RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 RPL29P47914 159 aaKnown RBP2.91□□□□□ -1.94
VPS13D-208ENST00000481484 SULT1A1P50225 295 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 CAV2P51636 162 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 DEFB1P60022 68 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 RRAS2P62070 204 aaPredicted RBP2.91□□□□□ -1.94
VPS13D-208ENST00000481484 DAZ2Q13117 558 aaKnown RBP2.91□□□□□ -1.94
VPS13D-208ENST00000481484 OPCMLQ14982 345 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 ATP6V1FQ16864 119 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 IBA57Q5T440 356 aaKnown RBP2.91□□□□□ -1.94
VPS13D-208ENST00000481484 GFI1BQ5VTD9 330 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 MZT2BQ6NZ67 158 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 C6orf223Q8N319 242 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 RXFP4Q8TDU9 374 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 ZNF431Q8TF32 576 aaPredicted RBP2.91□□□□□ -1.94
VPS13D-208ENST00000481484 S100ZQ8WXG8 99 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 GNPNAT1Q96EK6 184 aaPredicted RBP2.91□□□□□ -1.94
VPS13D-208ENST00000481484 C17orf77Q96MU5 243 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 MGST2Q99735 147 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 MRPL32Q9BYC8 188 aaKnown RBP2.91□□□□□ -1.94
VPS13D-208ENST00000481484 Q9H3A6 140 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 AAMDCQ9H7C9 122 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 NUDT15Q9NV35 164 aa2.91□□□□□ -1.94
VPS13D-208ENST00000481484 APOBP04114 4563 aaKnown RBP2.91□□□□□ -1.94
VPS13D-208ENST00000481484 IGLV2-18A0A075B6J9 118 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 TRAV12-2A0A075B6T6 113 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 C7orf71A4D174 169 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 C5orf51A6NDU8 294 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 ZNF705GA8MUZ8 300 aaPredicted RBP2.9□□□□□ -1.95
VPS13D-208ENST00000481484 C16orf90A8MZG2 172 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 KLLNB2CW77 178 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 SLC17A3O00476 420 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 PRAF2O60831 178 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 NUDT3O95989 172 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 TCRBP04435 133 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 DEFB130BP0DP73 79 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 DEFB130AP0DP74 79 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 CRISP2P16562 243 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 FGF7P21781 194 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 BCAP31P51572 246 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 TCL1AP56279 114 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 S100A10P60903 97 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 ZNF415Q09FC8 603 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 SLAQ13239 276 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 BAK1Q16611 211 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 KRTAP15-1Q3LI76 137 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 ANXA2RQ3ZCQ2 193 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 TMEM78Q5T7P6 136 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 PATE2Q6UY27 113 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 TMEM182Q6ZP80 229 aaPredicted RBP2.9□□□□□ -1.95
VPS13D-208ENST00000481484 NRARPQ7Z6K4 114 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 ZNRF2Q8NHG8 242 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 ENKURQ8TC29 256 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 C2orf50Q96LR7 162 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 ARPC5LQ9BPX5 153 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 NPCDR1Q9BY65 106 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 SLC25A31Q9H0C2 315 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 GPN1Q9HCN4 374 aaPredicted RBP2.9□□□□□ -1.95
VPS13D-208ENST00000481484 DNAJC4Q9NNZ3 241 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 SLC39A9Q9NUM3 307 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 GSKIPQ9P0R6 139 aa2.9□□□□□ -1.95
VPS13D-208ENST00000481484 MRPS16Q9Y3D3 137 aaKnown RBP2.9□□□□□ -1.95
VPS13D-208ENST00000481484 LSM5Q9Y4Y9 91 aaKnown RBP2.9□□□□□ -1.95
VPS13D-208ENST00000481484 DNAH5Q8TE73 4624 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 TRBV19A0A075B6N1 114 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 TRGV2A0A075B6R0 118 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 TRAV26-1A0A087WT03 109 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 FAM240BA0A1B0GVZ2 78 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 RBAKDNA6NC62 111 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 FAM25EA8MYX2 175 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 E5RGE8 158 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 C17orf112F2Z3M2 114 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 M0R2N4 97 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 CCSO14618 274 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 CCNKO75909 580 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 CST7O76096 145 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 PTTG1IPP53801 180 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 TAS2R45P59539 299 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 CYCSP99999 105 aaKnown RBP2.89□□□□□ -1.95
VPS13D-208ENST00000481484 ASAH1Q13510 395 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 KHDC3LQ587J8 217 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 SSX7Q7RTT5 188 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 LYPD1Q8N2G4 141 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 EIF4E3Q8N5X7 224 aaKnown RBP2.89□□□□□ -1.95
VPS13D-208ENST00000481484 TMEM252Q8N6L7 170 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 TMED6Q8WW62 240 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 TMEM37Q8WXS4 190 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 SAT2Q96F10 170 aaPredicted RBP2.89□□□□□ -1.95
VPS13D-208ENST00000481484 ST6GAL2Q96JF0 529 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 LINC00477Q96M19 166 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 SDHCQ99643 169 aaPredicted RBP2.89□□□□□ -1.95
VPS13D-208ENST00000481484 VGLL1Q99990 258 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 NMES1Q9C002 83 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 C11orf1Q9H5F2 150 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 NOP10Q9NPE3 64 aaKnown RBP2.89□□□□□ -1.95
VPS13D-208ENST00000481484 PTTG2Q9NZH5 202 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 FLVCR2Q9UPI3 526 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 TIMM9Q9Y5J7 89 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 LENEPQ9Y5L5 61 aa2.89□□□□□ -1.95
VPS13D-208ENST00000481484 ICOSQ9Y6W8 199 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms