RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 CSNK1G2-AS1Q8NCQ2 148 aa9.04□□□□□ -0.96
SHROOM3-205ENST00000481002 ODF3Q96PU9 254 aa9.04□□□□□ -0.96
SHROOM3-205ENST00000481002 MANBALQ9NQG1 85 aa9.04□□□□□ -0.96
SHROOM3-205ENST00000481002 TP53TG1Q9Y2A0 90 aa9.04□□□□□ -0.96
SHROOM3-205ENST00000481002 TCRAP04437 139 aa9.03□□□□□ -0.96
SHROOM3-205ENST00000481002 FXYD7P58549 80 aa9.03□□□□□ -0.96
SHROOM3-205ENST00000481002 GNG5P63218 68 aa9.03□□□□□ -0.96
SHROOM3-205ENST00000481002 TMEM78Q5T7P6 136 aa9.03□□□□□ -0.96
SHROOM3-205ENST00000481002 CST9LP1Q5W188 147 aa9.03□□□□□ -0.96
SHROOM3-205ENST00000481002 GOLT1AQ6ZVE7 132 aa9.03□□□□□ -0.96
SHROOM3-205ENST00000481002 RNF183Q96D59 192 aa9.03□□□□□ -0.96
SHROOM3-205ENST00000481002 FAM19A4Q96LR4 140 aa9.03□□□□□ -0.96
SHROOM3-205ENST00000481002 SPATA25Q9BR10 227 aa9.03□□□□□ -0.96
SHROOM3-205ENST00000481002 OVOL2Q9BRP0 275 aa9.03□□□□□ -0.96
SHROOM3-205ENST00000481002 TCEAL7Q9BRU2 100 aa9.03□□□□□ -0.96
SHROOM3-205ENST00000481002 ZNF492Q9P255 531 aa9.03□□□□□ -0.96
SHROOM3-205ENST00000481002 XCL2Q9UBD3 114 aa9.03□□□□□ -0.96
SHROOM3-205ENST00000481002 TRBV7-9A0A0J9YWB2 115 aa9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 M0R2Z0 102 aa9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 CRXO43186 299 aaPredicted RBP9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 SPRY2O43597 315 aa9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 TSPOP30536 169 aa9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 ATP5G3P48201 142 aa9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 ZNF138P52744 262 aa9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 SPINK13Q1W4C9 94 aa9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 DEFB135Q30KP9 77 aa9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 HIST1H2BAQ96A08 127 aa9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 RCHY1Q96PM5 261 aa9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 ATG101Q9BSB4 218 aa9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 ZMAT4Q9H898 229 aa9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 GNG13Q9P2W3 67 aa9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 RPH3ALQ9UNE2 315 aa9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 LENEPQ9Y5L5 61 aa9.02□□□□□ -0.97
SHROOM3-205ENST00000481002 F6UZH7 168 aa9.01□□□□□ -0.97
SHROOM3-205ENST00000481002 K7EQM0 130 aa9.01□□□□□ -0.97
SHROOM3-205ENST00000481002 NMBP08949 121 aa9.01□□□□□ -0.97
SHROOM3-205ENST00000481002 CRISP2P16562 243 aa9.01□□□□□ -0.97
SHROOM3-205ENST00000481002 LEPP41159 167 aa9.01□□□□□ -0.97
SHROOM3-205ENST00000481002 CDKN1BP46527 198 aa9.01□□□□□ -0.97
SHROOM3-205ENST00000481002 CYB561D1Q8N8Q1 229 aa9.01□□□□□ -0.97
SHROOM3-205ENST00000481002 IGF2BP2-AS1Q96M15 143 aa9.01□□□□□ -0.97
SHROOM3-205ENST00000481002 TXNDC17Q9BRA2 123 aa9.01□□□□□ -0.97
SHROOM3-205ENST00000481002 TRAV8-1A0A0A6YYK1 113 aa9□□□□□ -0.97
SHROOM3-205ENST00000481002 FBLL1A6NHQ2 334 aaKnown RBP9□□□□□ -0.97
SHROOM3-205ENST00000481002 C11orf94C9JXX5 98 aa9□□□□□ -0.97
SHROOM3-205ENST00000481002 PEX7O00628 323 aa9□□□□□ -0.97
SHROOM3-205ENST00000481002 IFNA1P01562 189 aa9□□□□□ -0.97
SHROOM3-205ENST00000481002 IGLV2-11P01706 119 aa9□□□□□ -0.97
SHROOM3-205ENST00000481002 TAGLN2P37802 199 aaKnown RBP9□□□□□ -0.97
SHROOM3-205ENST00000481002 ZFAND2AQ8N6M9 145 aa9□□□□□ -0.97
SHROOM3-205ENST00000481002 TMEM75Q8N9X5 138 aa9□□□□□ -0.97
SHROOM3-205ENST00000481002 RETNQ9HD89 108 aa9□□□□□ -0.97
SHROOM3-205ENST00000481002 KLF12Q9Y4X4 402 aa9□□□□□ -0.97
SHROOM3-205ENST00000481002 STAB2Q8WWQ8 2551 aa8.99□□□□□ -0.97
SHROOM3-205ENST00000481002 TRAV12-2A0A075B6T6 113 aa8.99□□□□□ -0.97
SHROOM3-205ENST00000481002 KLLNB2CW77 178 aa8.99□□□□□ -0.97
SHROOM3-205ENST00000481002 BCL2P10415 239 aa8.99□□□□□ -0.97
SHROOM3-205ENST00000481002 IFITM2Q01629 132 aa8.99□□□□□ -0.97
SHROOM3-205ENST00000481002 KIR3DS1Q14943 382 aa8.99□□□□□ -0.97
SHROOM3-205ENST00000481002 ZNF705AQ6ZN79 300 aaPredicted RBP8.99□□□□□ -0.97
SHROOM3-205ENST00000481002 C1orf158Q8N1D5 194 aa8.99□□□□□ -0.97
SHROOM3-205ENST00000481002 Q8TAT8 98 aa8.99□□□□□ -0.97
SHROOM3-205ENST00000481002 VAX2Q9UIW0 290 aa8.99□□□□□ -0.97
SHROOM3-205ENST00000481002 PSG8Q9UQ74 426 aa8.99□□□□□ -0.97
SHROOM3-205ENST00000481002 INSP01308 110 aa8.98□□□□□ -0.97
SHROOM3-205ENST00000481002 FLI1Q01543 452 aaPredicted RBP8.98□□□□□ -0.97
SHROOM3-205ENST00000481002 MEF2BQ02080 365 aaPredicted RBP8.98□□□□□ -0.97
SHROOM3-205ENST00000481002 GFI1BQ5VTD9 330 aa8.98□□□□□ -0.97
SHROOM3-205ENST00000481002 OR11H2Q8NH07 326 aa8.98□□□□□ -0.97
SHROOM3-205ENST00000481002 C2CD4CQ8TF44 421 aa8.98□□□□□ -0.97
SHROOM3-205ENST00000481002 TVP23CQ96ET8 276 aa8.98□□□□□ -0.97
SHROOM3-205ENST00000481002 SGK494Q96LW2 274 aa8.98□□□□□ -0.97
SHROOM3-205ENST00000481002 LINC00479Q96M42 142 aa8.98□□□□□ -0.97
SHROOM3-205ENST00000481002 RARRES2Q99969 163 aa8.98□□□□□ -0.97
SHROOM3-205ENST00000481002 C20orf144Q9BQM9 153 aa8.98□□□□□ -0.97
SHROOM3-205ENST00000481002 HUWE1Q7Z6Z7 4374 aaKnown RBP8.98□□□□□ -0.97
SHROOM3-205ENST00000481002 TRAV34A0A0B4J273 112 aa8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 TRBV6-1A0A0K0K1D8 114 aa8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 LOC102723971A0A1B0GUV8 181 aa8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 SCO2A0A1W2PP80 73 aa8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 RBFOX3A6NFN3 312 aa8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 GPX1P07203 203 aa8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 RBMY1A1P0DJD3 496 aaKnown RBP8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 RBMY1CP0DJD4 496 aa8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 RBMY1FQ15415 496 aaKnown RBP8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 ZNF767PQ75MW2 155 aa8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 PCNPQ8WW12 178 aaKnown RBP8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 C11orf52Q96A22 123 aa8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 FMC1Q96HJ9 113 aa8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 NEU1Q99519 415 aa8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 GOLT1BQ9Y3E0 138 aa8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 U3KQK5 164 aa8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 X6R8D5 127 aa8.97□□□□□ -0.97
SHROOM3-205ENST00000481002 C7orf71A4D174 169 aa8.96□□□□□ -0.98
SHROOM3-205ENST00000481002 SMIM9A6NGZ8 99 aa8.96□□□□□ -0.98
SHROOM3-205ENST00000481002 J3KRW8 73 aa8.96□□□□□ -0.98
SHROOM3-205ENST00000481002 PDE6DO43924 150 aa8.96□□□□□ -0.98
SHROOM3-205ENST00000481002 NDUFS6O75380 124 aaKnown RBP8.96□□□□□ -0.98
SHROOM3-205ENST00000481002 ZNF324O75467 553 aaPredicted RBP8.96□□□□□ -0.98
SHROOM3-205ENST00000481002 S100A9P06702 114 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms