RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 TRBV7-1A0A0A6YYK4 115 aa11.89□□□□□ -0.51
C9orf3-218ENST00000482056 LOXL1Q08397 574 aaPredicted RBP11.89□□□□□ -0.51
C9orf3-218ENST00000482056 VAMP3Q15836 100 aa11.89□□□□□ -0.51
C9orf3-218ENST00000482056 LINC01559Q495D7 138 aa11.89□□□□□ -0.51
C9orf3-218ENST00000482056 DEFB125Q8N687 156 aa11.89□□□□□ -0.51
C9orf3-218ENST00000482056 LRBAP50851 2863 aa11.89□□□□□ -0.51
C9orf3-218ENST00000482056 NPYP01303 97 aa11.88□□□□□ -0.51
C9orf3-218ENST00000482056 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.88□□□□□ -0.51
C9orf3-218ENST00000482056 Q6ZVH6 145 aa11.88□□□□□ -0.51
C9orf3-218ENST00000482056 METTL26Q96S19 204 aa11.88□□□□□ -0.51
C9orf3-218ENST00000482056 NPFFR1Q9GZQ6 430 aa11.88□□□□□ -0.51
C9orf3-218ENST00000482056 NDUFS7O75251 213 aa11.88□□□□□ -0.51
C9orf3-218ENST00000482056 ERCC8Q13216 396 aa11.88□□□□□ -0.51
C9orf3-218ENST00000482056 CLEC19AQ6UXS0 136 aa11.88□□□□□ -0.51
C9orf3-218ENST00000482056 IFI27L1Q96BM0 104 aa11.88□□□□□ -0.51
C9orf3-218ENST00000482056 MRPL53Q96EL3 112 aaKnown RBP11.88□□□□□ -0.51
C9orf3-218ENST00000482056 WNK2Q9Y3S1 2297 aa11.87□□□□□ -0.51
C9orf3-218ENST00000482056 SMKR1H3BMG3 65 aa11.87□□□□□ -0.51
C9orf3-218ENST00000482056 NPFFO15130 113 aa11.87□□□□□ -0.51
C9orf3-218ENST00000482056 CD5LO43866 347 aa11.87□□□□□ -0.51
C9orf3-218ENST00000482056 OR4C5Q8NGB2 326 aa11.87□□□□□ -0.51
C9orf3-218ENST00000482056 AJUBAQ96IF1 538 aa11.87□□□□□ -0.51
C9orf3-218ENST00000482056 HIF1ANQ9NWT6 349 aa11.87□□□□□ -0.51
C9orf3-218ENST00000482056 TAX1BP3O14907 124 aa11.87□□□□□ -0.51
C9orf3-218ENST00000482056 CACNG7P62955 275 aa11.87□□□□□ -0.51
C9orf3-218ENST00000482056 TMEM78Q5T7P6 136 aa11.87□□□□□ -0.51
C9orf3-218ENST00000482056 CCDC140Q96MF4 163 aa11.87□□□□□ -0.51
C9orf3-218ENST00000482056 NXT2Q9NPJ8 142 aaKnown RBP11.87□□□□□ -0.51
C9orf3-218ENST00000482056 CENPVL3A0A0U1RRI6 287 aa11.86□□□□□ -0.51
C9orf3-218ENST00000482056 PRAC2D3DTV9 90 aa11.86□□□□□ -0.51
C9orf3-218ENST00000482056 PAX8Q06710 450 aa11.86□□□□□ -0.51
C9orf3-218ENST00000482056 PSMG4Q5JS54 123 aa11.86□□□□□ -0.51
C9orf3-218ENST00000482056 RNF182Q8N6D2 247 aa11.86□□□□□ -0.51
C9orf3-218ENST00000482056 ATP6V0BQ99437 205 aa11.86□□□□□ -0.51
C9orf3-218ENST00000482056 A0A1W2PPR1 153 aa11.85□□□□□ -0.51
C9orf3-218ENST00000482056 SEC11AP67812 179 aa11.85□□□□□ -0.51
C9orf3-218ENST00000482056 ATP5G2Q06055 141 aa11.85□□□□□ -0.51
C9orf3-218ENST00000482056 IL17RELQ6ZVW7 336 aa11.85□□□□□ -0.51
C9orf3-218ENST00000482056 SMIM15Q7Z3B0 74 aa11.85□□□□□ -0.51
C9orf3-218ENST00000482056 RNF185Q96GF1 192 aa11.85□□□□□ -0.51
C9orf3-218ENST00000482056 DCHS2Q6V1P9 2916 aa11.85□□□□□ -0.51
C9orf3-218ENST00000482056 CLPSL1A2RUU4 121 aa11.85□□□□□ -0.51
C9orf3-218ENST00000482056 G3V318 75 aa11.85□□□□□ -0.51
C9orf3-218ENST00000482056 LMO4P61968 165 aa11.85□□□□□ -0.51
C9orf3-218ENST00000482056 PRSS57Q6UWY2 283 aa11.85□□□□□ -0.51
C9orf3-218ENST00000482056 IGHV3-66A0A0C4DH42 116 aa11.84□□□□□ -0.51
C9orf3-218ENST00000482056 LINC01546A6NGU7 62 aa11.84□□□□□ -0.51
C9orf3-218ENST00000482056 C2orf91Q6ZV80 131 aa11.84□□□□□ -0.51
C9orf3-218ENST00000482056 C5orf56Q8N8D9 126 aa11.84□□□□□ -0.51
C9orf3-218ENST00000482056 BPESC1Q9GZL8 116 aa11.84□□□□□ -0.51
C9orf3-218ENST00000482056 MSRB1Q9NZV6 116 aa11.84□□□□□ -0.51
C9orf3-218ENST00000482056 HRNRQ86YZ3 2850 aaPredicted RBP11.84□□□□□ -0.51
C9orf3-218ENST00000482056 TNFRSF6BO95407 300 aa11.83□□□□□ -0.52
C9orf3-218ENST00000482056 ANKRD39Q53RE8 183 aa11.83□□□□□ -0.52
C9orf3-218ENST00000482056 TMEM97Q5BJF2 176 aa11.83□□□□□ -0.52
C9orf3-218ENST00000482056 OR9G4Q8NGQ1 327 aa11.83□□□□□ -0.52
C9orf3-218ENST00000482056 DCHS1Q96JQ0 3298 aa11.83□□□□□ -0.52
C9orf3-218ENST00000482056 CBY3A6NI87 242 aa11.83□□□□□ -0.52
C9orf3-218ENST00000482056 FAM223BA6NKX1 122 aa11.83□□□□□ -0.52
C9orf3-218ENST00000482056 SFTPCP11686 197 aa11.83□□□□□ -0.52
C9orf3-218ENST00000482056 FCER1GP30273 86 aa11.83□□□□□ -0.52
C9orf3-218ENST00000482056 FXYD7P58549 80 aa11.83□□□□□ -0.52
C9orf3-218ENST00000482056 C8orf86Q6ZUL3 223 aa11.83□□□□□ -0.52
C9orf3-218ENST00000482056 ZNF575Q86XF7 245 aa11.83□□□□□ -0.52
C9orf3-218ENST00000482056 FAM223AQ8IWN6 122 aa11.83□□□□□ -0.52
C9orf3-218ENST00000482056 AGPAT4-IT1Q9H0P7 198 aa11.83□□□□□ -0.52
C9orf3-218ENST00000482056 MOB4Q9Y3A3 225 aa11.83□□□□□ -0.52
C9orf3-218ENST00000482056 K7EP13 123 aa11.82□□□□□ -0.52
C9orf3-218ENST00000482056 SMAD7O15105 426 aaKnown RBP11.82□□□□□ -0.52
C9orf3-218ENST00000482056 SIVA1O15304 175 aa11.82□□□□□ -0.52
C9orf3-218ENST00000482056 FGF6P10767 208 aa11.82□□□□□ -0.52
C9orf3-218ENST00000482056 BOD1L2Q8IYS8 172 aa11.82□□□□□ -0.52
C9orf3-218ENST00000482056 PIP4P2Q8N4L2 257 aa11.82□□□□□ -0.52
C9orf3-218ENST00000482056 PEF1Q9UBV8 284 aaKnown RBP11.82□□□□□ -0.52
C9orf3-218ENST00000482056 NBASA2RRP1 2371 aa11.81□□□□□ -0.52
C9orf3-218ENST00000482056 LEPP41159 167 aa11.81□□□□□ -0.52
C9orf3-218ENST00000482056 C9orf47Q6ZRZ4 202 aa11.81□□□□□ -0.52
C9orf3-218ENST00000482056 PSMG3-AS1Q96PY0 264 aa11.81□□□□□ -0.52
C9orf3-218ENST00000482056 COL25A1Q9BXS0 654 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-218ENST00000482056 U3KQE9 123 aa11.81□□□□□ -0.52
C9orf3-218ENST00000482056 IGHV3OR16-13A0A075B7E8 117 aa11.81□□□□□ -0.52
C9orf3-218ENST00000482056 IGHV3-74A0A0B4J1X5 117 aa11.81□□□□□ -0.52
C9orf3-218ENST00000482056 TRAV8-2A0A0B4J237 113 aa11.81□□□□□ -0.52
C9orf3-218ENST00000482056 TRAV41A0A0B4J266 112 aa11.81□□□□□ -0.52
C9orf3-218ENST00000482056 A1L4Q6 167 aa11.81□□□□□ -0.52
C9orf3-218ENST00000482056 A6NDN8 102 aa11.81□□□□□ -0.52
C9orf3-218ENST00000482056 LINC01548A6NM66 108 aa11.81□□□□□ -0.52
C9orf3-218ENST00000482056 SNAI2O43623 268 aa11.81□□□□□ -0.52
C9orf3-218ENST00000482056 OR4X2Q8NGF9 303 aa11.81□□□□□ -0.52
C9orf3-218ENST00000482056 C16orf92Q96LL3 132 aa11.81□□□□□ -0.52
C9orf3-218ENST00000482056 IGF2RP11717 2491 aa11.8□□□□□ -0.52
C9orf3-218ENST00000482056 IGKV3D-20A0A0C4DH25 116 aa11.8□□□□□ -0.52
C9orf3-218ENST00000482056 ZNF207O43670 478 aaKnown RBP11.8□□□□□ -0.52
C9orf3-218ENST00000482056 PPIFP30405 207 aaKnown RBP11.8□□□□□ -0.52
C9orf3-218ENST00000482056 Q8N8P6 123 aa11.8□□□□□ -0.52
C9orf3-218ENST00000482056 HSD52Q0P140 79 aa11.79□□□□□ -0.52
C9orf3-218ENST00000482056 C9orf139Q6ZV77 190 aa11.79□□□□□ -0.52
C9orf3-218ENST00000482056 IGHV3-49A0A0A0MS15 119 aa11.79□□□□□ -0.52
C9orf3-218ENST00000482056 C7orf71A4D174 169 aa11.79□□□□□ -0.52
C9orf3-218ENST00000482056 CRIP2P52943 208 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms