RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 IGKV2-40A0A087WW87 121 aaPredicted RBP11.94□□□□□ -0.5
HMGN1-214ENST00000482733 PGPA6NDG6 321 aa11.94□□□□□ -0.5
HMGN1-214ENST00000482733 H7BYZ3 331 aa11.94□□□□□ -0.5
HMGN1-214ENST00000482733 IGKV2D-40P01614 121 aaPredicted RBP11.94□□□□□ -0.5
HMGN1-214ENST00000482733 C1QBP02746 253 aa11.94□□□□□ -0.5
HMGN1-214ENST00000482733 NMBP08949 121 aa11.94□□□□□ -0.5
HMGN1-214ENST00000482733 SEC11BP0C7V7 166 aa11.94□□□□□ -0.5
HMGN1-214ENST00000482733 NANOS2P60321 138 aaKnown RBP11.94□□□□□ -0.5
HMGN1-214ENST00000482733 ERCC8Q13216 396 aa11.94□□□□□ -0.5
HMGN1-214ENST00000482733 HYLS1Q96M11 299 aa11.94□□□□□ -0.5
HMGN1-214ENST00000482733 CSMD3Q7Z407 3707 aa11.94□□□□□ -0.5
HMGN1-214ENST00000482733 TRBV7-9A0A0J9YWB2 115 aa11.93□□□□□ -0.5
HMGN1-214ENST00000482733 TEX48A0A1B0GUV7 120 aa11.93□□□□□ -0.5
HMGN1-214ENST00000482733 LOC102723971A0A1B0GUV8 181 aa11.93□□□□□ -0.5
HMGN1-214ENST00000482733 UMAD1C9J7I0 102 aa11.93□□□□□ -0.5
HMGN1-214ENST00000482733 DIRC3C9JPN6 131 aa11.93□□□□□ -0.5
HMGN1-214ENST00000482733 TAS2R60P59551 318 aa11.93□□□□□ -0.5
HMGN1-214ENST00000482733 GFI1BQ5VTD9 330 aa11.93□□□□□ -0.5
HMGN1-214ENST00000482733 FAM19A4Q96LR4 140 aa11.93□□□□□ -0.5
HMGN1-214ENST00000482733 VGLL1Q99990 258 aa11.93□□□□□ -0.5
HMGN1-214ENST00000482733 ZNF492Q9P255 531 aa11.93□□□□□ -0.5
HMGN1-214ENST00000482733 KMT2CQ8NEZ4 4911 aaKnown RBP11.93□□□□□ -0.5
HMGN1-214ENST00000482733 DYNC2H1Q8NCM8 4307 aaKnown RBP11.92□□□□□ -0.5
HMGN1-214ENST00000482733 SPART-AS1P0CW21 52 aa11.92□□□□□ -0.5
HMGN1-214ENST00000482733 TPT1P13693 172 aaKnown RBP11.92□□□□□ -0.5
HMGN1-214ENST00000482733 CRISP2P16562 243 aa11.92□□□□□ -0.5
HMGN1-214ENST00000482733 ZNF138P52744 262 aa11.92□□□□□ -0.5
HMGN1-214ENST00000482733 ZNF726P1Q15940 193 aa11.92□□□□□ -0.5
HMGN1-214ENST00000482733 CEMP1Q6PRD7 247 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-214ENST00000482733 SSX7Q7RTT5 188 aa11.92□□□□□ -0.5
HMGN1-214ENST00000482733 PHLDA1Q8WV24 401 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-214ENST00000482733 NIPSNAP3BQ9BS92 247 aa11.92□□□□□ -0.5
HMGN1-214ENST00000482733 KLK5Q9Y337 293 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-214ENST00000482733 ZNF705GA8MUZ8 300 aaPredicted RBP11.91□□□□□ -0.5
HMGN1-214ENST00000482733 KLLNB2CW77 178 aa11.91□□□□□ -0.5
HMGN1-214ENST00000482733 C11orf94C9JXX5 98 aa11.91□□□□□ -0.5
HMGN1-214ENST00000482733 EMP1P54849 157 aa11.91□□□□□ -0.5
HMGN1-214ENST00000482733 IQCF2Q8IXL9 164 aa11.91□□□□□ -0.5
HMGN1-214ENST00000482733 STOML3Q8TAV4 291 aa11.91□□□□□ -0.5
HMGN1-214ENST00000482733 TMED6Q8WW62 240 aa11.91□□□□□ -0.5
HMGN1-214ENST00000482733 PLECQ15149 4684 aaKnown RBP11.9□□□□□ -0.5
HMGN1-214ENST00000482733 SERTM2A0A1B0GWG4 89 aa11.9□□□□□ -0.5
HMGN1-214ENST00000482733 C7orf71A4D174 169 aa11.9□□□□□ -0.5
HMGN1-214ENST00000482733 J3KRW8 73 aa11.9□□□□□ -0.5
HMGN1-214ENST00000482733 GPX1P07203 203 aa11.9□□□□□ -0.5
HMGN1-214ENST00000482733 KIR3DS1Q14943 382 aa11.9□□□□□ -0.5
HMGN1-214ENST00000482733 LGALSLQ3ZCW2 172 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-214ENST00000482733 DPPA3Q6W0C5 159 aa11.9□□□□□ -0.5
HMGN1-214ENST00000482733 ZNF493Q6ZR52 646 aa11.9□□□□□ -0.5
HMGN1-214ENST00000482733 C5orf17Q8NAS9 161 aa11.9□□□□□ -0.5
HMGN1-214ENST00000482733 LENEPQ9Y5L5 61 aa11.9□□□□□ -0.5
HMGN1-214ENST00000482733 TRAV12-3A0A0B4J271 114 aa11.89□□□□□ -0.51
HMGN1-214ENST00000482733 A0A1W2PRE2 83 aa11.89□□□□□ -0.51
HMGN1-214ENST00000482733 MAP1LC3B2A6NCE7 125 aa11.89□□□□□ -0.51
HMGN1-214ENST00000482733 EIF5AL1Q6IS14 154 aaKnown RBP11.89□□□□□ -0.51
HMGN1-214ENST00000482733 CCDC28AQ8IWP9 274 aa11.89□□□□□ -0.51
HMGN1-214ENST00000482733 C16orf74Q96GX8 76 aa11.89□□□□□ -0.51
HMGN1-214ENST00000482733 PYGO2Q9BRQ0 406 aa11.89□□□□□ -0.51
HMGN1-214ENST00000482733 MAP1LC3BQ9GZQ8 125 aa11.89□□□□□ -0.51
HMGN1-214ENST00000482733 DKK2Q9UBU2 259 aa11.89□□□□□ -0.51
HMGN1-214ENST00000482733 CELA1Q9UNI1 258 aa11.89□□□□□ -0.51
HMGN1-214ENST00000482733 YTHDF2Q9Y5A9 579 aaKnown RBP11.89□□□□□ -0.51
HMGN1-214ENST00000482733 K7EQM0 130 aa11.88□□□□□ -0.51
HMGN1-214ENST00000482733 HTN1P15515 57 aa11.88□□□□□ -0.51
HMGN1-214ENST00000482733 C12orf74Q32Q52 190 aa11.88□□□□□ -0.51
HMGN1-214ENST00000482733 FAM222AQ5U5X8 452 aa11.88□□□□□ -0.51
HMGN1-214ENST00000482733 GOLT1AQ6ZVE7 132 aa11.88□□□□□ -0.51
HMGN1-214ENST00000482733 ZFAND2AQ8N6M9 145 aa11.88□□□□□ -0.51
HMGN1-214ENST00000482733 NKX6-2Q9C056 277 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-214ENST00000482733 RPH3ALQ9UNE2 315 aa11.88□□□□□ -0.51
HMGN1-214ENST00000482733 TRAV10A0A0B4J240 114 aa11.87□□□□□ -0.51
HMGN1-214ENST00000482733 LYRM9A8MSI8 78 aa11.87□□□□□ -0.51
HMGN1-214ENST00000482733 RNASE4P34096 147 aaKnown RBP11.87□□□□□ -0.51
HMGN1-214ENST00000482733 SUMO1P63165 101 aaKnown RBP11.87□□□□□ -0.51
HMGN1-214ENST00000482733 Q6ZTC4 211 aa11.87□□□□□ -0.51
HMGN1-214ENST00000482733 Q8TAT8 98 aa11.87□□□□□ -0.51
HMGN1-214ENST00000482733 TMEM263Q8WUH6 116 aaKnown RBP11.87□□□□□ -0.51
HMGN1-214ENST00000482733 FBLL1A6NHQ2 334 aaKnown RBP11.86□□□□□ -0.51
HMGN1-214ENST00000482733 GGTLC3B5MD39 225 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 ZNF324O75467 553 aaPredicted RBP11.86□□□□□ -0.51
HMGN1-214ENST00000482733 TCRAP04437 139 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 PRM2P04554 102 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 AZU1P20160 251 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 FHITP49789 147 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 FGF8P55075 233 aaPredicted RBP11.86□□□□□ -0.51
HMGN1-214ENST00000482733 GNG5P63218 68 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 CD300CQ08708 224 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 BTN1A1Q13410 526 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 ZFP69Q49AA0 526 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 SLC51BQ86UW2 128 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 FAM213BQ8TBF2 198 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 C2CD4CQ8TF44 421 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 MBD3L1Q8WWY6 194 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 LINC00467Q9BRT7 94 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 TMPRSS5Q9H3S3 457 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 PLA2G2EQ9NZK7 142 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 EPDR1Q9UM22 224 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 SACSQ9NZJ4 4579 aa11.86□□□□□ -0.51
HMGN1-214ENST00000482733 RAB5CP51148 216 aa11.85□□□□□ -0.51
HMGN1-214ENST00000482733 RNASE8Q8TDE3 154 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms