RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 IMUPQ9GZP8 106 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 COMMD5Q9GZQ3 224 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 TMEM191AQ9H0A3 160 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 ATG5Q9H1Y0 275 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 C16orf95Q9H693 158 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 RPRMQ9NS64 109 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 FKBP11Q9NYL4 201 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 TAS2R8Q9NYW2 309 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 TAAR3PQ9P1P4 343 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 LAMTOR3Q9UHA4 124 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 FIS1Q9Y3D6 152 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 IER3IP1Q9Y5U9 82 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 COL6A6A6NMZ7 2263 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 PTPRDP23468 1912 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 NUP98P52948 1817 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 STRCQ7RTU9 1775 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 TET3O43151 1660 aa1□□□□□ -2.25
VPS50-213ENST00000477572 IQGAP3Q86VI3 1631 aa1□□□□□ -2.25
VPS50-213ENST00000477572 MROH1Q8NDA8 1641 aa1□□□□□ -2.25
VPS50-213ENST00000477572 DIP2BQ9P265 1576 aa1□□□□□ -2.25
VPS50-213ENST00000477572 TOP2AP11388 1531 aaKnown RBP1□□□□□ -2.25
VPS50-213ENST00000477572 ARHGAP5Q13017 1502 aa1□□□□□ -2.25
VPS50-213ENST00000477572 PLEKHH2Q8IVE3 1493 aa1□□□□□ -2.25
VPS50-213ENST00000477572 RGS12O14924 1447 aa1□□□□□ -2.25
VPS50-213ENST00000477572 EXPH5Q8NEV8 1989 aa1□□□□□ -2.25
VPS50-213ENST00000477572 IGHV1-58A0A0C4DH39 117 aa1□□□□□ -2.25
VPS50-213ENST00000477572 IGKV1-9A0A0C4DH69 117 aa1□□□□□ -2.25
VPS50-213ENST00000477572 A0A0D9SEW6 157 aa1□□□□□ -2.25
VPS50-213ENST00000477572 MUC21A0A0G2JKD1 596 aa1□□□□□ -2.25
VPS50-213ENST00000477572 MEIS3P1A6NDR6 274 aa1□□□□□ -2.25
VPS50-213ENST00000477572 OR2T8A6NH00 312 aa1□□□□□ -2.25
VPS50-213ENST00000477572 OOSP1A8MZH6 123 aa1□□□□□ -2.25
VPS50-213ENST00000477572 H3BQ15 152 aa1□□□□□ -2.25
VPS50-213ENST00000477572 BUB1B-PAK6H3BSN5 160 aa1□□□□□ -2.25
VPS50-213ENST00000477572 TMEM256-PLSCR3K7ERE1 68 aa1□□□□□ -2.25
VPS50-213ENST00000477572 PDCD5O14737 125 aa1□□□□□ -2.25
VPS50-213ENST00000477572 GEMIN2O14893 280 aaKnown RBP1□□□□□ -2.25
VPS50-213ENST00000477572 PLA2G10O15496 165 aa1□□□□□ -2.25
VPS50-213ENST00000477572 PITX3O75364 302 aa1□□□□□ -2.25
VPS50-213ENST00000477572 TNFP01375 233 aa1□□□□□ -2.25
VPS50-213ENST00000477572 IGLV3-27P01718 113 aa1□□□□□ -2.25
VPS50-213ENST00000477572 MT-ND6P03923 174 aa1□□□□□ -2.25
VPS50-213ENST00000477572 SLC25A5P05141 298 aaKnown RBP1□□□□□ -2.25
VPS50-213ENST00000477572 NMBP08949 121 aa1□□□□□ -2.25
VPS50-213ENST00000477572 IFITM1P13164 125 aa1□□□□□ -2.25
VPS50-213ENST00000477572 CRYGSP22914 178 aa1□□□□□ -2.25
VPS50-213ENST00000477572 RPL22P35268 128 aaKnown RBP1□□□□□ -2.25
VPS50-213ENST00000477572 CA7P43166 264 aa1□□□□□ -2.25
VPS50-213ENST00000477572 TMEM258P61165 79 aa1□□□□□ -2.25
VPS50-213ENST00000477572 RPL26P61254 145 aaKnown RBP1□□□□□ -2.25
VPS50-213ENST00000477572 DEFA5Q01523 94 aa1□□□□□ -2.25
VPS50-213ENST00000477572 KLRD1Q13241 179 aa1□□□□□ -2.25
VPS50-213ENST00000477572 RRN3P1Q2M238 152 aa1□□□□□ -2.25
VPS50-213ENST00000477572 TDRG1Q3Y452 100 aa1□□□□□ -2.25
VPS50-213ENST00000477572 C9orf153Q5TBE3 101 aa1□□□□□ -2.25
VPS50-213ENST00000477572 Q6AWC8 147 aa1□□□□□ -2.25
VPS50-213ENST00000477572 MRPL54Q6P161 138 aaKnown RBP1□□□□□ -2.25
VPS50-213ENST00000477572 C22orf39Q6P5X5 142 aa1□□□□□ -2.25
VPS50-213ENST00000477572 IZUMO2Q6UXV1 221 aa1□□□□□ -2.25
VPS50-213ENST00000477572 Q6ZUT4 128 aa1□□□□□ -2.25
VPS50-213ENST00000477572 AAED1Q7RTV5 226 aa1□□□□□ -2.25
VPS50-213ENST00000477572 GPHB5Q86YW7 130 aa1□□□□□ -2.25
VPS50-213ENST00000477572 ATOH7Q8N100 152 aa1□□□□□ -2.25
VPS50-213ENST00000477572 HIST3H2BBQ8N257 126 aa1□□□□□ -2.25
VPS50-213ENST00000477572 C10orf126Q8N4M7 172 aa1□□□□□ -2.25
VPS50-213ENST00000477572 KCNRGQ8N5I3 272 aa1□□□□□ -2.25
VPS50-213ENST00000477572 ZFAND2AQ8N6M9 145 aa1□□□□□ -2.25
VPS50-213ENST00000477572 LINC00301Q8NCQ3 95 aa1□□□□□ -2.25
VPS50-213ENST00000477572 WFDC5Q8TCV5 224 aa1□□□□□ -2.25
VPS50-213ENST00000477572 RPS4Y2Q8TD47 263 aa1□□□□□ -2.25
VPS50-213ENST00000477572 H1FXQ92522 213 aaKnown RBP1□□□□□ -2.25
VPS50-213ENST00000477572 LSM10Q969L4 123 aaKnown RBP1□□□□□ -2.25
VPS50-213ENST00000477572 TOMM6Q96B49 74 aa1□□□□□ -2.25
VPS50-213ENST00000477572 MRPS24Q96EL2 167 aaKnown RBP1□□□□□ -2.25
VPS50-213ENST00000477572 SNRNP25Q9BV90 132 aaKnown RBP1□□□□□ -2.25
VPS50-213ENST00000477572 SEC11CQ9BY50 192 aa1□□□□□ -2.25
VPS50-213ENST00000477572 RERGLQ9H628 205 aa1□□□□□ -2.25
VPS50-213ENST00000477572 NPVFQ9HCQ7 196 aa1□□□□□ -2.25
VPS50-213ENST00000477572 CKLFQ9UBR5 152 aa1□□□□□ -2.25
VPS50-213ENST00000477572 RPL26L1Q9UNX3 145 aaKnown RBP1□□□□□ -2.25
VPS50-213ENST00000477572 MRPS16Q9Y3D3 137 aaKnown RBP1□□□□□ -2.25
VPS50-213ENST00000477572 MPC1Q9Y5U8 109 aa1□□□□□ -2.25
VPS50-213ENST00000477572 LINC00312Q9Y6C7 94 aa1□□□□□ -2.25
VPS50-213ENST00000477572 KIF1AQ12756 1690 aa1□□□□□ -2.25
VPS50-213ENST00000477572 FREM1Q5H8C1 2179 aa1□□□□□ -2.25
VPS50-213ENST00000477572 RIMBP3CA6NJZ7 1639 aa1□□□□□ -2.25
VPS50-213ENST00000477572 RIMBP3BA6NNM3 1639 aa1□□□□□ -2.25
VPS50-213ENST00000477572 MADDQ8WXG6 1647 aa1□□□□□ -2.25
VPS50-213ENST00000477572 RIMBP3Q9UFD9 1639 aa1□□□□□ -2.25
VPS50-213ENST00000477572 ABCC3O15438 1527 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 MAPKBP1O60336 1514 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 PRDM15P57071 1507 aaPredicted RBP0.99□□□□□ -2.25
VPS50-213ENST00000477572 MLH3Q9UHC1 1453 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 CEP164Q9UPV0 1460 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 PATJQ8NI35 1801 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 A0A1B0GUL6 1792 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 LAMB4A4D0S4 1761 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 SUPT6HQ7KZ85 1726 aaKnown RBP0.99□□□□□ -2.25
VPS50-213ENST00000477572 MYO5CQ9NQX4 1742 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 TRBV20-1A0A075B6N2 111 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms