RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 C9orf62Q8N4C0 152 aa7.84□□□□□ -1.15
ATG4B-219ENST00000479941 Q8NAQ8 132 aa7.84□□□□□ -1.15
ATG4B-219ENST00000479941 MUC7Q8TAX7 377 aa7.84□□□□□ -1.15
ATG4B-219ENST00000479941 TMEM208Q9BTX3 173 aa7.84□□□□□ -1.15
ATG4B-219ENST00000479941 MAP1LC3BQ9GZQ8 125 aa7.84□□□□□ -1.15
ATG4B-219ENST00000479941 AGPAT4-IT1Q9H0P7 198 aa7.84□□□□□ -1.15
ATG4B-219ENST00000479941 PLA2G2EQ9NZK7 142 aa7.84□□□□□ -1.15
ATG4B-219ENST00000479941 KMT2CQ8NEZ4 4911 aaKnown RBP7.83□□□□□ -1.16
ATG4B-219ENST00000479941 IGHV3OR16-12A0A075B7B8 117 aa7.83□□□□□ -1.16
ATG4B-219ENST00000479941 IGKV2-40A0A087WW87 121 aaPredicted RBP7.83□□□□□ -1.16
ATG4B-219ENST00000479941 IGHV4-28A0A0C4DH34 117 aa7.83□□□□□ -1.16
ATG4B-219ENST00000479941 TRBV7-9A0A0J9YWB2 115 aa7.83□□□□□ -1.16
ATG4B-219ENST00000479941 A0A1W2PRE2 83 aa7.83□□□□□ -1.16
ATG4B-219ENST00000479941 C3orf84H3BNL1 204 aa7.83□□□□□ -1.16
ATG4B-219ENST00000479941 IGKV2D-40P01614 121 aaPredicted RBP7.83□□□□□ -1.16
ATG4B-219ENST00000479941 NMBP08949 121 aa7.83□□□□□ -1.16
ATG4B-219ENST00000479941 FHITP49789 147 aa7.83□□□□□ -1.16
ATG4B-219ENST00000479941 RAB5CP51148 216 aa7.83□□□□□ -1.16
ATG4B-219ENST00000479941 ERCC8Q13216 396 aa7.83□□□□□ -1.16
ATG4B-219ENST00000479941 TMEM256Q8N2U0 113 aa7.83□□□□□ -1.16
ATG4B-219ENST00000479941 FAM213BQ8TBF2 198 aa7.83□□□□□ -1.16
ATG4B-219ENST00000479941 MBD3L1Q8WWY6 194 aa7.83□□□□□ -1.16
ATG4B-219ENST00000479941 C20orf144Q9BQM9 153 aa7.83□□□□□ -1.16
ATG4B-219ENST00000479941 SERTM2A0A1B0GWG4 89 aa7.82□□□□□ -1.16
ATG4B-219ENST00000479941 TMEM189A5PLL7 270 aa7.82□□□□□ -1.16
ATG4B-219ENST00000479941 HBE1P02100 147 aa7.82□□□□□ -1.16
ATG4B-219ENST00000479941 CRISP2P16562 243 aa7.82□□□□□ -1.16
ATG4B-219ENST00000479941 ZNF138P52744 262 aa7.82□□□□□ -1.16
ATG4B-219ENST00000479941 FGF8P55075 233 aaPredicted RBP7.82□□□□□ -1.16
ATG4B-219ENST00000479941 SUMO1P63165 101 aaKnown RBP7.82□□□□□ -1.16
ATG4B-219ENST00000479941 C5orf17Q8NAS9 161 aa7.82□□□□□ -1.16
ATG4B-219ENST00000479941 FAM19A4Q96LR4 140 aa7.82□□□□□ -1.16
ATG4B-219ENST00000479941 VGLL1Q99990 258 aa7.82□□□□□ -1.16
ATG4B-219ENST00000479941 NKX6-2Q9C056 277 aaPredicted RBP7.82□□□□□ -1.16
ATG4B-219ENST00000479941 TMPRSS5Q9H3S3 457 aa7.82□□□□□ -1.16
ATG4B-219ENST00000479941 ZNF492Q9P255 531 aa7.82□□□□□ -1.16
ATG4B-219ENST00000479941 H7BYZ3 331 aa7.81□□□□□ -1.16
ATG4B-219ENST00000479941 DEFB4AO15263 64 aa7.81□□□□□ -1.16
ATG4B-219ENST00000479941 H2AFB1P0C5Y9 115 aa7.81□□□□□ -1.16
ATG4B-219ENST00000479941 RBMY1A1P0DJD3 496 aaKnown RBP7.81□□□□□ -1.16
ATG4B-219ENST00000479941 RBMY1CP0DJD4 496 aa7.81□□□□□ -1.16
ATG4B-219ENST00000479941 KIR3DS1Q14943 382 aa7.81□□□□□ -1.16
ATG4B-219ENST00000479941 RBMY1FQ15415 496 aaKnown RBP7.81□□□□□ -1.16
ATG4B-219ENST00000479941 RRN3P1Q2M238 152 aa7.81□□□□□ -1.16
ATG4B-219ENST00000479941 GFI1BQ5VTD9 330 aa7.81□□□□□ -1.16
ATG4B-219ENST00000479941 SFT2D1Q8WV19 159 aa7.81□□□□□ -1.16
ATG4B-219ENST00000479941 LINC01587Q99440 93 aa7.81□□□□□ -1.16
ATG4B-219ENST00000479941 RPH3ALQ9UNE2 315 aa7.81□□□□□ -1.16
ATG4B-219ENST00000479941 LENEPQ9Y5L5 61 aa7.81□□□□□ -1.16
ATG4B-219ENST00000479941 TENM2Q9NT68 2774 aa7.81□□□□□ -1.16
ATG4B-219ENST00000479941 KLLNB2CW77 178 aa7.8□□□□□ -1.16
ATG4B-219ENST00000479941 GGTLC3B5MD39 225 aa7.8□□□□□ -1.16
ATG4B-219ENST00000479941 J3KRW8 73 aa7.8□□□□□ -1.16
ATG4B-219ENST00000479941 K7EQM0 130 aa7.8□□□□□ -1.16
ATG4B-219ENST00000479941 TCRAP04437 139 aa7.8□□□□□ -1.16
ATG4B-219ENST00000479941 GPX1P07203 203 aa7.8□□□□□ -1.16
ATG4B-219ENST00000479941 SULT1A2P50226 295 aa7.8□□□□□ -1.16
ATG4B-219ENST00000479941 TAS2R60P59551 318 aa7.8□□□□□ -1.16
ATG4B-219ENST00000479941 GOLT1AQ6ZVE7 132 aa7.8□□□□□ -1.16
ATG4B-219ENST00000479941 C11orf45Q8TAV5 145 aa7.8□□□□□ -1.16
ATG4B-219ENST00000479941 NIPSNAP3BQ9BS92 247 aa7.8□□□□□ -1.16
ATG4B-219ENST00000479941 EPDR1Q9UM22 224 aa7.8□□□□□ -1.16
ATG4B-219ENST00000479941 ARL2-SNX15V9GYD0 113 aa7.8□□□□□ -1.16
ATG4B-219ENST00000479941 SACSQ9NZJ4 4579 aa7.8□□□□□ -1.16
ATG4B-219ENST00000479941 TRAV12-3A0A0B4J271 114 aa7.79□□□□□ -1.16
ATG4B-219ENST00000479941 LOC102723971A0A1B0GUV8 181 aa7.79□□□□□ -1.16
ATG4B-219ENST00000479941 C7orf71A4D174 169 aa7.79□□□□□ -1.16
ATG4B-219ENST00000479941 FBLL1A6NHQ2 334 aaKnown RBP7.79□□□□□ -1.16
ATG4B-219ENST00000479941 FAM74A7A6NL05 159 aa7.79□□□□□ -1.16
ATG4B-219ENST00000479941 TEX46H3BTG2 121 aa7.79□□□□□ -1.16
ATG4B-219ENST00000479941 PPT1P50897 306 aa7.79□□□□□ -1.16
ATG4B-219ENST00000479941 UBE2G2P60604 165 aa7.79□□□□□ -1.16
ATG4B-219ENST00000479941 GNG5P63218 68 aa7.79□□□□□ -1.16
ATG4B-219ENST00000479941 CASC10Q5T4H9 136 aa7.79□□□□□ -1.16
ATG4B-219ENST00000479941 ZFAND2AQ8N6M9 145 aa7.79□□□□□ -1.16
ATG4B-219ENST00000479941 CYB561D1Q8N8Q1 229 aa7.79□□□□□ -1.16
ATG4B-219ENST00000479941 Q8TAT8 98 aa7.79□□□□□ -1.16
ATG4B-219ENST00000479941 ATG101Q9BSB4 218 aa7.79□□□□□ -1.16
ATG4B-219ENST00000479941 YTHDF2Q9Y5A9 579 aaKnown RBP7.79□□□□□ -1.16
ATG4B-219ENST00000479941 TRAV1-1A0A0B4J248 108 aa7.78□□□□□ -1.16
ATG4B-219ENST00000479941 TEX48A0A1B0GUV7 120 aa7.78□□□□□ -1.16
ATG4B-219ENST00000479941 CXorf65A6NEN9 183 aa7.78□□□□□ -1.16
ATG4B-219ENST00000479941 ZNF705GA8MUZ8 300 aaPredicted RBP7.78□□□□□ -1.16
ATG4B-219ENST00000479941 ZNF324O75467 553 aaPredicted RBP7.78□□□□□ -1.16
ATG4B-219ENST00000479941 IFNA7P01567 189 aa7.78□□□□□ -1.16
ATG4B-219ENST00000479941 RNASE4P34096 147 aaKnown RBP7.78□□□□□ -1.16
ATG4B-219ENST00000479941 NKX2-5P52952 324 aaPredicted RBP7.78□□□□□ -1.16
ATG4B-219ENST00000479941 ZNF493Q6ZR52 646 aa7.78□□□□□ -1.16
ATG4B-219ENST00000479941 HIST1H2BAQ96A08 127 aa7.78□□□□□ -1.16
ATG4B-219ENST00000479941 PYGO2Q9BRQ0 406 aa7.78□□□□□ -1.16
ATG4B-219ENST00000479941 TCEAL7Q9BRU2 100 aa7.78□□□□□ -1.16
ATG4B-219ENST00000479941 TRAV8-1A0A0A6YYK1 113 aa7.77□□□□□ -1.17
ATG4B-219ENST00000479941 A0A1B0GV50 99 aa7.77□□□□□ -1.17
ATG4B-219ENST00000479941 F6UZH7 168 aa7.77□□□□□ -1.17
ATG4B-219ENST00000479941 SPART-AS1P0CW21 52 aa7.77□□□□□ -1.17
ATG4B-219ENST00000479941 HTN1P15515 57 aa7.77□□□□□ -1.17
ATG4B-219ENST00000479941 EMP1P54849 157 aa7.77□□□□□ -1.17
ATG4B-219ENST00000479941 BTN1A1Q13410 526 aa7.77□□□□□ -1.17
ATG4B-219ENST00000479941 CST9LP1Q5W188 147 aa7.77□□□□□ -1.17
ATG4B-219ENST00000479941 ZFAND6Q6FIF0 208 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms