RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 KIAA2026Q5HYC2 2103 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 NLRP1Q9C000 1473 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 FAM24AA6NFZ4 105 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 ZFP92A6NM28 416 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 C19orf84I3L1E1 186 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 K7ERS5 55 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 TIMM17BO60830 172 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 SNCGO76070 127 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 P0C879 139 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 COX6A1P12074 109 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 DEFA4P12838 97 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 KRTAP10-5P60370 271 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 SYCNQ0VAF6 134 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 FUT5Q11128 374 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 Q8N976 141 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 CCL4L1Q8NHW4 92 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 SCGB3A1Q96QR1 104 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 DEFB126Q9BYW3 111 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 RPP21Q9H633 154 aaKnown RBP2.74□□□□□ -1.97
VPS41-212ENST00000482217 LINC00574Q9H8X3 128 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 OR5V1Q9UGF6 321 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 MADDQ8WXG6 1647 aa2.74□□□□□ -1.97
VPS41-212ENST00000482217 PLXNA2O75051 1894 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 TOPAZ1Q8N9V7 1692 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 COL2A1P02458 1487 aaPredicted RBP2.73□□□□□ -1.97
VPS41-212ENST00000482217 MLH3Q9UHC1 1453 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 EML5Q05BV3 1969 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 EXPH5Q8NEV8 1989 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 IGLV11-55A0A075B6I3 123 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 ZNF736B4DX44 427 aaPredicted RBP2.73□□□□□ -1.97
VPS41-212ENST00000482217 C11orf94C9JXX5 98 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 H3BMM0 161 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 SLC25A20O43772 301 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 LY6HO94772 140 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 IGHV1-69P01742 117 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 SLC25A16P16260 332 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 CBLN1P23435 193 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 GTF3C1Q12789 2109 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 FAM229BQ4G0N7 80 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 ZNF322Q6U7Q0 402 aaPredicted RBP2.73□□□□□ -1.97
VPS41-212ENST00000482217 SBSPONQ8IVN8 264 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 Q8N8P6 123 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 C1orf64Q8NEQ6 169 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 AQP3Q92482 292 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 UBE2WQ96B02 151 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 AMELYQ99218 206 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 XAGE1AQ9HD64 81 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 TNFRSF19Q9NS68 423 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 U3KQK5 164 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 LCTP09848 1927 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 AGRNO00468 2067 aa2.73□□□□□ -1.97
VPS41-212ENST00000482217 SUPT6HQ7KZ85 1726 aaKnown RBP2.73□□□□□ -1.97
VPS41-212ENST00000482217 PATJQ8NI35 1801 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 ADGRL1O94910 1474 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 RPRD2Q5VT52 1461 aaKnown RBP2.72□□□□□ -1.97
VPS41-212ENST00000482217 IGLV3-12A0A075B6K2 115 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 hADV29S1A0JD25 119 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 HFM1A2PYH4 1435 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 SH2D1AO60880 128 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 HYPMO75409 117 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 PROSCO94903 275 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 IGLV1-51P01701 117 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 PTHLHP12272 177 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 PEBP1P30086 187 aaKnown RBP2.72□□□□□ -1.97
VPS41-212ENST00000482217 FXYD7P58549 80 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 LYZP61626 148 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 C15orf32Q32M92 178 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 C2orf91Q6ZV80 131 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 TSKUQ8WUA8 353 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 CHCHD1Q96BP2 118 aaKnown RBP2.72□□□□□ -1.97
VPS41-212ENST00000482217 S100A16Q96FQ6 103 aaKnown RBP2.72□□□□□ -1.97
VPS41-212ENST00000482217 C16orf74Q96GX8 76 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 IMMP2LQ96T52 175 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 PMCHL2Q9BQD1 86 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 SCN3AQ9NY46 2000 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 NUMA1Q14980 2115 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 UGGT2Q9NYU1 1516 aa2.72□□□□□ -1.97
VPS41-212ENST00000482217 SCAF11Q99590 1463 aaKnown RBP2.71□□□□□ -1.97
VPS41-212ENST00000482217 MYO5CQ9NQX4 1742 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 ABCC8Q09428 1581 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 LAMC3Q9Y6N6 1575 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 THADAQ6YHU6 1953 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 C10orf71Q711Q0 1435 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 IGKV1OR2-108A0A075B7D4 117 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 A6NDX4 124 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 A8MUU9 505 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 F8W1H4 67 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 NUPR1O60356 82 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 CFDP00746 253 aaPredicted RBP2.71□□□□□ -1.98
VPS41-212ENST00000482217 RPL28P46779 137 aaKnown RBP2.71□□□□□ -1.98
VPS41-212ENST00000482217 DSCR10P59022 87 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 SDIM1Q6ZPB5 146 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 Q8IYB0 196 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 Q8N9W7 124 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 Q8NDZ9 215 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 OR2T35Q8NGX2 323 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 SMCR5Q8TEV8 140 aa2.71□□□□□ -1.98
VPS41-212ENST00000482217 RETNLBQ9BQ08 111 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms