RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 C6orf223Q8N319 242 aa8.47□□□□□ -1.05
SQSTM1-207ENST00000481335 OR5C1Q8NGR4 320 aa8.47□□□□□ -1.05
SQSTM1-207ENST00000481335 GNPNAT1Q96EK6 184 aaPredicted RBP8.47□□□□□ -1.05
SQSTM1-207ENST00000481335 UPK3BQ9BT76 320 aa8.47□□□□□ -1.05
SQSTM1-207ENST00000481335 PARD6GQ9BYG4 376 aaPredicted RBP8.47□□□□□ -1.05
SQSTM1-207ENST00000481335 LINC00588Q9Y4M8 146 aa8.47□□□□□ -1.05
SQSTM1-207ENST00000481335 DYNC1H1Q14204 4646 aaKnown RBP8.47□□□□□ -1.05
SQSTM1-207ENST00000481335 TRAV26-1A0A087WT03 109 aa8.46□□□□□ -1.06
SQSTM1-207ENST00000481335 C17orf112F2Z3M2 114 aa8.46□□□□□ -1.06
SQSTM1-207ENST00000481335 M0R3E3 92 aa8.46□□□□□ -1.06
SQSTM1-207ENST00000481335 PET100P0DJ07 73 aa8.46□□□□□ -1.06
SQSTM1-207ENST00000481335 IBA57Q5T440 356 aaKnown RBP8.46□□□□□ -1.06
SQSTM1-207ENST00000481335 TMEM78Q5T7P6 136 aa8.46□□□□□ -1.06
SQSTM1-207ENST00000481335 SLC25A2Q9BXI2 301 aa8.46□□□□□ -1.06
SQSTM1-207ENST00000481335 WDR61Q9GZS3 305 aaKnown RBP8.46□□□□□ -1.06
SQSTM1-207ENST00000481335 A0A1W2PPQ1 181 aa8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 GAGE12BA1L429 117 aa8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 ZNF324O75467 553 aaPredicted RBP8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 GAGE7O76087 117 aa8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 NBEAP1P0C6P0 100 aa8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 GAGE12FP0CL80 117 aa8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 GAGE12GP0CL81 117 aa8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 GAGE12IP0CL82 117 aa8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 PYYP10082 97 aa8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 NHLH2Q02577 135 aa8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 OR5I1Q13606 314 aa8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 SSX7Q7RTT5 188 aa8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 LYPD1Q8N2G4 141 aa8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 EIF4E3Q8N5X7 224 aaKnown RBP8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 FAM167A-AS1Q96KT0 104 aa8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 OR51M1Q9H341 326 aa8.45□□□□□ -1.06
SQSTM1-207ENST00000481335 RBAKDNA6NC62 111 aa8.44□□□□□ -1.06
SQSTM1-207ENST00000481335 J3KRW8 73 aa8.44□□□□□ -1.06
SQSTM1-207ENST00000481335 PRB4P10163 310 aaPredicted RBP8.44□□□□□ -1.06
SQSTM1-207ENST00000481335 TCL1AP56279 114 aa8.44□□□□□ -1.06
SQSTM1-207ENST00000481335 C11orf72Q8NBR9 251 aa8.44□□□□□ -1.06
SQSTM1-207ENST00000481335 THAP6Q8TBB0 222 aa8.44□□□□□ -1.06
SQSTM1-207ENST00000481335 BLNKQ8WV28 456 aa8.44□□□□□ -1.06
SQSTM1-207ENST00000481335 MARVELD1Q9BSK0 173 aa8.44□□□□□ -1.06
SQSTM1-207ENST00000481335 AGPAT4-IT1Q9H0P7 198 aa8.44□□□□□ -1.06
SQSTM1-207ENST00000481335 Q9H3A6 140 aa8.44□□□□□ -1.06
SQSTM1-207ENST00000481335 PTTG2Q9NZH5 202 aa8.44□□□□□ -1.06
SQSTM1-207ENST00000481335 FUT9Q9Y231 359 aa8.44□□□□□ -1.06
SQSTM1-207ENST00000481335 INMT-MINDY4F8WBC2 141 aa8.43□□□□□ -1.06
SQSTM1-207ENST00000481335 GPX1P07203 203 aa8.43□□□□□ -1.06
SQSTM1-207ENST00000481335 HOXA5P20719 270 aa8.43□□□□□ -1.06
SQSTM1-207ENST00000481335 ICAM4Q14773 271 aa8.43□□□□□ -1.06
SQSTM1-207ENST00000481335 LRRC37A5PQ49AS3 106 aa8.43□□□□□ -1.06
SQSTM1-207ENST00000481335 GCSAMLQ5JQS6 135 aa8.43□□□□□ -1.06
SQSTM1-207ENST00000481335 Q6ZTI0 123 aa8.43□□□□□ -1.06
SQSTM1-207ENST00000481335 EXOC3-AS1Q8N2X6 119 aa8.43□□□□□ -1.06
SQSTM1-207ENST00000481335 PPP1R1CQ8WVI7 109 aa8.43□□□□□ -1.06
SQSTM1-207ENST00000481335 ATP5SQ99766 215 aa8.43□□□□□ -1.06
SQSTM1-207ENST00000481335 PAXXQ9BUH6 204 aa8.43□□□□□ -1.06
SQSTM1-207ENST00000481335 Q9H8V8 135 aa8.43□□□□□ -1.06
SQSTM1-207ENST00000481335 OR5AC2Q9NZP5 309 aa8.43□□□□□ -1.06
SQSTM1-207ENST00000481335 ZNF492Q9P255 531 aa8.43□□□□□ -1.06
SQSTM1-207ENST00000481335 MRPS16Q9Y3D3 137 aaKnown RBP8.43□□□□□ -1.06
SQSTM1-207ENST00000481335 TRGV2A0A075B6R0 118 aa8.42□□□□□ -1.06
SQSTM1-207ENST00000481335 SPINK4O60575 86 aa8.42□□□□□ -1.06
SQSTM1-207ENST00000481335 CSN1S1P47710 185 aa8.42□□□□□ -1.06
SQSTM1-207ENST00000481335 TAS2R45P59539 299 aa8.42□□□□□ -1.06
SQSTM1-207ENST00000481335 DEFA1P59665 94 aa8.42□□□□□ -1.06
SQSTM1-207ENST00000481335 DEFA3P59666 94 aa8.42□□□□□ -1.06
SQSTM1-207ENST00000481335 ERCC8Q13216 396 aa8.42□□□□□ -1.06
SQSTM1-207ENST00000481335 SLAQ13239 276 aa8.42□□□□□ -1.06
SQSTM1-207ENST00000481335 BTN1A1Q13410 526 aa8.42□□□□□ -1.06
SQSTM1-207ENST00000481335 KHDC3LQ587J8 217 aa8.42□□□□□ -1.06
SQSTM1-207ENST00000481335 MIR17HGQ75NE6 70 aa8.42□□□□□ -1.06
SQSTM1-207ENST00000481335 ZFAND2AQ8N6M9 145 aa8.42□□□□□ -1.06
SQSTM1-207ENST00000481335 FXYD5Q96DB9 178 aa8.42□□□□□ -1.06
SQSTM1-207ENST00000481335 TMPRSS5Q9H3S3 457 aa8.42□□□□□ -1.06
SQSTM1-207ENST00000481335 LENEPQ9Y5L5 61 aa8.42□□□□□ -1.06
SQSTM1-207ENST00000481335 A0A0J9YY99 117 aa8.41□□□□□ -1.06
SQSTM1-207ENST00000481335 H0YIZ8 118 aa8.41□□□□□ -1.06
SQSTM1-207ENST00000481335 RGS13O14921 159 aa8.41□□□□□ -1.06
SQSTM1-207ENST00000481335 OR7C2O60412 319 aa8.41□□□□□ -1.06
SQSTM1-207ENST00000481335 SIX6O95475 246 aa8.41□□□□□ -1.06
SQSTM1-207ENST00000481335 RNASE4P34096 147 aaKnown RBP8.41□□□□□ -1.06
SQSTM1-207ENST00000481335 ZNF138P52744 262 aa8.41□□□□□ -1.06
SQSTM1-207ENST00000481335 H2BFSP57053 126 aa8.41□□□□□ -1.06
SQSTM1-207ENST00000481335 CD300CQ08708 224 aa8.41□□□□□ -1.06
SQSTM1-207ENST00000481335 FAM122CQ6P4D5 195 aa8.41□□□□□ -1.06
SQSTM1-207ENST00000481335 TMED6Q8WW62 240 aa8.41□□□□□ -1.06
SQSTM1-207ENST00000481335 ST6GAL2Q96JF0 529 aa8.41□□□□□ -1.06
SQSTM1-207ENST00000481335 ARPC5LQ9BPX5 153 aa8.41□□□□□ -1.06
SQSTM1-207ENST00000481335 GSN-AS1Q9NRJ2 163 aa8.41□□□□□ -1.06
SQSTM1-207ENST00000481335 HSPB11Q9Y547 144 aa8.41□□□□□ -1.06
SQSTM1-207ENST00000481335 IGHV1OR15-1A0A075B7D0 117 aa8.4□□□□□ -1.06
SQSTM1-207ENST00000481335 IGKV2-40A0A087WW87 121 aaPredicted RBP8.4□□□□□ -1.06
SQSTM1-207ENST00000481335 TRGV1A0A0A0MS02 117 aa8.4□□□□□ -1.06
SQSTM1-207ENST00000481335 MPC2O95563 127 aa8.4□□□□□ -1.06
SQSTM1-207ENST00000481335 IFNA5P01569 189 aa8.4□□□□□ -1.06
SQSTM1-207ENST00000481335 IGKV2D-40P01614 121 aaPredicted RBP8.4□□□□□ -1.06
SQSTM1-207ENST00000481335 UBE2L3P68036 154 aaKnown RBP8.4□□□□□ -1.06
SQSTM1-207ENST00000481335 TNP2Q05952 138 aa8.4□□□□□ -1.06
SQSTM1-207ENST00000481335 ZNF415Q09FC8 603 aa8.4□□□□□ -1.06
SQSTM1-207ENST00000481335 ARL6IP6Q8N6S5 226 aa8.4□□□□□ -1.06
SQSTM1-207ENST00000481335 PHYHIPLQ96FC7 376 aa8.4□□□□□ -1.06
SQSTM1-207ENST00000481335 VGLL1Q99990 258 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms