RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 PLAC8L1A1L4L8 177 aa12.85□□□□□ -0.35
HDAC6-225ENST00000483506 HMSDA8MTL9 139 aa12.85□□□□□ -0.35
HDAC6-225ENST00000483506 KLLNB2CW77 178 aa12.85□□□□□ -0.35
HDAC6-225ENST00000483506 H7BYZ3 331 aa12.85□□□□□ -0.35
HDAC6-225ENST00000483506 IGKV2D-40P01614 121 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-225ENST00000483506 SLC25A5P05141 298 aaKnown RBP12.85□□□□□ -0.35
HDAC6-225ENST00000483506 NMBP08949 121 aa12.85□□□□□ -0.35
HDAC6-225ENST00000483506 CRISP2P16562 243 aa12.85□□□□□ -0.35
HDAC6-225ENST00000483506 EMP1P54849 157 aa12.85□□□□□ -0.35
HDAC6-225ENST00000483506 TCTAP57738 103 aa12.85□□□□□ -0.35
HDAC6-225ENST00000483506 FAM222AQ5U5X8 452 aa12.85□□□□□ -0.35
HDAC6-225ENST00000483506 ARL6IP6Q8N6S5 226 aa12.85□□□□□ -0.35
HDAC6-225ENST00000483506 SUN5Q8TC36 379 aa12.85□□□□□ -0.35
HDAC6-225ENST00000483506 LINC01587Q99440 93 aa12.85□□□□□ -0.35
HDAC6-225ENST00000483506 PRM2P04554 102 aa12.84□□□□□ -0.35
HDAC6-225ENST00000483506 ARL14EPLP0DKL9 152 aa12.84□□□□□ -0.35
HDAC6-225ENST00000483506 CSN1S1P47710 185 aa12.84□□□□□ -0.35
HDAC6-225ENST00000483506 OR11H4Q8NGC9 324 aa12.84□□□□□ -0.35
HDAC6-225ENST00000483506 LINC00476Q8WZB0 136 aa12.84□□□□□ -0.35
HDAC6-225ENST00000483506 RAB24Q969Q5 203 aa12.84□□□□□ -0.35
HDAC6-225ENST00000483506 VGLL1Q99990 258 aa12.84□□□□□ -0.35
HDAC6-225ENST00000483506 OTORQ9NRC9 128 aa12.84□□□□□ -0.35
HDAC6-225ENST00000483506 AZU1P20160 251 aa12.83□□□□□ -0.36
HDAC6-225ENST00000483506 TMEM78Q5T7P6 136 aa12.83□□□□□ -0.36
HDAC6-225ENST00000483506 ZNF767PQ75MW2 155 aa12.83□□□□□ -0.36
HDAC6-225ENST00000483506 KCNRGQ8N5I3 272 aa12.83□□□□□ -0.36
HDAC6-225ENST00000483506 RXFP4Q8TDU9 374 aa12.83□□□□□ -0.36
HDAC6-225ENST00000483506 NIPSNAP3BQ9BS92 247 aa12.83□□□□□ -0.36
HDAC6-225ENST00000483506 ZNF492Q9P255 531 aa12.83□□□□□ -0.36
HDAC6-225ENST00000483506 LYRM9A8MSI8 78 aa12.82□□□□□ -0.36
HDAC6-225ENST00000483506 DIRC3C9JPN6 131 aa12.82□□□□□ -0.36
HDAC6-225ENST00000483506 HMGB3O15347 200 aaKnown RBP12.82□□□□□ -0.36
HDAC6-225ENST00000483506 ZNF493Q6ZR52 646 aa12.82□□□□□ -0.36
HDAC6-225ENST00000483506 ZFAND2AQ8N6M9 145 aa12.82□□□□□ -0.36
HDAC6-225ENST00000483506 RNASE8Q8TDE3 154 aaKnown RBP12.82□□□□□ -0.36
HDAC6-225ENST00000483506 TMEM263Q8WUH6 116 aaKnown RBP12.82□□□□□ -0.36
HDAC6-225ENST00000483506 C16orf74Q96GX8 76 aa12.82□□□□□ -0.36
HDAC6-225ENST00000483506 ACTR3CQ9C0K3 210 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-225ENST00000483506 DEFB131BA0A096LNP1 70 aa12.81□□□□□ -0.36
HDAC6-225ENST00000483506 C7orf71A4D174 169 aa12.81□□□□□ -0.36
HDAC6-225ENST00000483506 ZNF138P52744 262 aa12.81□□□□□ -0.36
HDAC6-225ENST00000483506 FAM74A1Q5RGS3 127 aa12.81□□□□□ -0.36
HDAC6-225ENST00000483506 Q6ZNX1 250 aa12.81□□□□□ -0.36
HDAC6-225ENST00000483506 TMED6Q8WW62 240 aa12.81□□□□□ -0.36
HDAC6-225ENST00000483506 ARPC5LQ9BPX5 153 aa12.81□□□□□ -0.36
HDAC6-225ENST00000483506 PYGO2Q9BRQ0 406 aa12.81□□□□□ -0.36
HDAC6-225ENST00000483506 LINC00467Q9BRT7 94 aa12.81□□□□□ -0.36
HDAC6-225ENST00000483506 HYDINQ4G0P3 5121 aa12.81□□□□□ -0.36
HDAC6-225ENST00000483506 TRAV12-3A0A0B4J271 114 aa12.8□□□□□ -0.36
HDAC6-225ENST00000483506 A0A0D9SG52 128 aa12.8□□□□□ -0.36
HDAC6-225ENST00000483506 ZNF324O75467 553 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-225ENST00000483506 CXorf1O96002 111 aa12.8□□□□□ -0.36
HDAC6-225ENST00000483506 GCHFRP30047 84 aa12.8□□□□□ -0.36
HDAC6-225ENST00000483506 SSX7Q7RTT5 188 aa12.8□□□□□ -0.36
HDAC6-225ENST00000483506 APLNQ9ULZ1 77 aa12.8□□□□□ -0.36
HDAC6-225ENST00000483506 LENEPQ9Y5L5 61 aa12.8□□□□□ -0.36
HDAC6-225ENST00000483506 CTXND1A0A1B0GTU2 59 aa12.79□□□□□ -0.36
HDAC6-225ENST00000483506 PGPA6NDG6 321 aa12.79□□□□□ -0.36
HDAC6-225ENST00000483506 J3KRW8 73 aa12.79□□□□□ -0.36
HDAC6-225ENST00000483506 CD300CQ08708 224 aa12.79□□□□□ -0.36
HDAC6-225ENST00000483506 ZNF726P1Q15940 193 aa12.79□□□□□ -0.36
HDAC6-225ENST00000483506 CMTM2Q8TAZ6 248 aa12.79□□□□□ -0.36
HDAC6-225ENST00000483506 ST6GAL2Q96JF0 529 aa12.79□□□□□ -0.36
HDAC6-225ENST00000483506 TMEM167BQ9NRX6 74 aa12.79□□□□□ -0.36
HDAC6-225ENST00000483506 IGLL5B9A064 214 aa12.78□□□□□ -0.36
HDAC6-225ENST00000483506 BTN1A1Q13410 526 aa12.78□□□□□ -0.36
HDAC6-225ENST00000483506 AKR1C8PQ5T2L2 129 aa12.78□□□□□ -0.36
HDAC6-225ENST00000483506 PRR9Q5T870 116 aa12.78□□□□□ -0.36
HDAC6-225ENST00000483506 LGALS9CQ6DKI2 356 aa12.78□□□□□ -0.36
HDAC6-225ENST00000483506 Q8TAT8 98 aa12.78□□□□□ -0.36
HDAC6-225ENST00000483506 PLA2G2EQ9NZK7 142 aa12.78□□□□□ -0.36
HDAC6-225ENST00000483506 TIMM8BQ9Y5J9 83 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-225ENST00000483506 VPS13DQ5THJ4 4388 aa12.78□□□□□ -0.36
HDAC6-225ENST00000483506 KMT2AQ03164 3969 aa12.77□□□□□ -0.36
HDAC6-225ENST00000483506 IGHV4-4A0A075B6R2 117 aa12.77□□□□□ -0.37
HDAC6-225ENST00000483506 BCL2L11O43521 198 aa12.77□□□□□ -0.37
HDAC6-225ENST00000483506 GPX1P07203 203 aa12.77□□□□□ -0.37
HDAC6-225ENST00000483506 HTN1P15515 57 aa12.77□□□□□ -0.37
HDAC6-225ENST00000483506 DAD1P61803 113 aa12.77□□□□□ -0.37
HDAC6-225ENST00000483506 CCDC28AQ8IWP9 274 aa12.77□□□□□ -0.37
HDAC6-225ENST00000483506 TCTE3Q8IZS6 198 aa12.77□□□□□ -0.37
HDAC6-225ENST00000483506 FAM210BQ96KR6 192 aa12.77□□□□□ -0.37
HDAC6-225ENST00000483506 HYLS1Q96M11 299 aa12.77□□□□□ -0.37
HDAC6-225ENST00000483506 SERTM2A0A1B0GWG4 89 aa12.76□□□□□ -0.37
HDAC6-225ENST00000483506 RNASE4P34096 147 aaKnown RBP12.76□□□□□ -0.37
HDAC6-225ENST00000483506 LINC00612Q8N6U2 182 aa12.76□□□□□ -0.37
HDAC6-225ENST00000483506 C5orf17Q8NAS9 161 aa12.76□□□□□ -0.37
HDAC6-225ENST00000483506 A0A1W2PRE2 83 aa12.75□□□□□ -0.37
HDAC6-225ENST00000483506 LY6G6CO95867 125 aa12.75□□□□□ -0.37
HDAC6-225ENST00000483506 SEC11BP0C7V7 166 aa12.75□□□□□ -0.37
HDAC6-225ENST00000483506 ANXA2RQ3ZCQ2 193 aa12.75□□□□□ -0.37
HDAC6-225ENST00000483506 GOLT1AQ6ZVE7 132 aa12.75□□□□□ -0.37
HDAC6-225ENST00000483506 DNAH6Q9C0G6 4158 aa12.74□□□□□ -0.37
HDAC6-225ENST00000483506 KANTRA0A1W2PQU2 76 aa12.74□□□□□ -0.37
HDAC6-225ENST00000483506 GGTLC3B5MD39 225 aa12.74□□□□□ -0.37
HDAC6-225ENST00000483506 Q6AWC8 147 aa12.74□□□□□ -0.37
HDAC6-225ENST00000483506 EIF4E3Q8N5X7 224 aaKnown RBP12.74□□□□□ -0.37
HDAC6-225ENST00000483506 C11orf72Q8NBR9 251 aa12.74□□□□□ -0.37
HDAC6-225ENST00000483506 ZNF680Q8NEM1 530 aa12.74□□□□□ -0.37
HDAC6-225ENST00000483506 NOP10Q9NPE3 64 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms