RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 ZNF705BP0CI00 300 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC12-219ENST00000479955 LEPP41159 167 aa8.67□□□□□ -1.02
TRAPPC12-219ENST00000479955 UBE2G1P62253 170 aa8.67□□□□□ -1.02
TRAPPC12-219ENST00000479955 GNG5P63218 68 aa8.67□□□□□ -1.02
TRAPPC12-219ENST00000479955 TOR2AQ5JU69 321 aa8.67□□□□□ -1.02
TRAPPC12-219ENST00000479955 SAPCD1Q5SSQ6 148 aa8.67□□□□□ -1.02
TRAPPC12-219ENST00000479955 TMEM75Q8N9X5 138 aa8.67□□□□□ -1.02
TRAPPC12-219ENST00000479955 FMC1Q96HJ9 113 aa8.67□□□□□ -1.02
TRAPPC12-219ENST00000479955 CITED4Q96RK1 184 aa8.67□□□□□ -1.02
TRAPPC12-219ENST00000479955 RARRES2Q99969 163 aa8.67□□□□□ -1.02
TRAPPC12-219ENST00000479955 NDFIP1Q9BT67 221 aa8.67□□□□□ -1.02
TRAPPC12-219ENST00000479955 AGPAT4-IT1Q9H0P7 198 aa8.67□□□□□ -1.02
TRAPPC12-219ENST00000479955 CSTL1Q9H114 145 aa8.67□□□□□ -1.02
TRAPPC12-219ENST00000479955 ZNF492Q9P255 531 aa8.67□□□□□ -1.02
TRAPPC12-219ENST00000479955 IGKV2-40A0A087WW87 121 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 RAB19A4D1S5 217 aa8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 TMEM250H0YL14 139 aa8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 IGKV2D-40P01614 121 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 IGKV3-20P01619 116 aa8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 RPL35AP18077 110 aaKnown RBP8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 AKR1C3P42330 323 aa8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 DEFB1P60022 68 aa8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 FLI1Q01543 452 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 TMEM183BQ1AE95 376 aa8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 LINC00322Q6ZN03 302 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 C11orf52Q96A22 123 aa8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 VGLL1Q99990 258 aa8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 MED9Q9NWA0 146 aa8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 PSG8Q9UQ74 426 aa8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 KLF12Q9Y4X4 402 aa8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 MGAM2Q2M2H8 2515 aa8.66□□□□□ -1.02
TRAPPC12-219ENST00000479955 CMYA5Q8N3K9 4069 aa8.65□□□□□ -1.02
TRAPPC12-219ENST00000479955 TRBV6-1A0A0K0K1D8 114 aa8.65□□□□□ -1.02
TRAPPC12-219ENST00000479955 RBMY1BA6NDE4 496 aaKnown RBP8.65□□□□□ -1.02
TRAPPC12-219ENST00000479955 RBMY1EA6NEQ0 496 aaKnown RBP8.65□□□□□ -1.02
TRAPPC12-219ENST00000479955 PRB2P02812 416 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC12-219ENST00000479955 RBMY1DP0C7P1 496 aaKnown RBP8.65□□□□□ -1.02
TRAPPC12-219ENST00000479955 FRMD6-AS1P0C7T7 363 aa8.65□□□□□ -1.02
TRAPPC12-219ENST00000479955 CT45A10P0DMU9 189 aa8.65□□□□□ -1.02
TRAPPC12-219ENST00000479955 CDKN1BP46527 198 aa8.65□□□□□ -1.02
TRAPPC12-219ENST00000479955 TAS2R60P59551 318 aa8.65□□□□□ -1.02
TRAPPC12-219ENST00000479955 ERCC8Q13216 396 aa8.65□□□□□ -1.02
TRAPPC12-219ENST00000479955 MRAPQ8TCY5 172 aa8.65□□□□□ -1.02
TRAPPC12-219ENST00000479955 ZFP30Q9Y2G7 519 aa8.65□□□□□ -1.02
TRAPPC12-219ENST00000479955 SCO2A0A1W2PP80 73 aa8.64□□□□□ -1.03
TRAPPC12-219ENST00000479955 CRISP2P16562 243 aa8.64□□□□□ -1.03
TRAPPC12-219ENST00000479955 DEFA6Q01524 100 aa8.64□□□□□ -1.03
TRAPPC12-219ENST00000479955 AMTNQ6UX39 209 aa8.64□□□□□ -1.03
TRAPPC12-219ENST00000479955 PRNTQ86SH4 94 aa8.64□□□□□ -1.03
TRAPPC12-219ENST00000479955 C2CD4CQ8TF44 421 aa8.64□□□□□ -1.03
TRAPPC12-219ENST00000479955 TRAV8-1A0A0A6YYK1 113 aa8.63□□□□□ -1.03
TRAPPC12-219ENST00000479955 CA1P00915 261 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC12-219ENST00000479955 IGLV2-11P01706 119 aa8.63□□□□□ -1.03
TRAPPC12-219ENST00000479955 GPX1P07203 203 aa8.63□□□□□ -1.03
TRAPPC12-219ENST00000479955 UQCC3Q6UW78 93 aa8.63□□□□□ -1.03
TRAPPC12-219ENST00000479955 Q6ZWC4 215 aa8.63□□□□□ -1.03
TRAPPC12-219ENST00000479955 FAM19A4Q96LR4 140 aa8.63□□□□□ -1.03
TRAPPC12-219ENST00000479955 LINC00479Q96M42 142 aa8.63□□□□□ -1.03
TRAPPC12-219ENST00000479955 C20orf144Q9BQM9 153 aa8.63□□□□□ -1.03
TRAPPC12-219ENST00000479955 SLC35B3Q9H1N7 401 aa8.63□□□□□ -1.03
TRAPPC12-219ENST00000479955 TREM1Q9NP99 234 aa8.63□□□□□ -1.03
TRAPPC12-219ENST00000479955 TRAV34A0A0B4J273 112 aa8.62□□□□□ -1.03
TRAPPC12-219ENST00000479955 LINC00862A6NCI5 91 aa8.62□□□□□ -1.03
TRAPPC12-219ENST00000479955 SRP19P09132 144 aaKnown RBP8.62□□□□□ -1.03
TRAPPC12-219ENST00000479955 PRB4P10163 310 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC12-219ENST00000479955 RPL35P42766 123 aaKnown RBP8.62□□□□□ -1.03
TRAPPC12-219ENST00000479955 SPINK13Q1W4C9 94 aa8.62□□□□□ -1.03
TRAPPC12-219ENST00000479955 FAM74A3Q4VXF1 159 aa8.62□□□□□ -1.03
TRAPPC12-219ENST00000479955 SMIM12Q96EX1 92 aa8.62□□□□□ -1.03
TRAPPC12-219ENST00000479955 SGK494Q96LW2 274 aa8.62□□□□□ -1.03
TRAPPC12-219ENST00000479955 IGF2BP2-AS1Q96M15 143 aa8.62□□□□□ -1.03
TRAPPC12-219ENST00000479955 AGRNO00468 2067 aa8.61□□□□□ -1.03
TRAPPC12-219ENST00000479955 KLLNB2CW77 178 aa8.61□□□□□ -1.03
TRAPPC12-219ENST00000479955 INSP01308 110 aa8.61□□□□□ -1.03
TRAPPC12-219ENST00000479955 LTAP01374 205 aa8.61□□□□□ -1.03
TRAPPC12-219ENST00000479955 SMUG1Q53HV7 270 aa8.61□□□□□ -1.03
TRAPPC12-219ENST00000479955 Q86TA4 180 aa8.61□□□□□ -1.03
TRAPPC12-219ENST00000479955 BAGE2Q86Y30 109 aa8.61□□□□□ -1.03
TRAPPC12-219ENST00000479955 TMEM183AQ8IXX5 376 aa8.61□□□□□ -1.03
TRAPPC12-219ENST00000479955 TMEM256Q8N2U0 113 aa8.61□□□□□ -1.03
TRAPPC12-219ENST00000479955 Q8TAT8 98 aa8.61□□□□□ -1.03
TRAPPC12-219ENST00000479955 BIN3Q9NQY0 253 aa8.61□□□□□ -1.03
TRAPPC12-219ENST00000479955 XCL2Q9UBD3 114 aa8.61□□□□□ -1.03
TRAPPC12-219ENST00000479955 GOLT1BQ9Y3E0 138 aa8.61□□□□□ -1.03
TRAPPC12-219ENST00000479955 NBEAL1Q6ZS30 2694 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 C7orf71A4D174 169 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 C9JCJ5 164 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 M0R2Z0 102 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 GNG4P50150 75 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 CEBPGP53567 150 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 FXYD7P58549 80 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 ZNF674Q2M3X9 581 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 COX8CQ7Z4L0 72 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 EIF4E3Q8N5X7 224 aaKnown RBP8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 RCHY1Q96PM5 261 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 ASCL2Q99929 193 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 B9D2Q9BPU9 175 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 NIPSNAP3BQ9BS92 247 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 TMEM208Q9BTX3 173 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 PARLQ9H300 379 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms