RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 IGKV2D-40P01614 121 aaPredicted RBP5□□□□□ -1.61
BRCA1-215ENST00000478531 CD300CQ08708 224 aa5□□□□□ -1.61
BRCA1-215ENST00000478531 ERCC8Q13216 396 aa5□□□□□ -1.61
BRCA1-215ENST00000478531 TMUB2Q71RG4 321 aa5□□□□□ -1.61
BRCA1-215ENST00000478531 RAB24Q969Q5 203 aa5□□□□□ -1.61
BRCA1-215ENST00000478531 HYLS1Q96M11 299 aa5□□□□□ -1.61
BRCA1-215ENST00000478531 ACTR3CQ9C0K3 210 aaPredicted RBP5□□□□□ -1.61
BRCA1-215ENST00000478531 Q9H3A6 140 aa5□□□□□ -1.61
BRCA1-215ENST00000478531 RPH3ALQ9UNE2 315 aa5□□□□□ -1.61
BRCA1-215ENST00000478531 A8MTW9 85 aa5□□□□□ -1.61
BRCA1-215ENST00000478531 ZNF705EA8MWA4 302 aaPredicted RBP5□□□□□ -1.61
BRCA1-215ENST00000478531 STAG3L2P0CL84 134 aa5□□□□□ -1.61
BRCA1-215ENST00000478531 STAG3L3P0CL85 134 aa5□□□□□ -1.61
BRCA1-215ENST00000478531 Q8NAQ8 132 aa5□□□□□ -1.61
BRCA1-215ENST00000478531 MRPL53Q96EL3 112 aaKnown RBP5□□□□□ -1.61
BRCA1-215ENST00000478531 C11orf68Q9H3H3 251 aaKnown RBP5□□□□□ -1.61
BRCA1-215ENST00000478531 GOLT1BQ9Y3E0 138 aa5□□□□□ -1.61
BRCA1-215ENST00000478531 X6R8D5 127 aa5□□□□□ -1.61
BRCA1-215ENST00000478531 SERTM2A0A1B0GWG4 89 aa4.99□□□□□ -1.61
BRCA1-215ENST00000478531 CXorf65A6NEN9 183 aa4.99□□□□□ -1.61
BRCA1-215ENST00000478531 SCGB1D1O95968 90 aa4.99□□□□□ -1.61
BRCA1-215ENST00000478531 C1QBP02746 253 aa4.99□□□□□ -1.61
BRCA1-215ENST00000478531 MIFP14174 115 aa4.99□□□□□ -1.61
BRCA1-215ENST00000478531 GCHFRP30047 84 aa4.99□□□□□ -1.61
BRCA1-215ENST00000478531 CDKN1BP46527 198 aa4.99□□□□□ -1.61
BRCA1-215ENST00000478531 CSN1S1P47710 185 aa4.99□□□□□ -1.61
BRCA1-215ENST00000478531 EMP1P54849 157 aa4.99□□□□□ -1.61
BRCA1-215ENST00000478531 FGF8P55075 233 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-215ENST00000478531 ZNF726P1Q15940 193 aa4.99□□□□□ -1.61
BRCA1-215ENST00000478531 IL17DQ8TAD2 202 aa4.99□□□□□ -1.61
BRCA1-215ENST00000478531 IGF2BP2-AS1Q96M15 143 aa4.99□□□□□ -1.61
BRCA1-215ENST00000478531 CTXND1A0A1B0GTU2 59 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 NPIPB6E9PJ23 425 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 C3orf84H3BNL1 204 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 CRXO43186 299 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-215ENST00000478531 CXorf1O96002 111 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 AMBPP02760 352 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 RBMY1A1P0DJD3 496 aaKnown RBP4.98□□□□□ -1.61
BRCA1-215ENST00000478531 RBMY1CP0DJD4 496 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 CT45A10P0DMU9 189 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 HTN1P15515 57 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 FHITP49789 147 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 SUMO1P63165 101 aaKnown RBP4.98□□□□□ -1.61
BRCA1-215ENST00000478531 KIR3DS1Q14943 382 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 RBMY1FQ15415 496 aaKnown RBP4.98□□□□□ -1.61
BRCA1-215ENST00000478531 FAM74A1Q5RGS3 127 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 CASC10Q5T4H9 136 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 TMEM78Q5T7P6 136 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 ZNF705AQ6ZN79 300 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-215ENST00000478531 C1orf158Q8N1D5 194 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 LYPD1Q8N2G4 141 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 Q8TAT8 98 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 CMTM2Q8TAZ6 248 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 VGLL1Q99990 258 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 A0A1B0GV50 99 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 LOC105371267A0A1B0GV96 52 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 MAP1LC3B2A6NCE7 125 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 PGPA6NDG6 321 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 HBE1P02100 147 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 PRM2P04554 102 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 TPT1P13693 172 aaKnown RBP4.98□□□□□ -1.61
BRCA1-215ENST00000478531 TSPOP30536 169 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 LEPP41159 167 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 NANOS2P60321 138 aaKnown RBP4.98□□□□□ -1.61
BRCA1-215ENST00000478531 GNG5P63218 68 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 LGALSLQ3ZCW2 172 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-215ENST00000478531 ZFP69Q49AA0 526 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 GFI1BQ5VTD9 330 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 FAM213BQ8TBF2 198 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 TMED6Q8WW62 240 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 MAP1LC3BQ9GZQ8 125 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 TMPRSS5Q9H3S3 457 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 OTORQ9NRC9 128 aa4.98□□□□□ -1.61
BRCA1-215ENST00000478531 ALMS1Q8TCU4 4167 aa4.97□□□□□ -1.61
BRCA1-215ENST00000478531 LOC102723971A0A1B0GUV8 181 aa4.97□□□□□ -1.61
BRCA1-215ENST00000478531 ZNF705GA8MUZ8 300 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-215ENST00000478531 DIRC3C9JPN6 131 aa4.97□□□□□ -1.61
BRCA1-215ENST00000478531 SLC25A5P05141 298 aaKnown RBP4.97□□□□□ -1.61
BRCA1-215ENST00000478531 UBE2G2P60604 165 aa4.97□□□□□ -1.61
BRCA1-215ENST00000478531 EIF5AP63241 154 aaKnown RBP4.97□□□□□ -1.61
BRCA1-215ENST00000478531 RRN3P1Q2M238 152 aa4.97□□□□□ -1.61
BRCA1-215ENST00000478531 GOLT1AQ6ZVE7 132 aa4.97□□□□□ -1.61
BRCA1-215ENST00000478531 C11orf45Q8TAV5 145 aa4.97□□□□□ -1.61
BRCA1-215ENST00000478531 LINC01587Q99440 93 aa4.97□□□□□ -1.61
BRCA1-215ENST00000478531 AGPAT4-IT1Q9H0P7 198 aa4.97□□□□□ -1.61
BRCA1-215ENST00000478531 TMEM167BQ9NRX6 74 aa4.97□□□□□ -1.61
BRCA1-215ENST00000478531 CELA1Q9UNI1 258 aa4.97□□□□□ -1.61
BRCA1-215ENST00000478531 TRAV12-3A0A0B4J271 114 aa4.96□□□□□ -1.61
BRCA1-215ENST00000478531 GGTLC3B5MD39 225 aa4.96□□□□□ -1.61
BRCA1-215ENST00000478531 SEC11BP0C7V7 166 aa4.96□□□□□ -1.61
BRCA1-215ENST00000478531 BTN1A1Q13410 526 aa4.96□□□□□ -1.61
BRCA1-215ENST00000478531 PET117Q6UWS5 81 aa4.96□□□□□ -1.61
BRCA1-215ENST00000478531 C9orf47Q6ZRZ4 202 aa4.96□□□□□ -1.61
BRCA1-215ENST00000478531 ZNF767PQ75MW2 155 aa4.96□□□□□ -1.61
BRCA1-215ENST00000478531 STOML3Q8TAV4 291 aa4.96□□□□□ -1.61
BRCA1-215ENST00000478531 RXFP4Q8TDU9 374 aa4.96□□□□□ -1.61
BRCA1-215ENST00000478531 LINC00477Q96M19 166 aa4.96□□□□□ -1.61
BRCA1-215ENST00000478531 ODF3Q96PU9 254 aa4.96□□□□□ -1.61
BRCA1-215ENST00000478531 NEU1Q99519 415 aa4.96□□□□□ -1.61
BRCA1-215ENST00000478531 TRAV8-1A0A0A6YYK1 113 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms