RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 KIR3DS1Q14943 382 aa7.42□□□□□ -1.22
HDAC6-222ENST00000478095 RBMY1FQ15415 496 aaKnown RBP7.42□□□□□ -1.22
HDAC6-222ENST00000478095 CDPF1Q6NVV7 123 aa7.42□□□□□ -1.22
HDAC6-222ENST00000478095 IL17DQ8TAD2 202 aa7.42□□□□□ -1.22
HDAC6-222ENST00000478095 IGF2BP2-AS1Q96M15 143 aa7.42□□□□□ -1.22
HDAC6-222ENST00000478095 TMEM208Q9BTX3 173 aa7.42□□□□□ -1.22
HDAC6-222ENST00000478095 C11orf68Q9H3H3 251 aaKnown RBP7.42□□□□□ -1.22
HDAC6-222ENST00000478095 GOLT1BQ9Y3E0 138 aa7.42□□□□□ -1.22
HDAC6-222ENST00000478095 C3orf84H3BNL1 204 aa7.41□□□□□ -1.22
HDAC6-222ENST00000478095 CXorf1O96002 111 aa7.41□□□□□ -1.22
HDAC6-222ENST00000478095 PRM2P04554 102 aa7.41□□□□□ -1.22
HDAC6-222ENST00000478095 CDKN1BP46527 198 aa7.41□□□□□ -1.22
HDAC6-222ENST00000478095 FHITP49789 147 aa7.41□□□□□ -1.22
HDAC6-222ENST00000478095 EMP1P54849 157 aa7.41□□□□□ -1.22
HDAC6-222ENST00000478095 FGF8P55075 233 aaPredicted RBP7.41□□□□□ -1.22
HDAC6-222ENST00000478095 LGALSLQ3ZCW2 172 aaPredicted RBP7.41□□□□□ -1.22
HDAC6-222ENST00000478095 CASC10Q5T4H9 136 aa7.41□□□□□ -1.22
HDAC6-222ENST00000478095 LYPD1Q8N2G4 141 aa7.41□□□□□ -1.22
HDAC6-222ENST00000478095 VGLL1Q99990 258 aa7.41□□□□□ -1.22
HDAC6-222ENST00000478095 AGPAT4-IT1Q9H0P7 198 aa7.41□□□□□ -1.22
HDAC6-222ENST00000478095 OTORQ9NRC9 128 aa7.41□□□□□ -1.22
HDAC6-222ENST00000478095 CTXND1A0A1B0GTU2 59 aa7.4□□□□□ -1.22
HDAC6-222ENST00000478095 PGPA6NDG6 321 aa7.4□□□□□ -1.22
HDAC6-222ENST00000478095 CXorf65A6NEN9 183 aa7.4□□□□□ -1.22
HDAC6-222ENST00000478095 LEPP41159 167 aa7.4□□□□□ -1.22
HDAC6-222ENST00000478095 CSN1S1P47710 185 aa7.4□□□□□ -1.22
HDAC6-222ENST00000478095 NANOS2P60321 138 aaKnown RBP7.4□□□□□ -1.22
HDAC6-222ENST00000478095 GNG5P63218 68 aa7.4□□□□□ -1.22
HDAC6-222ENST00000478095 TMEM78Q5T7P6 136 aa7.4□□□□□ -1.22
HDAC6-222ENST00000478095 GFI1BQ5VTD9 330 aa7.4□□□□□ -1.22
HDAC6-222ENST00000478095 Q8TAT8 98 aa7.4□□□□□ -1.22
HDAC6-222ENST00000478095 C11orf45Q8TAV5 145 aa7.4□□□□□ -1.22
HDAC6-222ENST00000478095 CMTM2Q8TAZ6 248 aa7.4□□□□□ -1.22
HDAC6-222ENST00000478095 TMED6Q8WW62 240 aa7.4□□□□□ -1.22
HDAC6-222ENST00000478095 TMPRSS5Q9H3S3 457 aa7.4□□□□□ -1.22
HDAC6-222ENST00000478095 MAP1LC3B2A6NCE7 125 aa7.39□□□□□ -1.23
HDAC6-222ENST00000478095 ZNF705GA8MUZ8 300 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-222ENST00000478095 DIRC3C9JPN6 131 aa7.39□□□□□ -1.23
HDAC6-222ENST00000478095 HBE1P02100 147 aa7.39□□□□□ -1.23
HDAC6-222ENST00000478095 SEC11BP0C7V7 166 aa7.39□□□□□ -1.23
HDAC6-222ENST00000478095 TPT1P13693 172 aaKnown RBP7.39□□□□□ -1.23
HDAC6-222ENST00000478095 HTN1P15515 57 aa7.39□□□□□ -1.23
HDAC6-222ENST00000478095 TSPOP30536 169 aa7.39□□□□□ -1.23
HDAC6-222ENST00000478095 EIF5AP63241 154 aaKnown RBP7.39□□□□□ -1.23
HDAC6-222ENST00000478095 ZFP69Q49AA0 526 aa7.39□□□□□ -1.23
HDAC6-222ENST00000478095 FAM74A1Q5RGS3 127 aa7.39□□□□□ -1.23
HDAC6-222ENST00000478095 GOLT1AQ6ZVE7 132 aa7.39□□□□□ -1.23
HDAC6-222ENST00000478095 FAM213BQ8TBF2 198 aa7.39□□□□□ -1.23
HDAC6-222ENST00000478095 LINC01587Q99440 93 aa7.39□□□□□ -1.23
HDAC6-222ENST00000478095 NEU1Q99519 415 aa7.39□□□□□ -1.23
HDAC6-222ENST00000478095 MAP1LC3BQ9GZQ8 125 aa7.39□□□□□ -1.23
HDAC6-222ENST00000478095 TMEM167BQ9NRX6 74 aa7.39□□□□□ -1.23
HDAC6-222ENST00000478095 CELA1Q9UNI1 258 aa7.39□□□□□ -1.23
HDAC6-222ENST00000478095 TRAV12-3A0A0B4J271 114 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 LOC102723971A0A1B0GUV8 181 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 A0A1B0GV50 99 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 SMIM9A6NGZ8 99 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 GGTLC3B5MD39 225 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 SLC25A5P05141 298 aaKnown RBP7.38□□□□□ -1.23
HDAC6-222ENST00000478095 UBE2G2P60604 165 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 BTN1A1Q13410 526 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 RRN3P1Q2M238 152 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 C9orf47Q6ZRZ4 202 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 ZNF767PQ75MW2 155 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 C9orf62Q8N4C0 152 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 STOML3Q8TAV4 291 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 SUN5Q8TC36 379 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 RXFP4Q8TDU9 374 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 LINC00477Q96M19 166 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 ODF3Q96PU9 254 aa7.38□□□□□ -1.23
HDAC6-222ENST00000478095 TRAV8-1A0A0A6YYK1 113 aa7.37□□□□□ -1.23
HDAC6-222ENST00000478095 AZU1P20160 251 aa7.37□□□□□ -1.23
HDAC6-222ENST00000478095 RNASE4P34096 147 aaKnown RBP7.37□□□□□ -1.23
HDAC6-222ENST00000478095 ZNF138P52744 262 aa7.37□□□□□ -1.23
HDAC6-222ENST00000478095 NKX2-5P52952 324 aaPredicted RBP7.37□□□□□ -1.23
HDAC6-222ENST00000478095 SUMO1P63165 101 aaKnown RBP7.37□□□□□ -1.23
HDAC6-222ENST00000478095 PRR9Q5T870 116 aa7.37□□□□□ -1.23
HDAC6-222ENST00000478095 FAM19A4Q96LR4 140 aa7.37□□□□□ -1.23
HDAC6-222ENST00000478095 SGK494Q96LW2 274 aa7.37□□□□□ -1.23
HDAC6-222ENST00000478095 ZNF492Q9P255 531 aa7.37□□□□□ -1.23
HDAC6-222ENST00000478095 YTHDF2Q9Y5A9 579 aaKnown RBP7.37□□□□□ -1.23
HDAC6-222ENST00000478095 STARD9Q9P2P6 4700 aa7.37□□□□□ -1.23
HDAC6-222ENST00000478095 C7orf71A4D174 169 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 RBAKDNA6NC62 111 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 KLLNB2CW77 178 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 UMAD1C9J7I0 102 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 H7BYZ3 331 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 GPX1P07203 203 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 CRISP2P16562 243 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 TAS2R60P59551 318 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 Q6ZQT7 251 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 Q6ZTC4 211 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 SLC51BQ86UW2 128 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 TMEM256Q8N2U0 113 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 ZFAND2AQ8N6M9 145 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 C5orf17Q8NAS9 161 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 SFT2D1Q8WV19 159 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 NIPSNAP3BQ9BS92 247 aa7.36□□□□□ -1.23
HDAC6-222ENST00000478095 DNAH7Q8WXX0 4024 aa7.35□□□□□ -1.23
HDAC6-222ENST00000478095 A0A1W2PRE2 83 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms