RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 DUX3Q96PT4 197 aa3.48□□□□□ -1.85
RGPD5-209ENST00000477523 TMEM208Q9BTX3 173 aa3.48□□□□□ -1.85
RGPD5-209ENST00000477523 SAMD10Q9BYL1 202 aa3.48□□□□□ -1.85
RGPD5-209ENST00000477523 AGPAT4-IT1Q9H0P7 198 aa3.48□□□□□ -1.85
RGPD5-209ENST00000477523 HIGD1CA8MV81 97 aa3.48□□□□□ -1.85
RGPD5-209ENST00000477523 CRISP2P16562 243 aa3.48□□□□□ -1.85
RGPD5-209ENST00000477523 CBLN1P23435 193 aa3.48□□□□□ -1.85
RGPD5-209ENST00000477523 HBBP68871 147 aa3.48□□□□□ -1.85
RGPD5-209ENST00000477523 CT83Q5H943 113 aa3.48□□□□□ -1.85
RGPD5-209ENST00000477523 V9GYV3 84 aa3.48□□□□□ -1.85
RGPD5-209ENST00000477523 GRIFINA4D1Z8 144 aa3.48□□□□□ -1.85
RGPD5-209ENST00000477523 IGKV3-20P01619 116 aa3.48□□□□□ -1.85
RGPD5-209ENST00000477523 CD33P20138 364 aa3.48□□□□□ -1.85
RGPD5-209ENST00000477523 ERCC8Q13216 396 aa3.48□□□□□ -1.85
RGPD5-209ENST00000477523 LGALS9O00182 355 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 REC114Q7Z4M0 266 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 OR8A1Q8NGG7 326 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 WFDC12Q8WWY7 111 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 VGLL1Q99990 258 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 U3KQE9 123 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 A0A1B0GUT8 65 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 RBAKDNA6NC62 111 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 TRGC1P0CF51 173 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 Q8N2B8 174 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 MRPL18Q9H0U6 180 aaKnown RBP3.47□□□□□ -1.85
RGPD5-209ENST00000477523 TRAV21A0A0B4J279 112 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 A0A1B0GW15 77 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 FAM231BA6NCW3 169 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 C2orf70A6NJV1 201 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 A8MWP6 167 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 APCSP02743 223 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 TYMSP04818 313 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 PDZD11Q5EBL8 140 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 CITED2Q99967 270 aaPredicted RBP3.47□□□□□ -1.85
RGPD5-209ENST00000477523 TRBV6-1A0A0K0K1D8 114 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 MRPS12O15235 138 aaKnown RBP3.47□□□□□ -1.85
RGPD5-209ENST00000477523 SH2D1AO60880 128 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 LEPP41159 167 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 SPANXN1Q5VSR9 72 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 FAM159AQ6UWV7 190 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 DCHS1Q96JQ0 3298 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 TMEM213A2RRL7 107 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 FER1L6-AS1Q8NA97 138 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 DLX4Q92988 240 aaPredicted RBP3.47□□□□□ -1.85
RGPD5-209ENST00000477523 ZC2HC1AQ96GY0 325 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 PYGO2Q9BRQ0 406 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 PRAC2D3DTV9 90 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 CCL24O00175 119 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 ASIPP42127 132 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 DEFB131AP59861 70 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 ATP5L2Q7Z4Y8 100 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 OR9G4Q8NGQ1 327 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 LENEPQ9Y5L5 61 aa3.47□□□□□ -1.85
RGPD5-209ENST00000477523 GCN1Q92616 2671 aaKnown RBP3.46□□□□□ -1.85
RGPD5-209ENST00000477523 TANC2Q9HCD6 1990 aa3.46□□□□□ -1.85
RGPD5-209ENST00000477523 HSBP1O75506 76 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 IGLV2-8P01709 118 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 ZNF705DP0CH99 300 aaPredicted RBP3.46□□□□□ -1.86
RGPD5-209ENST00000477523 ZNF705BP0CI00 300 aaPredicted RBP3.46□□□□□ -1.86
RGPD5-209ENST00000477523 KCNS1Q96KK3 526 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 GFRA4Q9GZZ7 299 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 ESM1Q9NQ30 184 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 F6UB75 175 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 NDUFA7O95182 113 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 CD28P10747 220 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 KRTAP1-1Q07627 177 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 KLF5Q13887 457 aaPredicted RBP3.46□□□□□ -1.86
RGPD5-209ENST00000477523 C8orf49Q96NF6 230 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 SMAD5-AS1Q9Y6J3 95 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 KMT2BQ9UMN6 2715 aaPredicted RBP3.46□□□□□ -1.86
RGPD5-209ENST00000477523 RNASE4P34096 147 aaKnown RBP3.46□□□□□ -1.86
RGPD5-209ENST00000477523 CMC4P56277 68 aaPredicted RBP3.46□□□□□ -1.86
RGPD5-209ENST00000477523 NUTF2P61970 127 aaKnown RBP3.46□□□□□ -1.86
RGPD5-209ENST00000477523 TMEM18Q96B42 140 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 SPAG8Q99932 426 aaPredicted RBP3.46□□□□□ -1.86
RGPD5-209ENST00000477523 KIAA1644Q3SXP7 199 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 MUC21Q5SSG8 566 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 CFAP47Q6ZTR5 3102 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 CRLF1O75462 422 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 HTN1P15515 57 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 SRIP30626 198 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 TMEM61Q8N0U2 210 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 NUP35Q8NFH5 326 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 MLST8Q9BVC4 326 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 MS4A6AQ9H2W1 248 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 NBEAQ8NFP9 2946 aa3.46□□□□□ -1.86
RGPD5-209ENST00000477523 OR11H12B2RN74 326 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 HIST1H2BKO60814 126 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 HIST1H2BJP06899 126 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 GZMBP10144 247 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 HIST1H2BOP23527 126 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 HIST1H2BBP33778 126 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 HIST1H2BDP58876 126 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 HIST1H2BCP62807 126 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 HIST2H2BEQ16778 126 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.45□□□□□ -1.86
RGPD5-209ENST00000477523 HIST1H2BHQ93079 126 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 HIST1H2BNQ99877 126 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 HIST1H2BMQ99879 126 aa3.45□□□□□ -1.86
RGPD5-209ENST00000477523 GPR61Q9BZJ8 451 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms