RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TRAV8-1A0A0A6YYK1 113 aa10.01□□□□□ -0.81
RTFDC1-207ENST00000477573 J3QLI3 93 aa10.01□□□□□ -0.81
RTFDC1-207ENST00000477573 MALP21145 153 aa10.01□□□□□ -0.81
RTFDC1-207ENST00000477573 TRGV9Q99603 122 aa10.01□□□□□ -0.81
RTFDC1-207ENST00000477573 DKK2Q9UBU2 259 aa10.01□□□□□ -0.81
RTFDC1-207ENST00000477573 DMXL2Q8TDJ6 3036 aa10.01□□□□□ -0.81
RTFDC1-207ENST00000477573 DSPP15924 2871 aaKnown RBP10.01□□□□□ -0.81
RTFDC1-207ENST00000477573 PIEZO2Q9H5I5 2752 aa10.01□□□□□ -0.81
RTFDC1-207ENST00000477573 PTPRQQ9UMZ3 2332 aa10.01□□□□□ -0.81
RTFDC1-207ENST00000477573 TRAV2A0A0B4J234 112 aa10.01□□□□□ -0.81
RTFDC1-207ENST00000477573 TRAV8-4A0A0B4J246 113 aa10.01□□□□□ -0.81
RTFDC1-207ENST00000477573 PEX7O00628 323 aa10.01□□□□□ -0.81
RTFDC1-207ENST00000477573 P01737 135 aa10.01□□□□□ -0.81
RTFDC1-207ENST00000477573 IGKCP01834 107 aa10.01□□□□□ -0.81
RTFDC1-207ENST00000477573 DCHS1Q96JQ0 3298 aa10.01□□□□□ -0.81
RTFDC1-207ENST00000477573 LOC107984156A0A0G2JMH3 177 aa10□□□□□ -0.81
RTFDC1-207ENST00000477573 K7EMI3 77 aa10□□□□□ -0.81
RTFDC1-207ENST00000477573 RS1O15537 224 aa10□□□□□ -0.81
RTFDC1-207ENST00000477573 RPL13AP40429 203 aaKnown RBP10□□□□□ -0.81
RTFDC1-207ENST00000477573 HSPE1P61604 102 aaKnown RBP10□□□□□ -0.81
RTFDC1-207ENST00000477573 PAX8Q06710 450 aa10□□□□□ -0.81
RTFDC1-207ENST00000477573 SLC25A48Q6ZT89 311 aaKnown RBP10□□□□□ -0.81
RTFDC1-207ENST00000477573 TRPT1Q86TN4 253 aaKnown RBP10□□□□□ -0.81
RTFDC1-207ENST00000477573 ARL17AQ8IVW1 177 aa10□□□□□ -0.81
RTFDC1-207ENST00000477573 C1orf159Q96HA4 380 aa10□□□□□ -0.81
RTFDC1-207ENST00000477573 TMEM160Q9NX00 188 aa10□□□□□ -0.81
RTFDC1-207ENST00000477573 PRR14LQ5THK1 2151 aa10□□□□□ -0.81
RTFDC1-207ENST00000477573 ZGRF1Q86YA3 2104 aa10□□□□□ -0.81
RTFDC1-207ENST00000477573 DYSFO75923 2080 aa10□□□□□ -0.81
RTFDC1-207ENST00000477573 WI2-2373I1.2A0A1W2PRP0 233 aa9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 C19orf71A6NCJ1 209 aa9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 IFI27P40305 119 aaPredicted RBP9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 TWIST1Q15672 202 aa9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 ZNF493Q6ZR52 646 aa9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 A0A0G2JNJ9 132 aa9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 FAM240AA0A1B0GVK7 77 aa9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 OOEPA6NGQ2 149 aa9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 LINC01548A6NM66 108 aa9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 DLL1O00548 723 aa9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 IGHV3-13P01766 116 aa9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 UBE2D1P51668 147 aa9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 RIGQ13278 110 aa9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 DUX4L9Q6RFH8 374 aaPredicted RBP9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 NABP2Q9BQ15 211 aa9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 TTTY13Q9BZ97 58 aa9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 Q9UFV3 132 aa9.99□□□□□ -0.81
RTFDC1-207ENST00000477573 SLC25A20O43772 301 aa9.98□□□□□ -0.81
RTFDC1-207ENST00000477573 TCL1BO95988 128 aa9.98□□□□□ -0.81
RTFDC1-207ENST00000477573 FAM27E3Q08E93 113 aa9.98□□□□□ -0.81
RTFDC1-207ENST00000477573 PMVKQ15126 192 aa9.98□□□□□ -0.81
RTFDC1-207ENST00000477573 ZNF497Q6ZNH5 498 aa9.98□□□□□ -0.81
RTFDC1-207ENST00000477573 TMEM190Q8WZ59 177 aa9.98□□□□□ -0.81
RTFDC1-207ENST00000477573 MLST8Q9BVC4 326 aa9.98□□□□□ -0.81
RTFDC1-207ENST00000477573 PRNDQ9UKY0 176 aa9.98□□□□□ -0.81
RTFDC1-207ENST00000477573 IGHV3-64DA0A0J9YX35 117 aa9.98□□□□□ -0.81
RTFDC1-207ENST00000477573 DPM2O94777 84 aa9.98□□□□□ -0.81
RTFDC1-207ENST00000477573 CD7P09564 240 aa9.98□□□□□ -0.81
RTFDC1-207ENST00000477573 CRYGAP11844 174 aa9.98□□□□□ -0.81
RTFDC1-207ENST00000477573 IGFBPL1Q8WX77 278 aa9.98□□□□□ -0.81
RTFDC1-207ENST00000477573 TIMD4Q96H15 378 aa9.98□□□□□ -0.81
RTFDC1-207ENST00000477573 ATMQ13315 3056 aa9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 A0A1B0GUT8 65 aa9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 LINC01549A6NIU2 74 aa9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 H3BVH4 76 aa9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 FCER1GP30273 86 aa9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 ZFP2Q6ZN57 461 aa9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 C20orf204Q6ZNR8 217 aa9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 C11orf53Q8IXP5 236 aa9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 PRR7Q8TB68 274 aa9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 BSNQ9UPA5 3926 aa9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 TLN1Q9Y490 2541 aaKnown RBP9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 TMSB15BA0A087X1C1 80 aa9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 LGALS1P09382 135 aaKnown RBP9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 ZNF816Q0VGE8 651 aaPredicted RBP9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 GAGE2AQ6NT46 116 aa9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 ZNF826PQ6ZT77 177 aa9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 U3KQK5 164 aa9.97□□□□□ -0.81
RTFDC1-207ENST00000477573 TINCRA0A1B0GVN0 87 aa9.96□□□□□ -0.82
RTFDC1-207ENST00000477573 TMEM30CPA0ZSE6 113 aa9.96□□□□□ -0.82
RTFDC1-207ENST00000477573 TIMM23O14925 209 aa9.96□□□□□ -0.82
RTFDC1-207ENST00000477573 ATP5LO75964 103 aa9.96□□□□□ -0.82
RTFDC1-207ENST00000477573 CD40P25942 277 aa9.96□□□□□ -0.82
RTFDC1-207ENST00000477573 CNTFRP26992 372 aa9.96□□□□□ -0.82
RTFDC1-207ENST00000477573 LOXL1Q08397 574 aaPredicted RBP9.96□□□□□ -0.82
RTFDC1-207ENST00000477573 EIF4EBP1Q13541 118 aaPredicted RBP9.96□□□□□ -0.82
RTFDC1-207ENST00000477573 ZC2HC1BQ5TFG8 222 aa9.96□□□□□ -0.82
RTFDC1-207ENST00000477573 ASPHD1Q5U4P2 390 aa9.96□□□□□ -0.82
RTFDC1-207ENST00000477573 ZNF329Q86UD4 541 aa9.96□□□□□ -0.82
RTFDC1-207ENST00000477573 Q8N1Y9 231 aa9.96□□□□□ -0.82
RTFDC1-207ENST00000477573 IGLV3-9A0A075B6K5 115 aa9.95□□□□□ -0.82
RTFDC1-207ENST00000477573 IGHV3OR15-7A0A075B7D8 119 aa9.95□□□□□ -0.82
RTFDC1-207ENST00000477573 NCBP2LA6PVI3 153 aaKnown RBP9.95□□□□□ -0.82
RTFDC1-207ENST00000477573 TMEM258P61165 79 aa9.95□□□□□ -0.82
RTFDC1-207ENST00000477573 SPINK9Q5DT21 86 aa9.95□□□□□ -0.82
RTFDC1-207ENST00000477573 FAM90A1Q86YD7 464 aa9.95□□□□□ -0.82
RTFDC1-207ENST00000477573 POM121L12Q8N7R1 296 aa9.95□□□□□ -0.82
RTFDC1-207ENST00000477573 SPTBN4Q9H254 2564 aa9.95□□□□□ -0.82
RTFDC1-207ENST00000477573 CADP27708 2225 aa9.95□□□□□ -0.82
RTFDC1-207ENST00000477573 DIDO1Q9BTC0 2240 aaKnown RBP9.95□□□□□ -0.82
RTFDC1-207ENST00000477573 RBAKDNA6NC62 111 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms