RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 Q6ZTI0 123 aa12.91□□□□□ -0.34
CLK1-211ENST00000481641 ENKURQ8TC29 256 aa12.91□□□□□ -0.34
CLK1-211ENST00000481641 FAM167A-AS1Q96KT0 104 aa12.91□□□□□ -0.34
CLK1-211ENST00000481641 PYGO2Q9BRQ0 406 aa12.91□□□□□ -0.34
CLK1-211ENST00000481641 PCLOQ9Y6V0 5065 aa12.91□□□□□ -0.34
CLK1-211ENST00000481641 IGKV2-40A0A087WW87 121 aaPredicted RBP12.9□□□□□ -0.34
CLK1-211ENST00000481641 C7orf71A4D174 169 aa12.9□□□□□ -0.34
CLK1-211ENST00000481641 MPDU1O75352 247 aa12.9□□□□□ -0.34
CLK1-211ENST00000481641 IGKV2D-40P01614 121 aaPredicted RBP12.9□□□□□ -0.34
CLK1-211ENST00000481641 SLC25A5P05141 298 aaKnown RBP12.9□□□□□ -0.34
CLK1-211ENST00000481641 M6PRP20645 277 aa12.9□□□□□ -0.34
CLK1-211ENST00000481641 RNASE4P34096 147 aaKnown RBP12.9□□□□□ -0.34
CLK1-211ENST00000481641 ICAM4Q14773 271 aa12.9□□□□□ -0.34
CLK1-211ENST00000481641 LINC00299Q6ZSB3 139 aa12.9□□□□□ -0.34
CLK1-211ENST00000481641 RXFP4Q8TDU9 374 aa12.9□□□□□ -0.34
CLK1-211ENST00000481641 FAM19A4Q96LR4 140 aa12.9□□□□□ -0.34
CLK1-211ENST00000481641 TMPRSS5Q9H3S3 457 aa12.9□□□□□ -0.34
CLK1-211ENST00000481641 GSN-AS1Q9NRJ2 163 aa12.9□□□□□ -0.34
CLK1-211ENST00000481641 E5RGE8 158 aa12.89□□□□□ -0.35
CLK1-211ENST00000481641 ZNF324O75467 553 aaPredicted RBP12.89□□□□□ -0.35
CLK1-211ENST00000481641 UPK1BO75841 260 aa12.89□□□□□ -0.35
CLK1-211ENST00000481641 PDE6HQ13956 83 aa12.89□□□□□ -0.35
CLK1-211ENST00000481641 FAM122CQ6P4D5 195 aa12.89□□□□□ -0.35
CLK1-211ENST00000481641 Q6ZQT7 251 aa12.89□□□□□ -0.35
CLK1-211ENST00000481641 C6orf223Q8N319 242 aa12.89□□□□□ -0.35
CLK1-211ENST00000481641 LINC00477Q96M19 166 aa12.89□□□□□ -0.35
CLK1-211ENST00000481641 SLC25A31Q9H0C2 315 aa12.89□□□□□ -0.35
CLK1-211ENST00000481641 PRELID1Q9Y255 219 aa12.89□□□□□ -0.35
CLK1-211ENST00000481641 KLLNB2CW77 178 aa12.88□□□□□ -0.35
CLK1-211ENST00000481641 DAZ2Q13117 558 aaKnown RBP12.88□□□□□ -0.35
CLK1-211ENST00000481641 PRR9Q5T870 116 aa12.88□□□□□ -0.35
CLK1-211ENST00000481641 C11orf72Q8NBR9 251 aa12.88□□□□□ -0.35
CLK1-211ENST00000481641 VGLL1Q99990 258 aa12.88□□□□□ -0.35
CLK1-211ENST00000481641 NMES1Q9C002 83 aa12.88□□□□□ -0.35
CLK1-211ENST00000481641 OR10J4P0C629 311 aa12.87□□□□□ -0.35
CLK1-211ENST00000481641 NBEAP1P0C6P0 100 aa12.87□□□□□ -0.35
CLK1-211ENST00000481641 ESRGQ1W209 222 aa12.87□□□□□ -0.35
CLK1-211ENST00000481641 OR51M1Q9H341 326 aa12.87□□□□□ -0.35
CLK1-211ENST00000481641 AAMDCQ9H7C9 122 aa12.87□□□□□ -0.35
CLK1-211ENST00000481641 Q9H8V8 135 aa12.87□□□□□ -0.35
CLK1-211ENST00000481641 KLF12Q9Y4X4 402 aa12.87□□□□□ -0.35
CLK1-211ENST00000481641 RYR1P21817 5038 aa12.86□□□□□ -0.35
CLK1-211ENST00000481641 INMT-MINDY4F8WBC2 141 aa12.86□□□□□ -0.35
CLK1-211ENST00000481641 GPX1P07203 203 aa12.86□□□□□ -0.35
CLK1-211ENST00000481641 C9orf47Q6ZRZ4 202 aa12.86□□□□□ -0.35
CLK1-211ENST00000481641 EIF4E3Q8N5X7 224 aaKnown RBP12.86□□□□□ -0.35
CLK1-211ENST00000481641 PAXXQ9BUH6 204 aa12.86□□□□□ -0.35
CLK1-211ENST00000481641 KRTAP1-5Q9BYS1 174 aa12.86□□□□□ -0.35
CLK1-211ENST00000481641 WDR61Q9GZS3 305 aaKnown RBP12.86□□□□□ -0.35
CLK1-211ENST00000481641 TP53TG3Q9ULZ0 132 aa12.86□□□□□ -0.35
CLK1-211ENST00000481641 TRGV2A0A075B6R0 118 aa12.85□□□□□ -0.35
CLK1-211ENST00000481641 TRGV1A0A0A0MS02 117 aa12.85□□□□□ -0.35
CLK1-211ENST00000481641 CRISP2P16562 243 aa12.85□□□□□ -0.35
CLK1-211ENST00000481641 H2BFSP57053 126 aa12.85□□□□□ -0.35
CLK1-211ENST00000481641 ZFAND2AQ8N6M9 145 aa12.85□□□□□ -0.35
CLK1-211ENST00000481641 FXYD5Q96DB9 178 aa12.85□□□□□ -0.35
CLK1-211ENST00000481641 PHYHIPLQ96FC7 376 aa12.85□□□□□ -0.35
CLK1-211ENST00000481641 ANXA2RQ3ZCQ2 193 aa12.84□□□□□ -0.35
CLK1-211ENST00000481641 TMEM78Q5T7P6 136 aa12.84□□□□□ -0.35
CLK1-211ENST00000481641 ZNF680Q8NEM1 530 aa12.84□□□□□ -0.35
CLK1-211ENST00000481641 PPP1R1CQ8WVI7 109 aa12.84□□□□□ -0.35
CLK1-211ENST00000481641 ZNF503Q96F45 646 aa12.84□□□□□ -0.35
CLK1-211ENST00000481641 VSIG2Q96IQ7 327 aa12.84□□□□□ -0.35
CLK1-211ENST00000481641 LINC00467Q9BRT7 94 aa12.84□□□□□ -0.35
CLK1-211ENST00000481641 FUT9Q9Y231 359 aa12.84□□□□□ -0.35
CLK1-211ENST00000481641 LRP1BQ9NZR2 4599 aa12.83□□□□□ -0.36
CLK1-211ENST00000481641 PRAF2O60831 178 aa12.83□□□□□ -0.36
CLK1-211ENST00000481641 EIF3GO75821 320 aaKnown RBP eCLIP12.83□□□□□ -0.36
CLK1-211ENST00000481641 Q8TAT8 98 aa12.83□□□□□ -0.36
CLK1-211ENST00000481641 MRPL32Q9BYC8 188 aaKnown RBP12.83□□□□□ -0.36
CLK1-211ENST00000481641 ZNF492Q9P255 531 aa12.83□□□□□ -0.36
CLK1-211ENST00000481641 A6NHS1 94 aa12.82□□□□□ -0.36
CLK1-211ENST00000481641 RGS13O14921 159 aa12.82□□□□□ -0.36
CLK1-211ENST00000481641 SPINK4O60575 86 aa12.82□□□□□ -0.36
CLK1-211ENST00000481641 TCL1AP56279 114 aa12.82□□□□□ -0.36
CLK1-211ENST00000481641 CYCSP99999 105 aaKnown RBP12.82□□□□□ -0.36
CLK1-211ENST00000481641 SMIM3Q9BZL3 60 aa12.82□□□□□ -0.36
CLK1-211ENST00000481641 HSPG2P98160 4391 aa12.82□□□□□ -0.36
CLK1-211ENST00000481641 IGHV1OR15-1A0A075B7D0 117 aa12.81□□□□□ -0.36
CLK1-211ENST00000481641 A0A096LPF7 62 aa12.81□□□□□ -0.36
CLK1-211ENST00000481641 C16orf90A8MZG2 172 aa12.81□□□□□ -0.36
CLK1-211ENST00000481641 C17orf112F2Z3M2 114 aa12.81□□□□□ -0.36
CLK1-211ENST00000481641 H3BNG1 76 aa12.81□□□□□ -0.36
CLK1-211ENST00000481641 OR7C2O60412 319 aa12.81□□□□□ -0.36
CLK1-211ENST00000481641 IGHV3-53P01767 116 aa12.81□□□□□ -0.36
CLK1-211ENST00000481641 RANP62826 216 aaKnown RBP12.81□□□□□ -0.36
CLK1-211ENST00000481641 FFAR4Q5NUL3 377 aa12.81□□□□□ -0.36
CLK1-211ENST00000481641 ATP5SQ99766 215 aa12.81□□□□□ -0.36
CLK1-211ENST00000481641 MARVELD1Q9BSK0 173 aa12.81□□□□□ -0.36
CLK1-211ENST00000481641 KCNIP2Q9NS61 270 aa12.81□□□□□ -0.36
CLK1-211ENST00000481641 MRPL16Q9NX20 251 aaKnown RBP12.81□□□□□ -0.36
CLK1-211ENST00000481641 MRPS16Q9Y3D3 137 aaKnown RBP12.81□□□□□ -0.36
CLK1-211ENST00000481641 HSPB11Q9Y547 144 aa12.81□□□□□ -0.36
CLK1-211ENST00000481641 SSNA1O43805 119 aa12.8□□□□□ -0.36
CLK1-211ENST00000481641 MPC2O95563 127 aa12.8□□□□□ -0.36
CLK1-211ENST00000481641 NMBP08949 121 aa12.8□□□□□ -0.36
CLK1-211ENST00000481641 ZNF138P52744 262 aa12.8□□□□□ -0.36
CLK1-211ENST00000481641 C18orf15Q96N68 181 aa12.8□□□□□ -0.36
CLK1-211ENST00000481641 UPK3BQ9BT76 320 aa12.8□□□□□ -0.36
CLK1-211ENST00000481641 KRTAP4-5Q9BYR2 181 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms