RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-215	ENST00000477547	PEX7	O00628	323 aa		11.23	□□□□□ -0.61
SEC13-215	ENST00000477547	NMB	P08949	121 aa		11.23	□□□□□ -0.61
SEC13-215	ENST00000477547	FXYD7	P58549	80 aa		11.23	□□□□□ -0.61
SEC13-215	ENST00000477547	SPINK13	Q1W4C9	94 aa		11.23	□□□□□ -0.61
SEC13-215	ENST00000477547	C9orf47	Q6ZRZ4	202 aa		11.23	□□□□□ -0.61
SEC13-215	ENST00000477547	ZNF767P	Q75MW2	155 aa		11.23	□□□□□ -0.61
SEC13-215	ENST00000477547	ARL6IP6	Q8N6S5	226 aa		11.23	□□□□□ -0.61
SEC13-215	ENST00000477547	CYB561D1	Q8N8Q1	229 aa		11.23	□□□□□ -0.61
SEC13-215	ENST00000477547	LYPD6B	Q8NI32	183 aa		11.23	□□□□□ -0.61
SEC13-215	ENST00000477547		Q8TAT8	98 aa		11.23	□□□□□ -0.61
SEC13-215	ENST00000477547	WWC2-AS2	Q96NR7	200 aa		11.23	□□□□□ -0.61
SEC13-215	ENST00000477547	ASCL2	Q99929	193 aa		11.23	□□□□□ -0.61
SEC13-215	ENST00000477547	TCEAL7	Q9BRU2	100 aa		11.23	□□□□□ -0.61
SEC13-215	ENST00000477547	CSTL1	Q9H114	145 aa		11.23	□□□□□ -0.61
SEC13-215	ENST00000477547	EPDR1	Q9UM22	224 aa		11.23	□□□□□ -0.61
SEC13-215	ENST00000477547		K7EQM0	130 aa		11.22	□□□□□ -0.61
SEC13-215	ENST00000477547		M0R2Z0	102 aa		11.22	□□□□□ -0.61
SEC13-215	ENST00000477547	DEFB135	Q30KP9	77 aa		11.22	□□□□□ -0.61
SEC13-215	ENST00000477547	SBSPON	Q8IVN8	264 aa		11.22	□□□□□ -0.61
SEC13-215	ENST00000477547	ODF3	Q96PU9	254 aa		11.22	□□□□□ -0.61
SEC13-215	ENST00000477547	AGPAT4-IT1	Q9H0P7	198 aa		11.22	□□□□□ -0.61
SEC13-215	ENST00000477547	TRAV8-1	A0A0A6YYK1	113 aa		11.21	□□□□□ -0.61
SEC13-215	ENST00000477547	LOC102723971	A0A1B0GUV8	181 aa		11.21	□□□□□ -0.61
SEC13-215	ENST00000477547	UBE2C	O00762	179 aa		11.21	□□□□□ -0.61
SEC13-215	ENST00000477547	IFITM2	Q01629	132 aa		11.21	□□□□□ -0.61
SEC13-215	ENST00000477547	MEF2B	Q02080	365 aa	Predicted RBP	11.21	□□□□□ -0.61
SEC13-215	ENST00000477547	CCDC28A	Q8IWP9	274 aa		11.21	□□□□□ -0.61
SEC13-215	ENST00000477547	HIST1H2BA	Q96A08	127 aa		11.21	□□□□□ -0.61
SEC13-215	ENST00000477547	LINC00477	Q96M19	166 aa		11.21	□□□□□ -0.61
SEC13-215	ENST00000477547	C1QTNF4	Q9BXJ3	329 aa		11.21	□□□□□ -0.61
SEC13-215	ENST00000477547	XCL2	Q9UBD3	114 aa		11.21	□□□□□ -0.61
SEC13-215	ENST00000477547	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.2	□□□□□ -0.62
SEC13-215	ENST00000477547	SCO2	A0A1W2PP80	73 aa		11.2	□□□□□ -0.62
SEC13-215	ENST00000477547		F6UZH7	168 aa		11.2	□□□□□ -0.62
SEC13-215	ENST00000477547	AMBP	P02760	352 aa		11.2	□□□□□ -0.62
SEC13-215	ENST00000477547	GIG44	P09565	113 aa	Predicted RBP	11.2	□□□□□ -0.62
SEC13-215	ENST00000477547	CT45A10	P0DMU9	189 aa		11.2	□□□□□ -0.62
SEC13-215	ENST00000477547	TSPO	P30536	169 aa		11.2	□□□□□ -0.62
SEC13-215	ENST00000477547	TAGLN2	P37802	199 aa	Known RBP	11.2	□□□□□ -0.62
SEC13-215	ENST00000477547	LEP	P41159	167 aa		11.2	□□□□□ -0.62
SEC13-215	ENST00000477547	AKR1C3	P42330	323 aa		11.2	□□□□□ -0.62
SEC13-215	ENST00000477547	ZNF138	P52744	262 aa		11.2	□□□□□ -0.62
SEC13-215	ENST00000477547	RAB14	P61106	215 aa		11.2	□□□□□ -0.62
SEC13-215	ENST00000477547	PMS2P11	Q13670	270 aa		11.2	□□□□□ -0.62
SEC13-215	ENST00000477547	TMEM75	Q8N9X5	138 aa		11.2	□□□□□ -0.62
SEC13-215	ENST00000477547	TXNDC17	Q9BRA2	123 aa		11.2	□□□□□ -0.62
SEC13-215	ENST00000477547	RETN	Q9HD89	108 aa		11.2	□□□□□ -0.62
SEC13-215	ENST00000477547	VAX2	Q9UIW0	290 aa		11.2	□□□□□ -0.62
SEC13-215	ENST00000477547		J3KRW8	73 aa		11.19	□□□□□ -0.62
SEC13-215	ENST00000477547	INS	P01308	110 aa		11.19	□□□□□ -0.62
SEC13-215	ENST00000477547	CDKN1B	P46527	198 aa		11.19	□□□□□ -0.62
SEC13-215	ENST00000477547	TOR2A	Q5JU69	321 aa		11.19	□□□□□ -0.62
SEC13-215	ENST00000477547	SGK494	Q96LW2	274 aa		11.19	□□□□□ -0.62
SEC13-215	ENST00000477547	SPATA25	Q9BR10	227 aa		11.19	□□□□□ -0.62
SEC13-215	ENST00000477547	ZNF492	Q9P255	531 aa		11.19	□□□□□ -0.62
SEC13-215	ENST00000477547	TRAV12-2	A0A075B6T6	113 aa		11.18	□□□□□ -0.62
SEC13-215	ENST00000477547	FLI1	Q01543	452 aa	Predicted RBP	11.18	□□□□□ -0.62
SEC13-215	ENST00000477547		Q6ZWC4	215 aa		11.18	□□□□□ -0.62
SEC13-215	ENST00000477547		Q86TA4	180 aa		11.18	□□□□□ -0.62
SEC13-215	ENST00000477547	C11orf52	Q96A22	123 aa		11.18	□□□□□ -0.62
SEC13-215	ENST00000477547	RCHY1	Q96PM5	261 aa		11.18	□□□□□ -0.62
SEC13-215	ENST00000477547	TM2D3	Q9BRN9	247 aa		11.18	□□□□□ -0.62
SEC13-215	ENST00000477547	NDFIP1	Q9BT67	221 aa		11.18	□□□□□ -0.62
SEC13-215	ENST00000477547	SACS	Q9NZJ4	4579 aa		11.18	□□□□□ -0.62
SEC13-215	ENST00000477547	TRAV34	A0A0B4J273	112 aa		11.17	□□□□□ -0.62
SEC13-215	ENST00000477547	RBFOX3	A6NFN3	312 aa		11.17	□□□□□ -0.62
SEC13-215	ENST00000477547	FBLL1	A6NHQ2	334 aa	Known RBP	11.17	□□□□□ -0.62
SEC13-215	ENST00000477547	IGLV2-11	P01706	119 aa		11.17	□□□□□ -0.62
SEC13-215	ENST00000477547	CRISP2	P16562	243 aa		11.17	□□□□□ -0.62
SEC13-215	ENST00000477547	UBE2G1	P62253	170 aa		11.17	□□□□□ -0.62
SEC13-215	ENST00000477547	ZNF506	Q5JVG8	444 aa		11.17	□□□□□ -0.62
SEC13-215	ENST00000477547	GFI1B	Q5VTD9	330 aa		11.17	□□□□□ -0.62
SEC13-215	ENST00000477547	PRNT	Q86SH4	94 aa		11.17	□□□□□ -0.62
SEC13-215	ENST00000477547	FAM19A4	Q96LR4	140 aa		11.17	□□□□□ -0.62
SEC13-215	ENST00000477547	IGF2BP2-AS1	Q96M15	143 aa		11.17	□□□□□ -0.62
SEC13-215	ENST00000477547	LINC00479	Q96M42	142 aa		11.17	□□□□□ -0.62
SEC13-215	ENST00000477547	FAM210A	Q96ND0	272 aa		11.17	□□□□□ -0.62
SEC13-215	ENST00000477547	PSG8	Q9UQ74	426 aa		11.17	□□□□□ -0.62
SEC13-215	ENST00000477547	TRBV7-9	A0A0J9YWB2	115 aa		11.16	□□□□□ -0.62
SEC13-215	ENST00000477547	CRX	O43186	299 aa	Predicted RBP	11.16	□□□□□ -0.62
SEC13-215	ENST00000477547	PDE6D	O43924	150 aa		11.16	□□□□□ -0.62
SEC13-215	ENST00000477547	ZFAND2A	Q8N6M9	145 aa		11.16	□□□□□ -0.62
SEC13-215	ENST00000477547	C2CD4C	Q8TF44	421 aa		11.16	□□□□□ -0.62
SEC13-215	ENST00000477547	FMC1	Q96HJ9	113 aa		11.16	□□□□□ -0.62
SEC13-215	ENST00000477547	RARRES2	Q99969	163 aa		11.16	□□□□□ -0.62
SEC13-215	ENST00000477547	ZMAT4	Q9H898	229 aa		11.16	□□□□□ -0.62
SEC13-215	ENST00000477547	LENEP	Q9Y5L5	61 aa		11.16	□□□□□ -0.62
SEC13-215	ENST00000477547	KLLN	B2CW77	178 aa		11.15	□□□□□ -0.62
SEC13-215	ENST00000477547	SPRY2	O43597	315 aa		11.15	□□□□□ -0.62
SEC13-215	ENST00000477547	BTN1A1	Q13410	526 aa		11.15	□□□□□ -0.62
SEC13-215	ENST00000477547	KIR3DS1	Q14943	382 aa		11.15	□□□□□ -0.62
SEC13-215	ENST00000477547	CLLU1	Q5K131	121 aa		11.15	□□□□□ -0.62
SEC13-215	ENST00000477547	PRR9	Q5T870	116 aa		11.15	□□□□□ -0.62
SEC13-215	ENST00000477547	CSNK1G2-AS1	Q8NCQ2	148 aa		11.15	□□□□□ -0.62
SEC13-215	ENST00000477547	RNF183	Q96D59	192 aa		11.15	□□□□□ -0.62
SEC13-215	ENST00000477547	EIF5A2	Q9GZV4	153 aa	Known RBP	11.15	□□□□□ -0.62
SEC13-215	ENST00000477547	TREM1	Q9NP99	234 aa		11.15	□□□□□ -0.62
SEC13-215	ENST00000477547	TP53TG1	Q9Y2A0	90 aa		11.15	□□□□□ -0.62
SEC13-215	ENST00000477547	GOLT1B	Q9Y3E0	138 aa		11.15	□□□□□ -0.62
SEC13-215	ENST00000477547	IGHV3OR16-12	A0A075B7B8	117 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms