RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 IGFBPL1Q8WX77 278 aa6.16□□□□□ -1.42
COL4A5-205ENST00000483338 FLYWCH2Q96CP2 140 aaKnown RBP6.16□□□□□ -1.42
COL4A5-205ENST00000483338 FMC1Q96HJ9 113 aa6.16□□□□□ -1.42
COL4A5-205ENST00000483338 CHCHD2Q9Y6H1 151 aaPredicted RBP6.16□□□□□ -1.42
COL4A5-205ENST00000483338 PROP1O75360 226 aa6.16□□□□□ -1.42
COL4A5-205ENST00000483338 ORM1P02763 201 aa6.16□□□□□ -1.42
COL4A5-205ENST00000483338 EBI3Q14213 229 aa6.16□□□□□ -1.42
COL4A5-205ENST00000483338 MRPL51Q4U2R6 128 aaKnown RBP6.16□□□□□ -1.42
COL4A5-205ENST00000483338 AAED1Q7RTV5 226 aa6.16□□□□□ -1.42
COL4A5-205ENST00000483338 MRPS12O15235 138 aaKnown RBP6.15□□□□□ -1.42
COL4A5-205ENST00000483338 FSTL3O95633 263 aa6.15□□□□□ -1.42
COL4A5-205ENST00000483338 PLAUP00749 431 aa6.15□□□□□ -1.42
COL4A5-205ENST00000483338 CRYGBP07316 175 aa6.15□□□□□ -1.42
COL4A5-205ENST00000483338 C3orf36Q3SXR2 165 aa6.15□□□□□ -1.42
COL4A5-205ENST00000483338 PATE2Q6UY27 113 aa6.15□□□□□ -1.42
COL4A5-205ENST00000483338 SIGLEC15Q6ZMC9 328 aa6.15□□□□□ -1.42
COL4A5-205ENST00000483338 SLC25A45Q8N413 288 aa6.15□□□□□ -1.42
COL4A5-205ENST00000483338 PRNDQ9UKY0 176 aa6.15□□□□□ -1.42
COL4A5-205ENST00000483338 LGALS9O00182 355 aa6.15□□□□□ -1.43
COL4A5-205ENST00000483338 CXCL13O43927 109 aa6.15□□□□□ -1.43
COL4A5-205ENST00000483338 CD3EP07766 207 aa6.15□□□□□ -1.43
COL4A5-205ENST00000483338 ZNF134P52741 427 aa6.15□□□□□ -1.43
COL4A5-205ENST00000483338 SEC61GP60059 68 aa6.15□□□□□ -1.43
COL4A5-205ENST00000483338 PMVKQ15126 192 aa6.15□□□□□ -1.43
COL4A5-205ENST00000483338 SPTAN1Q13813 2472 aaKnown RBP6.15□□□□□ -1.43
COL4A5-205ENST00000483338 APC2O95996 2303 aa6.15□□□□□ -1.43
COL4A5-205ENST00000483338 IGHV3-43A0A0B4J1X8 118 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 DEFB108AA8MXU0 73 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 IGHV3-43DP0DP04 118 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 RPL13AP40429 203 aaKnown RBP6.14□□□□□ -1.43
COL4A5-205ENST00000483338 SPTBN1Q01082 2364 aaKnown RBP6.14□□□□□ -1.43
COL4A5-205ENST00000483338 CRYGDP07320 174 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 PLGLB1Q02325 96 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 GAGE2AQ6NT46 116 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 Q86TA4 180 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 RNF138Q8WVD3 245 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 DPH3Q96FX2 82 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 IGHV1OR21-1A0A087WYE8 117 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 C15orf61A6NNL5 157 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 ATP5LO75964 103 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 NDUFA3O95167 84 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 TCRAP04437 139 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 IL11RAQ14626 422 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 GUSBP11Q6P575 273 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 MRPL20Q9BYC9 149 aaKnown RBP6.14□□□□□ -1.43
COL4A5-205ENST00000483338 CYSTM1Q9H1C7 97 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 PCNX1Q96RV3 2341 aa6.14□□□□□ -1.43
COL4A5-205ENST00000483338 OVOL1O14753 267 aa6.13□□□□□ -1.43
COL4A5-205ENST00000483338 COX7A2P2O60397 106 aa6.13□□□□□ -1.43
COL4A5-205ENST00000483338 NGFP01138 241 aa6.13□□□□□ -1.43
COL4A5-205ENST00000483338 ERVK-16P61578 105 aa6.13□□□□□ -1.43
COL4A5-205ENST00000483338 C10orf113Q5VZT2 155 aa6.13□□□□□ -1.43
COL4A5-205ENST00000483338 CKS2P33552 79 aa6.13□□□□□ -1.43
COL4A5-205ENST00000483338 PRDM14Q9GZV8 571 aa6.13□□□□□ -1.43
COL4A5-205ENST00000483338 LINC00527Q9UJ94 153 aa6.13□□□□□ -1.43
COL4A5-205ENST00000483338 SPTBN5Q9NRC6 3674 aaKnown RBP6.13□□□□□ -1.43
COL4A5-205ENST00000483338 H3BTX0 84 aa6.13□□□□□ -1.43
COL4A5-205ENST00000483338 IGHV3-13P01766 116 aa6.13□□□□□ -1.43
COL4A5-205ENST00000483338 PLEKHB2Q96CS7 222 aa6.13□□□□□ -1.43
COL4A5-205ENST00000483338 ZNF714Q96N38 554 aa6.13□□□□□ -1.43
COL4A5-205ENST00000483338 RTL8AQ9BWD3 113 aa6.13□□□□□ -1.43
COL4A5-205ENST00000483338 ACACAQ13085 2346 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 LINC01546A6NGU7 62 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 INS-IGF2F8WCM5 200 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 GAS8-AS1O95177 125 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 IGLV2-11P01706 119 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 CFC1BP0CG36 223 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 CFC1P0CG37 223 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 FKBP2P26885 142 aaKnown RBP6.12□□□□□ -1.43
COL4A5-205ENST00000483338 DTX2Q86UW9 622 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 MDP1Q86V88 176 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 SAP25Q8TEE9 199 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 PKDREJQ9NTG1 2253 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 CADP27708 2225 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 TINCRA0A1B0GVN0 87 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 PSPNO60542 156 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 PRNTQ86SH4 94 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 TMEM14BQ9NUH8 114 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 MED13LQ71F56 2210 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 CRYGAP11844 174 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 MRPL14Q6P1L8 145 aaKnown RBP6.12□□□□□ -1.43
COL4A5-205ENST00000483338 LYZL1Q6UWQ5 148 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 RPS19BP1Q86WX3 136 aaKnown RBP6.12□□□□□ -1.43
COL4A5-205ENST00000483338 DEFB124Q8NES8 71 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 PRSS33Q8NF86 280 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 PRO0628Q9UI54 55 aa6.12□□□□□ -1.43
COL4A5-205ENST00000483338 H3BMM0 161 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 MRPL33O75394 65 aaKnown RBP6.11□□□□□ -1.43
COL4A5-205ENST00000483338 ZNF883P0CG24 379 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 TCF15Q12870 199 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 MYOZ3Q8TDC0 251 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 UBE2WQ96B02 151 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 JPT2Q9H910 190 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 CTSZQ9UBR2 303 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 FREM1Q5H8C1 2179 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 GRPP07492 148 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 ELANEP08246 267 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 COX7CP15954 63 aa6.11□□□□□ -1.43
COL4A5-205ENST00000483338 ZNF22P17026 224 aaPredicted RBP6.11□□□□□ -1.43
COL4A5-205ENST00000483338 RPL35AP18077 110 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms