RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 ZNF503Q96F45 646 aa11.52□□□□□ -0.57
HDAC6-220ENST00000477528 YPEL4Q96NS1 127 aa11.52□□□□□ -0.57
HDAC6-220ENST00000477528 IGHV1-24A0A0C4DH33 117 aa11.52□□□□□ -0.57
HDAC6-220ENST00000477528 LOC107984156A0A0G2JMH3 177 aa11.52□□□□□ -0.57
HDAC6-220ENST00000477528 ARL17AQ8IVW1 177 aa11.52□□□□□ -0.57
HDAC6-220ENST00000477528 ORAOV1Q8WV07 137 aa11.52□□□□□ -0.57
HDAC6-220ENST00000477528 LINC01549A6NIU2 74 aa11.52□□□□□ -0.57
HDAC6-220ENST00000477528 Q8N7P7 452 aa11.52□□□□□ -0.57
HDAC6-220ENST00000477528 KLF12Q9Y4X4 402 aa11.52□□□□□ -0.57
HDAC6-220ENST00000477528 SELENOKQ9Y6D0 94 aa11.52□□□□□ -0.57
HDAC6-220ENST00000477528 TNFRSF6BO95407 300 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 IGLC2P0DOY2 106 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 IGLC3P0DOY3 106 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 HSD52Q0P140 79 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 IGFBPL1Q8WX77 278 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 TRGV11A0A075B6L2 103 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 IGHV7-81A0A0B4J1V7 117 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 NDUFA4O00483 81 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 ZNF688P0C7X2 276 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 OR2K2Q8NGT1 345 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 WFDC12Q8WWY7 111 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 TNCP24821 2201 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 NUPR1O60356 82 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 VGLL1Q99990 258 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 IGKV1D-37A0A075B6S9 117 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 DLEU1O43261 78 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 FCN3O75636 299 aa11.51□□□□□ -0.57
HDAC6-220ENST00000477528 RPL13AP40429 203 aaKnown RBP11.51□□□□□ -0.57
HDAC6-220ENST00000477528 MCRIP2Q9BUT9 160 aaKnown RBP11.51□□□□□ -0.57
HDAC6-220ENST00000477528 CHTOPQ9Y3Y2 248 aaKnown RBP11.51□□□□□ -0.57
HDAC6-220ENST00000477528 AMMECR1LQ6DCA0 310 aa11.5□□□□□ -0.57
HDAC6-220ENST00000477528 TMEM158Q8WZ71 300 aa11.5□□□□□ -0.57
HDAC6-220ENST00000477528 LINC01587Q99440 93 aa11.5□□□□□ -0.57
HDAC6-220ENST00000477528 BPTFQ12830 3046 aa11.5□□□□□ -0.57
HDAC6-220ENST00000477528 MRPL51Q4U2R6 128 aaKnown RBP11.5□□□□□ -0.57
HDAC6-220ENST00000477528 MPV17L2Q567V2 206 aa11.5□□□□□ -0.57
HDAC6-220ENST00000477528 CREBBPQ92793 2442 aa11.5□□□□□ -0.57
HDAC6-220ENST00000477528 CENPVL3A0A0U1RRI6 287 aa11.49□□□□□ -0.57
HDAC6-220ENST00000477528 DTX2Q86UW9 622 aa11.49□□□□□ -0.57
HDAC6-220ENST00000477528 PIP4P2Q8N4L2 257 aa11.49□□□□□ -0.57
HDAC6-220ENST00000477528 GEMIN7Q9H840 131 aaKnown RBP11.49□□□□□ -0.57
HDAC6-220ENST00000477528 C14orf178Q8N769 122 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-220ENST00000477528 H3BUT2 72 aa11.48□□□□□ -0.57
HDAC6-220ENST00000477528 UBE2L6O14933 153 aa11.48□□□□□ -0.57
HDAC6-220ENST00000477528 TRAV12-3A0A0B4J271 114 aa11.48□□□□□ -0.57
HDAC6-220ENST00000477528 FSTL3O95633 263 aa11.48□□□□□ -0.57
HDAC6-220ENST00000477528 PRSS2P07478 247 aa11.48□□□□□ -0.57
HDAC6-220ENST00000477528 COTL1Q14019 142 aa11.48□□□□□ -0.57
HDAC6-220ENST00000477528 SPCS1Q9Y6A9 102 aa11.48□□□□□ -0.57
HDAC6-220ENST00000477528 CHD3Q12873 2000 aaKnown RBP11.48□□□□□ -0.57
HDAC6-220ENST00000477528 PTPRQQ9UMZ3 2332 aa11.47□□□□□ -0.57
HDAC6-220ENST00000477528 CTSGP08311 255 aa11.47□□□□□ -0.57
HDAC6-220ENST00000477528 KIR2DL5BA0A0G2JN68 375 aa11.47□□□□□ -0.57
HDAC6-220ENST00000477528 KIR2DL5BA0A0G2JPC4 375 aa11.47□□□□□ -0.57
HDAC6-220ENST00000477528 WI2-2373I1.2A0A1W2PRP0 233 aa11.47□□□□□ -0.57
HDAC6-220ENST00000477528 KIR2DL5AQ8N109 375 aa11.47□□□□□ -0.57
HDAC6-220ENST00000477528 A0A087X0K7 114 aa11.47□□□□□ -0.57
HDAC6-220ENST00000477528 GTSCR1Q86UQ5 136 aa11.47□□□□□ -0.57
HDAC6-220ENST00000477528 Q8N9W7 124 aa11.47□□□□□ -0.57
HDAC6-220ENST00000477528 MRAP2Q96G30 205 aa11.47□□□□□ -0.57
HDAC6-220ENST00000477528 SIGLEC8Q9NYZ4 499 aa11.47□□□□□ -0.57
HDAC6-220ENST00000477528 HLA-DMBP28068 263 aa11.46□□□□□ -0.57
HDAC6-220ENST00000477528 H3BUA1 57 aa11.46□□□□□ -0.57
HDAC6-220ENST00000477528 CIDEAO60543 219 aa11.46□□□□□ -0.57
HDAC6-220ENST00000477528 IGLL1P15814 213 aa11.46□□□□□ -0.57
HDAC6-220ENST00000477528 PRSS57Q6UWY2 283 aa11.46□□□□□ -0.57
HDAC6-220ENST00000477528 C19orf54Q5BKX5 351 aa11.46□□□□□ -0.58
HDAC6-220ENST00000477528 ARL6IP6Q8N6S5 226 aa11.46□□□□□ -0.58
HDAC6-220ENST00000477528 LY6G5BQ8NDX9 201 aa11.46□□□□□ -0.58
HDAC6-220ENST00000477528 ZFP36P26651 326 aaKnown RBP11.46□□□□□ -0.58
HDAC6-220ENST00000477528 PLNP26678 52 aa11.46□□□□□ -0.58
HDAC6-220ENST00000477528 H7C2G1 150 aa11.45□□□□□ -0.58
HDAC6-220ENST00000477528 ZNF124Q15973 351 aa11.45□□□□□ -0.58
HDAC6-220ENST00000477528 DYNAPQ8N1N2 210 aa11.45□□□□□ -0.58
HDAC6-220ENST00000477528 NHP2Q9NX24 153 aaKnown RBP11.45□□□□□ -0.58
HDAC6-220ENST00000477528 A0A1W2PRX2 142 aa11.45□□□□□ -0.58
HDAC6-220ENST00000477528 RBAKDNA6NC62 111 aa11.45□□□□□ -0.58
HDAC6-220ENST00000477528 EGR2P11161 476 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-220ENST00000477528 VCX2Q9H322 139 aa11.45□□□□□ -0.58
HDAC6-220ENST00000477528 ADAMTS20P59510 1910 aa11.45□□□□□ -0.58
HDAC6-220ENST00000477528 SNCGO76070 127 aa11.45□□□□□ -0.58
HDAC6-220ENST00000477528 COX6CP09669 75 aa11.45□□□□□ -0.58
HDAC6-220ENST00000477528 Q8N8P6 123 aa11.45□□□□□ -0.58
HDAC6-220ENST00000477528 MRPL53Q96EL3 112 aaKnown RBP11.45□□□□□ -0.58
HDAC6-220ENST00000477528 MRPL16Q9NX20 251 aaKnown RBP11.45□□□□□ -0.58
HDAC6-220ENST00000477528 VCYO14598 125 aa11.44□□□□□ -0.58
HDAC6-220ENST00000477528 FRMD6-AS1P0C7T7 363 aa11.44□□□□□ -0.58
HDAC6-220ENST00000477528 ESDP10768 282 aa11.44□□□□□ -0.58
HDAC6-220ENST00000477528 SPOCK3Q9BQ16 436 aa11.44□□□□□ -0.58
HDAC6-220ENST00000477528 YAE1D1Q9NRH1 226 aa11.44□□□□□ -0.58
HDAC6-220ENST00000477528 KIAA1549Q9HCM3 1950 aa11.44□□□□□ -0.58
HDAC6-220ENST00000477528 CIRBPQ14011 172 aaKnown RBP11.44□□□□□ -0.58
HDAC6-220ENST00000477528 ZNF48Q96MX3 618 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-220ENST00000477528 NPYP01303 97 aa11.44□□□□□ -0.58
HDAC6-220ENST00000477528 IGLV2-8P01709 118 aa11.44□□□□□ -0.58
HDAC6-220ENST00000477528 SYNJ2BPP57105 145 aa11.44□□□□□ -0.58
HDAC6-220ENST00000477528 ZC2HC1BQ5TFG8 222 aa11.44□□□□□ -0.58
HDAC6-220ENST00000477528 SP5Q6BEB4 398 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-220ENST00000477528 STHQ8IWL8 128 aa11.44□□□□□ -0.58
HDAC6-220ENST00000477528 GTSF1Q8WW33 167 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms