RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 TCL1BO95988 128 aa5.29□□□□□ -1.56
LSM5-210ENST00000480956 TPPP2P59282 170 aa5.29□□□□□ -1.56
LSM5-210ENST00000480956 NOXRED1Q6NXP6 359 aa5.29□□□□□ -1.56
LSM5-210ENST00000480956 MGAMO43451 1857 aa5.29□□□□□ -1.56
LSM5-210ENST00000480956 C7orf71A4D174 169 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 FNDC10F2Z333 226 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 TRGC1P0CF51 173 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 HSD52Q0P140 79 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 Q6ZR03 302 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 LINC00301Q8NCQ3 95 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 OR4B1Q8NGF8 309 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 DPH3Q96FX2 82 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 DUSP21Q9H596 190 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 A0A0J9YW62 118 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 NCKAP5O14513 1909 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 CREBL2O60519 120 aaPredicted RBP5.28□□□□□ -1.56
LSM5-210ENST00000480956 PYYP10082 97 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 HIST1H1BP16401 226 aaKnown RBP5.28□□□□□ -1.56
LSM5-210ENST00000480956 COL5A1-AS1Q5SY13 56 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 Q6ZQT7 251 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 TMEM105Q8N8V8 129 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 PFN4Q8NHR9 129 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 ELSPBP1Q96BH3 223 aa5.28□□□□□ -1.56
LSM5-210ENST00000480956 DNAH12Q6ZR08 3092 aa5.27□□□□□ -1.57
LSM5-210ENST00000480956 A0A1W2PQD3 144 aa5.27□□□□□ -1.57
LSM5-210ENST00000480956 H3BT86 120 aa5.27□□□□□ -1.57
LSM5-210ENST00000480956 SNRPD3P62318 126 aaKnown RBP5.27□□□□□ -1.57
LSM5-210ENST00000480956 C2orf91Q6ZV80 131 aa5.27□□□□□ -1.57
LSM5-210ENST00000480956 GKN2Q86XP6 184 aa5.27□□□□□ -1.57
LSM5-210ENST00000480956 C3orf56Q8N813 242 aa5.27□□□□□ -1.57
LSM5-210ENST00000480956 MUC7Q8TAX7 377 aa5.27□□□□□ -1.57
LSM5-210ENST00000480956 DIRC1Q969H9 104 aa5.27□□□□□ -1.57
LSM5-210ENST00000480956 IMMP2LQ96T52 175 aa5.27□□□□□ -1.57
LSM5-210ENST00000480956 SNHG12Q9BXW3 62 aa5.27□□□□□ -1.57
LSM5-210ENST00000480956 KIF26BQ2KJY2 2108 aa5.27□□□□□ -1.57
LSM5-210ENST00000480956 NUP214P35658 2090 aaPredicted RBP5.26□□□□□ -1.57
LSM5-210ENST00000480956 M0R129 80 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 LINC01565O15544 149 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 HBDP02042 147 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 XCL1P47992 114 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 TMEM258P61165 79 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 LSM3P62310 102 aaKnown RBP5.26□□□□□ -1.57
LSM5-210ENST00000480956 KHDC3LQ587J8 217 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 SPANXDQ9BXN6 97 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 IER3IP1Q9Y5U9 82 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 IGKV1D-37A0A075B6S9 117 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 MSMBP08118 114 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 DYNLT1P63172 113 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 Q5W150 140 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 ZNF660Q6AZW8 331 aaPredicted RBP5.26□□□□□ -1.57
LSM5-210ENST00000480956 DPPA3Q6W0C5 159 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 AAED1Q7RTV5 226 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 ATOH7Q8N100 152 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 KCNRGQ8N5I3 272 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 TNFRSF19Q9NS68 423 aa5.26□□□□□ -1.57
LSM5-210ENST00000480956 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.25□□□□□ -1.57
LSM5-210ENST00000480956 IGHV3-15A0A0B4J1V0 119 aa5.25□□□□□ -1.57
LSM5-210ENST00000480956 RPL28P46779 137 aaKnown RBP5.25□□□□□ -1.57
LSM5-210ENST00000480956 SUPT4H1P63272 117 aaKnown RBP5.25□□□□□ -1.57
LSM5-210ENST00000480956 GTSCR1Q86UQ5 136 aa5.25□□□□□ -1.57
LSM5-210ENST00000480956 RPRMLQ8N4K4 120 aa5.25□□□□□ -1.57
LSM5-210ENST00000480956 A0A087WYN8 130 aa5.24□□□□□ -1.57
LSM5-210ENST00000480956 H3BQ85 93 aa5.24□□□□□ -1.57
LSM5-210ENST00000480956 ZNF883P0CG24 379 aa5.24□□□□□ -1.57
LSM5-210ENST00000480956 CD24P25063 80 aa5.24□□□□□ -1.57
LSM5-210ENST00000480956 FOXA1P55317 472 aa5.24□□□□□ -1.57
LSM5-210ENST00000480956 S100A10P60903 97 aa5.24□□□□□ -1.57
LSM5-210ENST00000480956 FAM229BQ4G0N7 80 aa5.24□□□□□ -1.57
LSM5-210ENST00000480956 VOPP1Q96AW1 172 aa5.24□□□□□ -1.57
LSM5-210ENST00000480956 DNAJC15Q9Y5T4 150 aa5.24□□□□□ -1.57
LSM5-210ENST00000480956 PLXNB1O43157 2135 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 TNFP01375 233 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 IGLV7-43P04211 117 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 ZNF19P17023 458 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 NFYAP23511 347 aaPredicted RBP5.23□□□□□ -1.57
LSM5-210ENST00000480956 KLRD1Q13241 179 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 C2orf83Q53S99 150 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.23□□□□□ -1.57
LSM5-210ENST00000480956 PATE2Q6UY27 113 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 MDFICQ9P1T7 246 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 ZNF407Q9C0G0 2248 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 MYH9P35579 1960 aaKnown RBP5.23□□□□□ -1.57
LSM5-210ENST00000480956 CASP8AP2Q9UKL3 1982 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 ATG2AQ2TAZ0 1938 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 A0A0D9SG52 128 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 H3BQF6 201 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 SYNGR2O43760 224 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 CLLU1Q5K131 121 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 TAS2R8Q9NYW2 309 aa5.23□□□□□ -1.57
LSM5-210ENST00000480956 MKI67P46013 3256 aaKnown RBP5.22□□□□□ -1.57
LSM5-210ENST00000480956 C17orf98A8MV24 154 aa5.22□□□□□ -1.57
LSM5-210ENST00000480956 PHOX2AO14813 284 aa5.22□□□□□ -1.57
LSM5-210ENST00000480956 ZNF861PO60384 105 aa5.22□□□□□ -1.57
LSM5-210ENST00000480956 TPT1P13693 172 aaKnown RBP5.22□□□□□ -1.57
LSM5-210ENST00000480956 FUT5Q11128 374 aa5.22□□□□□ -1.57
LSM5-210ENST00000480956 CATR1Q13166 79 aa5.22□□□□□ -1.57
LSM5-210ENST00000480956 CDK5R1Q15078 307 aa5.22□□□□□ -1.57
LSM5-210ENST00000480956 C14orf177Q52M58 125 aa5.22□□□□□ -1.57
LSM5-210ENST00000480956 CABIN1Q9Y6J0 2220 aa5.22□□□□□ -1.57
LSM5-210ENST00000480956 ZNF236Q9UL36 1845 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms