RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 SLC38A11Q08AI6 406 aa6.6□□□□□ -1.35
SRGAP3-206ENST00000480750 ARL16Q0P5N6 197 aa6.6□□□□□ -1.35
SRGAP3-206ENST00000480750 RBMY1FQ15415 496 aaKnown RBP6.6□□□□□ -1.35
SRGAP3-206ENST00000480750 CSNK1G2-AS1Q8NCQ2 148 aa6.6□□□□□ -1.35
SRGAP3-206ENST00000480750 PFDN5Q99471 154 aa6.6□□□□□ -1.35
SRGAP3-206ENST00000480750 TMEM208Q9BTX3 173 aa6.6□□□□□ -1.35
SRGAP3-206ENST00000480750 SLC25A39Q9BZJ4 359 aaPredicted RBP6.6□□□□□ -1.35
SRGAP3-206ENST00000480750 GOLT1BQ9Y3E0 138 aa6.6□□□□□ -1.35
SRGAP3-206ENST00000480750 X6R8D5 127 aa6.6□□□□□ -1.35
SRGAP3-206ENST00000480750 EPPK1P58107 5090 aaKnown RBP6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 TRBV24-1A0A075B6N3 115 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 A0A0J9YX75 114 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 LINC00587B1AMM8 73 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 H3BRN7 92 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 PPP1R2P9O14990 202 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 COX7A2P2O60397 106 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 ATP6V0CP27449 155 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 EMP1P54849 157 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 TCTAP57738 103 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 HBG1P69891 147 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 HBG2P69892 147 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 RAB31Q13636 194 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 FAM78BQ5VT40 261 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 TMEM252Q8N6L7 170 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 HSD17B11Q8NBQ5 300 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 ZNF738Q8NE65 137 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 MBD3L1Q8WWY6 194 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 C20orf173Q96LM9 149 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 C17orf77Q96MU5 243 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 UHRF2Q96PU4 802 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 SHANK2-AS3Q9BTD1 123 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 GGACTQ9BVM4 153 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 SMIM3Q9BZL3 60 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 WFDC1Q9HC57 220 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 PPP1R14DQ9NXH3 145 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 TIMM9Q9Y5J7 89 aa6.59□□□□□ -1.35
SRGAP3-206ENST00000480750 LOC102723971A0A1B0GUV8 181 aa6.58□□□□□ -1.36
SRGAP3-206ENST00000480750 TMEM189A5PLL7 270 aa6.58□□□□□ -1.36
SRGAP3-206ENST00000480750 SMIM9A6NGZ8 99 aa6.58□□□□□ -1.36
SRGAP3-206ENST00000480750 TSTD3H0UI37 97 aa6.58□□□□□ -1.36
SRGAP3-206ENST00000480750 CST7O76096 145 aa6.58□□□□□ -1.36
SRGAP3-206ENST00000480750 DUSP14O95147 198 aaKnown RBP6.58□□□□□ -1.36
SRGAP3-206ENST00000480750 RPS10P46783 165 aaKnown RBP6.58□□□□□ -1.36
SRGAP3-206ENST00000480750 ELOBQ15370 118 aa6.58□□□□□ -1.36
SRGAP3-206ENST00000480750 LGALS9CQ6DKI2 356 aa6.58□□□□□ -1.36
SRGAP3-206ENST00000480750 Q6ZTC4 211 aa6.58□□□□□ -1.36
SRGAP3-206ENST00000480750 RNF182Q8N6D2 247 aa6.58□□□□□ -1.36
SRGAP3-206ENST00000480750 CLUHP3Q96NS8 147 aa6.58□□□□□ -1.36
SRGAP3-206ENST00000480750 RFNGQ9Y644 331 aa6.58□□□□□ -1.36
SRGAP3-206ENST00000480750 FAM24AA6NFZ4 105 aa6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 MBP02144 154 aa6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 AMBPP02760 352 aa6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 ZNF705DP0CH99 300 aaPredicted RBP6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 ZNF705BP0CI00 300 aaPredicted RBP6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 SPART-AS1P0CW21 52 aa6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 PLP1P60201 277 aa6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 PKIAP61925 76 aa6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 RHOBP62745 196 aa6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 ATP6V1FQ16864 119 aa6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 ZNF705AQ6ZN79 300 aaPredicted RBP6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 LINC00305Q7Z4B0 112 aa6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 SCGB1C1Q8TD33 95 aa6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 NEU1Q99519 415 aa6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 CELA1Q9UNI1 258 aa6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 VPS13DQ5THJ4 4388 aa6.57□□□□□ -1.36
SRGAP3-206ENST00000480750 IGHV4-4A0A075B6R2 117 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 DEFB131BA0A096LNP1 70 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 UBE2L5PA0A1B0GUS4 154 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 TEX48A0A1B0GUV7 120 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 IGSF23A1L1A6 192 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 ZNF705FA8MVS1 300 aaPredicted RBP6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 TMEM250H0YL14 139 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 H3BTX0 84 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 INSP01308 110 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 PRM2P04554 102 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 BCL2P10415 239 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 CNN1P51911 297 aaKnown RBP6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 HIST1H1AQ02539 215 aaPredicted RBP6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 NHLH2Q02577 135 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 ICAM4Q14773 271 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 RRN3P1Q2M238 152 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 ZNF674Q2M3X9 581 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 COA6Q5JTJ3 125 aaKnown RBP6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 C10orf113Q5VZT2 155 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 LCN15Q6UWW0 184 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 PATE2Q6UY27 113 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 MRPL52Q86TS9 123 aaKnown RBP6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 BPIFA4PQ86YQ2 179 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 ZNF709Q8N972 641 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 OR5C1Q8NGR4 320 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 ISOC2Q96AB3 205 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 MGST2Q99735 147 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 SH3BGRL3Q9H299 93 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 VAX2Q9UIW0 290 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 FRAS1Q86XX4 4008 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 DNAH6Q9C0G6 4158 aa6.56□□□□□ -1.36
SRGAP3-206ENST00000480750 A0A087X0K7 114 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 TRAV8-2A0A0B4J237 113 aa6.55□□□□□ -1.36
SRGAP3-206ENST00000480750 M0R2Z0 102 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms