RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 MIR17HGQ75NE6 70 aa15.89■□□□□ 0.13
C9orf3-216ENST00000478603 SSX7Q7RTT5 188 aa15.89■□□□□ 0.13
C9orf3-216ENST00000478603 PCLOQ9Y6V0 5065 aa15.89■□□□□ 0.13
C9orf3-216ENST00000478603 H0YIZ8 118 aa15.88■□□□□ 0.13
C9orf3-216ENST00000478603 UPK1BO75841 260 aa15.88■□□□□ 0.13
C9orf3-216ENST00000478603 SLC25A5P05141 298 aaKnown RBP15.88■□□□□ 0.13
C9orf3-216ENST00000478603 M6PRP20645 277 aa15.88■□□□□ 0.13
C9orf3-216ENST00000478603 IFITM3Q01628 133 aa15.88■□□□□ 0.13
C9orf3-216ENST00000478603 TNP2Q05952 138 aa15.88■□□□□ 0.13
C9orf3-216ENST00000478603 BTN1A1Q13410 526 aa15.88■□□□□ 0.13
C9orf3-216ENST00000478603 Q6ZTI0 123 aa15.88■□□□□ 0.13
C9orf3-216ENST00000478603 FAM167A-AS1Q96KT0 104 aa15.88■□□□□ 0.13
C9orf3-216ENST00000478603 SLC25A31Q9H0C2 315 aa15.88■□□□□ 0.13
C9orf3-216ENST00000478603 PRELID1Q9Y255 219 aa15.88■□□□□ 0.13
C9orf3-216ENST00000478603 KLLNB2CW77 178 aa15.87■□□□□ 0.13
C9orf3-216ENST00000478603 E5RGE8 158 aa15.87■□□□□ 0.13
C9orf3-216ENST00000478603 ICAM4Q14773 271 aa15.87■□□□□ 0.13
C9orf3-216ENST00000478603 FAM122CQ6P4D5 195 aa15.87■□□□□ 0.13
C9orf3-216ENST00000478603 RXFP4Q8TDU9 374 aa15.87■□□□□ 0.13
C9orf3-216ENST00000478603 FAM19A4Q96LR4 140 aa15.87■□□□□ 0.13
C9orf3-216ENST00000478603 LINC00477Q96M19 166 aa15.87■□□□□ 0.13
C9orf3-216ENST00000478603 NMES1Q9C002 83 aa15.87■□□□□ 0.13
C9orf3-216ENST00000478603 TMPRSS5Q9H3S3 457 aa15.87■□□□□ 0.13
C9orf3-216ENST00000478603 GSN-AS1Q9NRJ2 163 aa15.87■□□□□ 0.13
C9orf3-216ENST00000478603 IGKV2-40A0A087WW87 121 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-216ENST00000478603 ZNF324O75467 553 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-216ENST00000478603 IGKV2D-40P01614 121 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-216ENST00000478603 RNASE4P34096 147 aaKnown RBP15.86■□□□□ 0.13
C9orf3-216ENST00000478603 DAZ2Q13117 558 aaKnown RBP15.86■□□□□ 0.13
C9orf3-216ENST00000478603 C6orf223Q8N319 242 aa15.86■□□□□ 0.13
C9orf3-216ENST00000478603 AAMDCQ9H7C9 122 aa15.86■□□□□ 0.13
C9orf3-216ENST00000478603 C11orf72Q8NBR9 251 aa15.85■□□□□ 0.13
C9orf3-216ENST00000478603 VGLL1Q99990 258 aa15.85■□□□□ 0.13
C9orf3-216ENST00000478603 OR10J4P0C629 311 aa15.84■□□□□ 0.13
C9orf3-216ENST00000478603 C9orf47Q6ZRZ4 202 aa15.84■□□□□ 0.13
C9orf3-216ENST00000478603 WDR61Q9GZS3 305 aaKnown RBP15.84■□□□□ 0.13
C9orf3-216ENST00000478603 OR51M1Q9H341 326 aa15.84■□□□□ 0.13
C9orf3-216ENST00000478603 Q9H8V8 135 aa15.84■□□□□ 0.13
C9orf3-216ENST00000478603 INMT-MINDY4F8WBC2 141 aa15.83■□□□□ 0.12
C9orf3-216ENST00000478603 GPX1P07203 203 aa15.83■□□□□ 0.12
C9orf3-216ENST00000478603 NBEAP1P0C6P0 100 aa15.83■□□□□ 0.12
C9orf3-216ENST00000478603 PRR9Q5T870 116 aa15.83■□□□□ 0.12
C9orf3-216ENST00000478603 Q6ZQT7 251 aa15.83■□□□□ 0.12
C9orf3-216ENST00000478603 EIF4E3Q8N5X7 224 aaKnown RBP15.83■□□□□ 0.12
C9orf3-216ENST00000478603 ZNF680Q8NEM1 530 aa15.83■□□□□ 0.12
C9orf3-216ENST00000478603 ZNF503Q96F45 646 aa15.83■□□□□ 0.12
C9orf3-216ENST00000478603 PRAF2O60831 178 aa15.82■□□□□ 0.12
C9orf3-216ENST00000478603 CRISP2P16562 243 aa15.82■□□□□ 0.12
C9orf3-216ENST00000478603 H2BFSP57053 126 aa15.82■□□□□ 0.12
C9orf3-216ENST00000478603 ESRGQ1W209 222 aa15.82■□□□□ 0.12
C9orf3-216ENST00000478603 TMEM78Q5T7P6 136 aa15.82■□□□□ 0.12
C9orf3-216ENST00000478603 ZFAND2AQ8N6M9 145 aa15.82■□□□□ 0.12
C9orf3-216ENST00000478603 FXYD5Q96DB9 178 aa15.82■□□□□ 0.12
C9orf3-216ENST00000478603 LINC00467Q9BRT7 94 aa15.82■□□□□ 0.12
C9orf3-216ENST00000478603 PAXXQ9BUH6 204 aa15.82■□□□□ 0.12
C9orf3-216ENST00000478603 KLF12Q9Y4X4 402 aa15.82■□□□□ 0.12
C9orf3-216ENST00000478603 TRGV2A0A075B6R0 118 aa15.81■□□□□ 0.12
C9orf3-216ENST00000478603 TRGV1A0A0A0MS02 117 aa15.81■□□□□ 0.12
C9orf3-216ENST00000478603 CYCSP99999 105 aaKnown RBP15.81■□□□□ 0.12
C9orf3-216ENST00000478603 ANXA2RQ3ZCQ2 193 aa15.81■□□□□ 0.12
C9orf3-216ENST00000478603 PPP1R1CQ8WVI7 109 aa15.81■□□□□ 0.12
C9orf3-216ENST00000478603 PHYHIPLQ96FC7 376 aa15.81■□□□□ 0.12
C9orf3-216ENST00000478603 MRPL32Q9BYC8 188 aaKnown RBP15.81■□□□□ 0.12
C9orf3-216ENST00000478603 TP53TG3Q9ULZ0 132 aa15.81■□□□□ 0.12
C9orf3-216ENST00000478603 FUT9Q9Y231 359 aa15.81■□□□□ 0.12
C9orf3-216ENST00000478603 VSIG2Q96IQ7 327 aa15.8■□□□□ 0.12
C9orf3-216ENST00000478603 KRTAP1-5Q9BYS1 174 aa15.8■□□□□ 0.12
C9orf3-216ENST00000478603 KCNIP2Q9NS61 270 aa15.8■□□□□ 0.12
C9orf3-216ENST00000478603 ZNF492Q9P255 531 aa15.8■□□□□ 0.12
C9orf3-216ENST00000478603 H3BNG1 76 aa15.79■□□□□ 0.12
C9orf3-216ENST00000478603 Q8TAT8 98 aa15.79■□□□□ 0.12
C9orf3-216ENST00000478603 ATP5SQ99766 215 aa15.79■□□□□ 0.12
C9orf3-216ENST00000478603 RYR1P21817 5038 aa15.78■□□□□ 0.12
C9orf3-216ENST00000478603 A6NHS1 94 aa15.78■□□□□ 0.12
C9orf3-216ENST00000478603 C17orf112F2Z3M2 114 aa15.78■□□□□ 0.12
C9orf3-216ENST00000478603 RGS13O14921 159 aa15.78■□□□□ 0.12
C9orf3-216ENST00000478603 OR7C2O60412 319 aa15.78■□□□□ 0.12
C9orf3-216ENST00000478603 TCL1AP56279 114 aa15.78■□□□□ 0.12
C9orf3-216ENST00000478603 MARVELD1Q9BSK0 173 aa15.78■□□□□ 0.12
C9orf3-216ENST00000478603 SPINK4O60575 86 aa15.77■□□□□ 0.12
C9orf3-216ENST00000478603 NMBP08949 121 aa15.77■□□□□ 0.12
C9orf3-216ENST00000478603 C18orf15Q96N68 181 aa15.77■□□□□ 0.12
C9orf3-216ENST00000478603 UPK3BQ9BT76 320 aa15.77■□□□□ 0.12
C9orf3-216ENST00000478603 SMIM3Q9BZL3 60 aa15.77■□□□□ 0.12
C9orf3-216ENST00000478603 PTTG2Q9NZH5 202 aa15.77■□□□□ 0.12
C9orf3-216ENST00000478603 HSPB11Q9Y547 144 aa15.77■□□□□ 0.12
C9orf3-216ENST00000478603 IGHV1OR15-1A0A075B7D0 117 aa15.76■□□□□ 0.11
C9orf3-216ENST00000478603 A0A096LPF7 62 aa15.76■□□□□ 0.11
C9orf3-216ENST00000478603 C16orf90A8MZG2 172 aa15.76■□□□□ 0.11
C9orf3-216ENST00000478603 SSNA1O43805 119 aa15.76■□□□□ 0.11
C9orf3-216ENST00000478603 MPC2O95563 127 aa15.76■□□□□ 0.11
C9orf3-216ENST00000478603 ZNF138P52744 262 aa15.76■□□□□ 0.11
C9orf3-216ENST00000478603 RANP62826 216 aaKnown RBP15.76■□□□□ 0.11
C9orf3-216ENST00000478603 FFAR4Q5NUL3 377 aa15.76■□□□□ 0.11
C9orf3-216ENST00000478603 MRPL16Q9NX20 251 aaKnown RBP15.76■□□□□ 0.11
C9orf3-216ENST00000478603 MRPS16Q9Y3D3 137 aaKnown RBP15.76■□□□□ 0.11
C9orf3-216ENST00000478603 EIF3GO75821 320 aaKnown RBP eCLIP15.75■□□□□ 0.11
C9orf3-216ENST00000478603 IGHV3-53P01767 116 aa15.75■□□□□ 0.11
C9orf3-216ENST00000478603 UBE2L3P68036 154 aaKnown RBP15.75■□□□□ 0.11
C9orf3-216ENST00000478603 IBA57Q5T440 356 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms