RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 K7EQD1 137 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 CIDEAO60543 219 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 B3GALNT1O75752 331 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 HLA-DMAP28067 261 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 HRH1P35367 487 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 NEDD8Q15843 81 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 ETFRF1Q6IPR1 90 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 CCDC71LQ8N9Z2 235 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 OR5H6Q8NGV6 325 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 ZFAND1Q8TCF1 268 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 RNASEH2CQ8TDP1 164 aaKnown RBP3.92□□□□□ -1.78
LINC00173-202ENST00000477702 C15orf40Q8WUR7 153 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 BLNKQ8WV28 456 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 SLC25A38Q96DW6 304 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 ZNF486Q96H40 463 aaPredicted RBP3.92□□□□□ -1.78
LINC00173-202ENST00000477702 PAXXQ9BUH6 204 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 COPZ2Q9P299 210 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 CACNG5Q9UF02 275 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 KLF12Q9Y4X4 402 aa3.92□□□□□ -1.78
LINC00173-202ENST00000477702 IGKV1D-37A0A075B6S9 117 aa3.91□□□□□ -1.78
LINC00173-202ENST00000477702 PIGBOS1A0A0B4J2F0 54 aa3.91□□□□□ -1.78
LINC00173-202ENST00000477702 A0A0G2JRQ6 117 aa3.91□□□□□ -1.78
LINC00173-202ENST00000477702 RCVRNP35243 200 aa3.91□□□□□ -1.78
LINC00173-202ENST00000477702 TRIM16LQ309B1 348 aa3.91□□□□□ -1.78
LINC00173-202ENST00000477702 C2orf83Q53S99 150 aa3.91□□□□□ -1.78
LINC00173-202ENST00000477702 LINC01556Q5JQF7 62 aa3.91□□□□□ -1.78
LINC00173-202ENST00000477702 STPG4Q8N801 248 aa3.91□□□□□ -1.78
LINC00173-202ENST00000477702 PCNPQ8WW12 178 aaKnown RBP3.91□□□□□ -1.78
LINC00173-202ENST00000477702 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
LINC00173-202ENST00000477702 MRPL16Q9NX20 251 aaKnown RBP3.91□□□□□ -1.78
LINC00173-202ENST00000477702 SNRPGP15A8MWD9 76 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 FAM25AB3EWG3 89 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 FAM25CB3EWG5 89 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 FAM25GB3EWG6 89 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 TNFAIP8O95379 198 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 APOA1P02647 267 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 FABP1P07148 127 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 TBPP20226 339 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 S100A7P31151 101 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 PIGPP57054 158 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 SPCS3P61009 180 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 SLAQ13239 276 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 RNASE10Q5GAN6 216 aaKnown RBP3.9□□□□□ -1.79
LINC00173-202ENST00000477702 SNX29P2Q8IUI4 249 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 FAM219AQ8IW50 185 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 C11orf72Q8NBR9 251 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 AP3S1Q92572 193 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 RPUSD4Q96CM3 377 aaKnown RBP3.9□□□□□ -1.79
LINC00173-202ENST00000477702 LINC01600Q96MT4 127 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 MRPL32Q9BYC8 188 aaKnown RBP3.9□□□□□ -1.79
LINC00173-202ENST00000477702 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.9□□□□□ -1.79
LINC00173-202ENST00000477702 COMMD3Q9UBI1 195 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 RPH3ALQ9UNE2 315 aa3.9□□□□□ -1.79
LINC00173-202ENST00000477702 C14orf166Q9Y224 244 aaKnown RBP3.9□□□□□ -1.79
LINC00173-202ENST00000477702 A0A087WXM4 84 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 TRGV4A0A0C4DH28 118 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 LOC100131303A0A0U1RQF7 123 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 C3orf85A0A1B0GTC6 90 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 CEBPZOSA8MTT3 80 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 C9JCJ5 164 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 SPINK4O60575 86 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 SFTA3P0C7M3 94 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 SMIM18P0DKX4 95 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 CXCL3P19876 107 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 PPT1P50897 306 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 RND3P61587 244 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 LSM3P62310 102 aaKnown RBP3.89□□□□□ -1.79
LINC00173-202ENST00000477702 TDRG1Q3Y452 100 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 OR1B1Q8NGR6 318 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 GPX8Q8TED1 209 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 TP53RKQ96S44 253 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 C20orf144Q9BQM9 153 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 KCNIP3Q9Y2W7 256 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 TMEM56-RWDD3S4R434 201 aa3.89□□□□□ -1.79
LINC00173-202ENST00000477702 TRAV8-6A0A0B4J262 113 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 LINC00854A0A1B0GVQ3 168 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 RNF222A6NCQ9 220 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 PMS2P5A8MQ11 134 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 GABARAPH6UMI1 98 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 PANO1I0J062 215 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 GABARAPO95166 117 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 ATP6V1G2O95670 118 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 PRSS1P07477 247 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 SNRPCP09234 159 aaKnown RBP3.88□□□□□ -1.79
LINC00173-202ENST00000477702 CFC1BP0CG36 223 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 CFC1P0CG37 223 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 ORM2P19652 201 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 KRTAP10-8P60410 259 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 MEF2DQ14814 521 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 SP6Q3SY56 376 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 SCGB2B2Q4G0G5 96 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 NMSQ5H8A3 153 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 OR10J3Q5JRS4 329 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 Q8N976 141 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 NHLRC2Q8NBF2 726 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 HSD17B11Q8NBQ5 300 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 TERB2Q8NHR7 220 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 LRRC20Q8TCA0 184 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 SLC35E1Q96K37 410 aa3.88□□□□□ -1.79
LINC00173-202ENST00000477702 SGK494Q96LW2 274 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms