RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 C7orf71A4D174 169 aa12.09□□□□□ -0.47
ECHDC1-216ENST00000479525 UPK1BO75841 260 aa12.09□□□□□ -0.47
ECHDC1-216ENST00000479525 HIST1H1EP10412 219 aaKnown RBP12.09□□□□□ -0.47
ECHDC1-216ENST00000479525 RNASE4P34096 147 aaKnown RBP12.09□□□□□ -0.47
ECHDC1-216ENST00000479525 ATP6V1FQ16864 119 aa12.09□□□□□ -0.47
ECHDC1-216ENST00000479525 LINC00612Q8N6U2 182 aa12.09□□□□□ -0.47
ECHDC1-216ENST00000479525 GNPNAT1Q96EK6 184 aaPredicted RBP12.09□□□□□ -0.47
ECHDC1-216ENST00000479525 FAM167A-AS1Q96KT0 104 aa12.09□□□□□ -0.47
ECHDC1-216ENST00000479525 C20orf144Q9BQM9 153 aa12.09□□□□□ -0.47
ECHDC1-216ENST00000479525 TP53TG3Q9ULZ0 132 aa12.09□□□□□ -0.47
ECHDC1-216ENST00000479525 CCL18P55774 89 aa12.08□□□□□ -0.48
ECHDC1-216ENST00000479525 SOHLH1Q5JUK2 328 aa12.08□□□□□ -0.48
ECHDC1-216ENST00000479525 Q8TAT8 98 aa12.08□□□□□ -0.48
ECHDC1-216ENST00000479525 S100ZQ8WXG8 99 aa12.08□□□□□ -0.48
ECHDC1-216ENST00000479525 PHYHIPLQ96FC7 376 aa12.08□□□□□ -0.48
ECHDC1-216ENST00000479525 KRTAP1-5Q9BYS1 174 aa12.08□□□□□ -0.48
ECHDC1-216ENST00000479525 SMIM3Q9BZL3 60 aa12.08□□□□□ -0.48
ECHDC1-216ENST00000479525 TMEM14CQ9P0S9 112 aa12.08□□□□□ -0.48
ECHDC1-216ENST00000479525 KLF12Q9Y4X4 402 aa12.08□□□□□ -0.48
ECHDC1-216ENST00000479525 RYR1P21817 5038 aa12.07□□□□□ -0.48
ECHDC1-216ENST00000479525 TRGV1A0A0A0MS02 117 aa12.06□□□□□ -0.48
ECHDC1-216ENST00000479525 E5RGE8 158 aa12.06□□□□□ -0.48
ECHDC1-216ENST00000479525 INMT-MINDY4F8WBC2 141 aa12.06□□□□□ -0.48
ECHDC1-216ENST00000479525 ZNF253O75346 499 aa12.06□□□□□ -0.48
ECHDC1-216ENST00000479525 IGHV3-53P01767 116 aa12.06□□□□□ -0.48
ECHDC1-216ENST00000479525 MED14OSP0DP75 135 aa12.06□□□□□ -0.48
ECHDC1-216ENST00000479525 H2BFSP57053 126 aa12.06□□□□□ -0.48
ECHDC1-216ENST00000479525 C6orf223Q8N319 242 aa12.06□□□□□ -0.48
ECHDC1-216ENST00000479525 C11orf72Q8NBR9 251 aa12.06□□□□□ -0.48
ECHDC1-216ENST00000479525 ODF3Q96PU9 254 aa12.06□□□□□ -0.48
ECHDC1-216ENST00000479525 PYGO2Q9BRQ0 406 aa12.06□□□□□ -0.48
ECHDC1-216ENST00000479525 KLLNB2CW77 178 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 ZNF324O75467 553 aaPredicted RBP12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 SLC25A5P05141 298 aaKnown RBP12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 M6PRP20645 277 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 ESRGQ1W209 222 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 RXFP4Q8TDU9 374 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 CHAC2Q8WUX2 184 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 MRPL53Q96EL3 112 aaKnown RBP12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 FAM19A4Q96LR4 140 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 NMES1Q9C002 83 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 WDR61Q9GZS3 305 aaKnown RBP12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 SLC25A31Q9H0C2 315 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 OR51M1Q9H341 326 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 AAMDCQ9H7C9 122 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 MPDU1O75352 247 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 GPX1P07203 203 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 NBEAP1P0C6P0 100 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 FAM3BP58499 235 aaPredicted RBP12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 ZFAND2AQ8N6M9 145 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 FXYD5Q96DB9 178 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 PAXXQ9BUH6 204 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 KRTAP4-5Q9BYR2 181 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 Q9H8V8 135 aa12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 MRPL16Q9NX20 251 aaKnown RBP12.05□□□□□ -0.48
ECHDC1-216ENST00000479525 LRP1BQ9NZR2 4599 aa12.04□□□□□ -0.48
ECHDC1-216ENST00000479525 TRGV2A0A075B6R0 118 aa12.04□□□□□ -0.48
ECHDC1-216ENST00000479525 OR7C2O60412 319 aa12.04□□□□□ -0.48
ECHDC1-216ENST00000479525 EIF4E3Q8N5X7 224 aaKnown RBP12.04□□□□□ -0.48
ECHDC1-216ENST00000479525 PPP1R1CQ8WVI7 109 aa12.04□□□□□ -0.48
ECHDC1-216ENST00000479525 ZNF503Q96F45 646 aa12.04□□□□□ -0.48
ECHDC1-216ENST00000479525 VSIG2Q96IQ7 327 aa12.04□□□□□ -0.48
ECHDC1-216ENST00000479525 PRELID1Q9Y255 219 aa12.04□□□□□ -0.48
ECHDC1-216ENST00000479525 HSPG2P98160 4391 aa12.03□□□□□ -0.48
ECHDC1-216ENST00000479525 PDE6HQ13956 83 aa12.03□□□□□ -0.48
ECHDC1-216ENST00000479525 FFAR4Q5NUL3 377 aa12.03□□□□□ -0.48
ECHDC1-216ENST00000479525 MUC21Q5SSG8 566 aa12.03□□□□□ -0.48
ECHDC1-216ENST00000479525 TMEM78Q5T7P6 136 aa12.03□□□□□ -0.48
ECHDC1-216ENST00000479525 LINC00477Q96M19 166 aa12.03□□□□□ -0.48
ECHDC1-216ENST00000479525 FUT9Q9Y231 359 aa12.03□□□□□ -0.48
ECHDC1-216ENST00000479525 A0A096LPF7 62 aa12.02□□□□□ -0.49
ECHDC1-216ENST00000479525 A6NHS1 94 aa12.02□□□□□ -0.49
ECHDC1-216ENST00000479525 RGS13O14921 159 aa12.02□□□□□ -0.49
ECHDC1-216ENST00000479525 SSNA1O43805 119 aa12.02□□□□□ -0.49
ECHDC1-216ENST00000479525 RANP62826 216 aaKnown RBP12.02□□□□□ -0.49
ECHDC1-216ENST00000479525 DAZ2Q13117 558 aaKnown RBP12.02□□□□□ -0.49
ECHDC1-216ENST00000479525 C9orf47Q6ZRZ4 202 aa12.02□□□□□ -0.49
ECHDC1-216ENST00000479525 ZNF492Q9P255 531 aa12.02□□□□□ -0.49
ECHDC1-216ENST00000479525 RPH3ALQ9UNE2 315 aa12.02□□□□□ -0.49
ECHDC1-216ENST00000479525 C16orf90A8MZG2 172 aa12.01□□□□□ -0.49
ECHDC1-216ENST00000479525 ATP5SQ99766 215 aa12.01□□□□□ -0.49
ECHDC1-216ENST00000479525 HSPB11Q9Y547 144 aa12.01□□□□□ -0.49
ECHDC1-216ENST00000479525 ABCA13Q86UQ4 5058 aa12□□□□□ -0.49
ECHDC1-216ENST00000479525 CRISP2P16562 243 aa12□□□□□ -0.49
ECHDC1-216ENST00000479525 TCL1AP56279 114 aa12□□□□□ -0.49
ECHDC1-216ENST00000479525 UBE2L3P68036 154 aaKnown RBP12□□□□□ -0.49
ECHDC1-216ENST00000479525 LINC00299Q6ZSB3 139 aa12□□□□□ -0.49
ECHDC1-216ENST00000479525 ZNF680Q8NEM1 530 aa12□□□□□ -0.49
ECHDC1-216ENST00000479525 HYLS1Q96M11 299 aa12□□□□□ -0.49
ECHDC1-216ENST00000479525 MRPL32Q9BYC8 188 aaKnown RBP12□□□□□ -0.49
ECHDC1-216ENST00000479525 Q9H3A6 140 aa12□□□□□ -0.49
ECHDC1-216ENST00000479525 WFDC1Q9HC57 220 aa12□□□□□ -0.49
ECHDC1-216ENST00000479525 MBD2Q9UBB5 411 aa12□□□□□ -0.49
ECHDC1-216ENST00000479525 IGHV1OR15-1A0A075B7D0 117 aa11.99□□□□□ -0.49
ECHDC1-216ENST00000479525 SPINK4O60575 86 aa11.99□□□□□ -0.49
ECHDC1-216ENST00000479525 PRAF2O60831 178 aa11.99□□□□□ -0.49
ECHDC1-216ENST00000479525 MPC2O95563 127 aa11.99□□□□□ -0.49
ECHDC1-216ENST00000479525 PTTG2Q9NZH5 202 aa11.99□□□□□ -0.49
ECHDC1-216ENST00000479525 DNAH5Q8TE73 4624 aa11.99□□□□□ -0.49
ECHDC1-216ENST00000479525 C17orf112F2Z3M2 114 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms