RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 RPS20P60866 119 aaKnown RBP8.34□□□□□ -1.07
VTI1A-204ENST00000480057 SMUG1Q53HV7 270 aa8.34□□□□□ -1.07
VTI1A-204ENST00000480057 FAM162BQ5T6X4 162 aa8.34□□□□□ -1.07
VTI1A-204ENST00000480057 TMEM78Q5T7P6 136 aa8.34□□□□□ -1.07
VTI1A-204ENST00000480057 Q6AWC8 147 aa8.34□□□□□ -1.07
VTI1A-204ENST00000480057 IGFL4Q6B9Z1 124 aa8.34□□□□□ -1.07
VTI1A-204ENST00000480057 ZFP82Q8N141 532 aa8.34□□□□□ -1.07
VTI1A-204ENST00000480057 RNF182Q8N6D2 247 aa8.34□□□□□ -1.07
VTI1A-204ENST00000480057 ZNF738Q8NE65 137 aa8.34□□□□□ -1.07
VTI1A-204ENST00000480057 SMR3AQ99954 134 aa8.34□□□□□ -1.07
VTI1A-204ENST00000480057 VGLL1Q99990 258 aa8.34□□□□□ -1.07
VTI1A-204ENST00000480057 XKRY2A2RUG3 117 aa8.33□□□□□ -1.08
VTI1A-204ENST00000480057 C5orf52A6NGY3 159 aa8.33□□□□□ -1.08
VTI1A-204ENST00000480057 PRAC2D3DTV9 90 aa8.33□□□□□ -1.08
VTI1A-204ENST00000480057 RPL11P62913 178 aaKnown RBP8.33□□□□□ -1.08
VTI1A-204ENST00000480057 KLHL30-AS1Q8NEE0 82 aa8.33□□□□□ -1.08
VTI1A-204ENST00000480057 NUP35Q8NFH5 326 aa8.33□□□□□ -1.08
VTI1A-204ENST00000480057 DCANP1Q8TF63 244 aa8.33□□□□□ -1.08
VTI1A-204ENST00000480057 FRZBQ92765 325 aa8.33□□□□□ -1.08
VTI1A-204ENST00000480057 NEU1Q99519 415 aa8.33□□□□□ -1.08
VTI1A-204ENST00000480057 ASCL2Q99929 193 aa8.33□□□□□ -1.08
VTI1A-204ENST00000480057 AGPAT4-IT1Q9H0P7 198 aa8.33□□□□□ -1.08
VTI1A-204ENST00000480057 HECTD1Q9ULT8 2610 aa8.33□□□□□ -1.08
VTI1A-204ENST00000480057 TRAPPC1Q9Y5R8 145 aa8.33□□□□□ -1.08
VTI1A-204ENST00000480057 TSSC4Q9Y5U2 329 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-204ENST00000480057 ZNF469Q96JG9 3925 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-204ENST00000480057 FABP5P3A8MUU1 101 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 HIGD1CA8MV81 97 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 TCF21O43680 179 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 HIST1H2BKO60814 126 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 HLA-DQA1P01909 254 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 HIST1H2BJP06899 126 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 TRGC1P0CF51 173 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 HIST1H2BOP23527 126 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 HIST1H2BBP33778 126 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 CRIP1P50238 77 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 HIST1H2BDP58876 126 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 HIST1H2BCP62807 126 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 HIST1H1AQ02539 215 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-204ENST00000480057 FHL3Q13643 280 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 HIST2H2BEQ16778 126 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-204ENST00000480057 RBPMS2Q6ZRY4 209 aaKnown RBP8.32□□□□□ -1.08
VTI1A-204ENST00000480057 OR11H1Q8NG94 326 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 OR2D3Q8NGH3 330 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 OR10J6PQ8NGY7 276 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 HIST1H2BHQ93079 126 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 C20orf173Q96LM9 149 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 C8orf49Q96NF6 230 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 HIST1H2BNQ99877 126 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 HIST1H2BMQ99879 126 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 CSMD1Q96PZ7 3565 aa8.32□□□□□ -1.08
VTI1A-204ENST00000480057 MYO9AB2RTY4 2548 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 TLN2Q9Y4G6 2542 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 A0A1B0GW15 77 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 A0A1B0GXF2 115 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 K7EQG2 157 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 UBE2CO00762 179 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 SH2D1AO60880 128 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 CA1P00915 261 aaPredicted RBP8.31□□□□□ -1.08
VTI1A-204ENST00000480057 SLURP1P55000 103 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 TCL1AP56279 114 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 PAFAH1B2P68402 229 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 ERCC8Q13216 396 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 KHDC1LQ5JSQ8 128 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 C18orf65Q6ZTR6 163 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 OR8A1Q8NGG7 326 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 OR9G4Q8NGQ1 327 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 Q8TAT8 98 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 MS4A6AQ9H2W1 248 aa8.31□□□□□ -1.08
VTI1A-204ENST00000480057 A0A1B0GUS0 222 aa8.3□□□□□ -1.08
VTI1A-204ENST00000480057 TMEM189A5PLL7 270 aa8.3□□□□□ -1.08
VTI1A-204ENST00000480057 S100A8P05109 93 aa8.3□□□□□ -1.08
VTI1A-204ENST00000480057 CD28P10747 220 aa8.3□□□□□ -1.08
VTI1A-204ENST00000480057 PROK1P58294 105 aa8.3□□□□□ -1.08
VTI1A-204ENST00000480057 SNRPD3P62318 126 aaKnown RBP8.3□□□□□ -1.08
VTI1A-204ENST00000480057 FABP9Q0Z7S8 132 aa8.3□□□□□ -1.08
VTI1A-204ENST00000480057 COA6Q5JTJ3 125 aaKnown RBP8.3□□□□□ -1.08
VTI1A-204ENST00000480057 TMEM136Q6ZRR5 245 aa8.3□□□□□ -1.08
VTI1A-204ENST00000480057 APRG1Q8IVJ8 170 aa8.3□□□□□ -1.08
VTI1A-204ENST00000480057 GTSF1Q8WW33 167 aa8.3□□□□□ -1.08
VTI1A-204ENST00000480057 FAM19A4Q96LR4 140 aa8.3□□□□□ -1.08
VTI1A-204ENST00000480057 ODF3Q96PU9 254 aa8.3□□□□□ -1.08
VTI1A-204ENST00000480057 GPR61Q9BZJ8 451 aa8.3□□□□□ -1.08
VTI1A-204ENST00000480057 MRPL18Q9H0U6 180 aaKnown RBP8.3□□□□□ -1.08
VTI1A-204ENST00000480057 SIGLEC8Q9NYZ4 499 aa8.3□□□□□ -1.08
VTI1A-204ENST00000480057 RNF114Q9Y508 228 aa8.3□□□□□ -1.08
VTI1A-204ENST00000480057 ZFHX3Q15911 3703 aa8.3□□□□□ -1.08
VTI1A-204ENST00000480057 SONP18583 2426 aaKnown RBP8.3□□□□□ -1.08
VTI1A-204ENST00000480057 HIVEP2P31629 2446 aa8.29□□□□□ -1.08
VTI1A-204ENST00000480057 TRAV25A0A0B4J276 109 aa8.29□□□□□ -1.08
VTI1A-204ENST00000480057 SNURFLB1AK76 121 aa8.29□□□□□ -1.08
VTI1A-204ENST00000480057 INAFM1C9JVW0 142 aa8.29□□□□□ -1.08
VTI1A-204ENST00000480057 CRLF1O75462 422 aa8.29□□□□□ -1.08
VTI1A-204ENST00000480057 CRISP2P16562 243 aa8.29□□□□□ -1.08
VTI1A-204ENST00000480057 HOXA5P20719 270 aa8.29□□□□□ -1.08
VTI1A-204ENST00000480057 EDN2P20800 178 aa8.29□□□□□ -1.08
VTI1A-204ENST00000480057 SNRPEP62304 92 aaKnown RBP8.29□□□□□ -1.08
VTI1A-204ENST00000480057 HBBP68871 147 aa8.29□□□□□ -1.08
VTI1A-204ENST00000480057 DEFB136Q30KP8 78 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms