ENST00000483763 U3KQE9 123 aa6.77□□□□□ -1.32
CDC42SE1-204ENST00000483763 IGKV2-40A0A087WW87 121 aaPredicted RBP6.77□□□□□ -1.33
CDC42SE1-204ENST00000483763 SMIM27A0A1W2PRY6 76 aa6.77□□□□□ -1.33
CDC42SE1-204ENST00000483763 H3BUA1 57 aa6.77□□□□□ -1.33
CDC42SE1-204ENST00000483763 IGKV2D-40P01614 121 aaPredicted RBP6.77□□□□□ -1.33
CDC42SE1-204ENST00000483763 FABP4P15090 132 aa6.77□□□□□ -1.33
CDC42SE1-204ENST00000483763 FAM231DQ6ZW35 169 aa6.77□□□□□ -1.33
CDC42SE1-204ENST00000483763 TMEM183AQ8IXX5 376 aa6.77□□□□□ -1.33
CDC42SE1-204ENST00000483763 PRSS22Q9GZN4 317 aa6.77□□□□□ -1.33
CDC42SE1-204ENST00000483763 ZNF331Q9NQX6 463 aaPredicted RBP6.77□□□□□ -1.33
CDC42SE1-204ENST00000483763 NAGKQ9UJ70 344 aa6.77□□□□□ -1.33
CDC42SE1-204ENST00000483763 SELENOKQ9Y6D0 94 aa6.77□□□□□ -1.33
CDC42SE1-204ENST00000483763 C19orf71A6NCJ1 209 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 GZMBP10144 247 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 EDN2P20800 178 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 CRIP1P50238 77 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 KRTAP1-1Q07627 177 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 PSG3Q16557 428 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 ZNF664Q8N3J9 261 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 RNF182Q8N6D2 247 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 METTL26Q96S19 204 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 ZNF702PQ9H963 129 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 ATRQ13535 2644 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 PRAC2D3DTV9 90 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 K7EP13 123 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 TCF21O43680 179 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 PDZD11Q5EBL8 140 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 COA6Q5JTJ3 125 aaKnown RBP6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 SIGLECL1Q8N7X8 197 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 TMEM75Q8N9X5 138 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 ZC2HC1AQ96GY0 325 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 BTF3L4Q96K17 158 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 VGLL1Q99990 258 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 AAMDCQ9H7C9 122 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 PSG8Q9UQ74 426 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 TRAPPC1Q9Y5R8 145 aa6.76□□□□□ -1.33
CDC42SE1-204ENST00000483763 CHEK1O14757 476 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 CD5LO43866 347 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 RPLP1P05386 114 aaKnown RBP6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 PRR31Q5SQ13 230 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 OR2D3Q8NGH3 330 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 GTSF1Q8WW33 167 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 SMIM12Q96EX1 92 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 C8orf49Q96NF6 230 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 TRAV8-2A0A0B4J237 113 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 A0A1B0GUS0 222 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 INAFM1C9JVW0 142 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 PSG9Q00887 426 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 RNF151Q2KHN1 245 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 LCN12Q6JVE5 192 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 MRPL54Q6P161 138 aaKnown RBP6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 NUP35Q8NFH5 326 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 Q8TAT8 98 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 ZNF580Q9UK33 172 aa6.75□□□□□ -1.33
CDC42SE1-204ENST00000483763 A0A0G2JLM5 398 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 HIGD1CA8MV81 97 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 H0Y8G0 127 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 NDUFA4O00483 81 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 AMBPP02760 352 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 C1orf194Q5T5A4 169 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 HIST2H2BDQ6DRA6 164 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 TCF24Q7RTU0 167 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 GPHB5Q86YW7 130 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 GLMPQ8WWB7 406 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 CITED2Q99967 270 aaPredicted RBP6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 SNHG12Q9BXW3 62 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 TRAV9-1A0A075B6T8 112 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 A0A087X0K7 114 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 TRBV6-1A0A0K0K1D8 114 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 ZNF253O75346 499 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 RPL19P84098 196 aaKnown RBP6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 GDF5OSQ5U4N7 250 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 C8orf86Q6ZUL3 223 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 TEX29Q8N6K0 151 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 TSKUQ8WUA8 353 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 GRAMD2BQ96HH9 432 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 VPS25Q9BRG1 176 aa6.74□□□□□ -1.33
CDC42SE1-204ENST00000483763 COL6A5A8TX70 2615 aa6.73□□□□□ -1.33
CDC42SE1-204ENST00000483763 SNURFLB1AK76 121 aa6.73□□□□□ -1.33
CDC42SE1-204ENST00000483763 NPIPB6E9PJ23 425 aa6.73□□□□□ -1.33
CDC42SE1-204ENST00000483763 M0R143 59 aa6.73□□□□□ -1.33
CDC42SE1-204ENST00000483763 P01737 135 aa6.73□□□□□ -1.33
CDC42SE1-204ENST00000483763 CSN1S1P47710 185 aa6.73□□□□□ -1.33
CDC42SE1-204ENST00000483763 ERCC8Q13216 396 aa6.73□□□□□ -1.33
CDC42SE1-204ENST00000483763 TMEM190Q8WZ59 177 aa6.73□□□□□ -1.33
CDC42SE1-204ENST00000483763 DPF1Q92782 380 aa6.73□□□□□ -1.33
CDC42SE1-204ENST00000483763 NPFFR1Q9GZQ6 430 aa6.73□□□□□ -1.33
CDC42SE1-204ENST00000483763 RPP21Q9H633 154 aaKnown RBP6.73□□□□□ -1.33
CDC42SE1-204ENST00000483763 ZNF492Q9P255 531 aa6.73□□□□□ -1.33
CDC42SE1-204ENST00000483763 PEF1Q9UBV8 284 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms