RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 SPINK13Q1W4C9 94 aa9.54□□□□□ -0.88
TOP3A-205ENST00000477508 ZNF705AQ6ZN79 300 aaPredicted RBP9.54□□□□□ -0.88
TOP3A-205ENST00000477508 IL17DQ8TAD2 202 aa9.54□□□□□ -0.88
TOP3A-205ENST00000477508 FAM213BQ8TBF2 198 aa9.54□□□□□ -0.88
TOP3A-205ENST00000477508 MBD3L1Q8WWY6 194 aa9.54□□□□□ -0.88
TOP3A-205ENST00000477508 NEU1Q99519 415 aa9.54□□□□□ -0.88
TOP3A-205ENST00000477508 C20orf144Q9BQM9 153 aa9.54□□□□□ -0.88
TOP3A-205ENST00000477508 TRBV7-9A0A0J9YWB2 115 aa9.53□□□□□ -0.88
TOP3A-205ENST00000477508 DIRC3C9JPN6 131 aa9.53□□□□□ -0.88
TOP3A-205ENST00000477508 TEX46H3BTG2 121 aa9.53□□□□□ -0.88
TOP3A-205ENST00000477508 M0R2Z0 102 aa9.53□□□□□ -0.88
TOP3A-205ENST00000477508 CT45A10P0DMU9 189 aa9.53□□□□□ -0.88
TOP3A-205ENST00000477508 SSX7Q7RTT5 188 aa9.53□□□□□ -0.88
TOP3A-205ENST00000477508 TMEM256Q8N2U0 113 aa9.53□□□□□ -0.88
TOP3A-205ENST00000477508 C5orf17Q8NAS9 161 aa9.53□□□□□ -0.88
TOP3A-205ENST00000477508 TMEM208Q9BTX3 173 aa9.53□□□□□ -0.88
TOP3A-205ENST00000477508 AGPAT4-IT1Q9H0P7 198 aa9.53□□□□□ -0.88
TOP3A-205ENST00000477508 C11orf68Q9H3H3 251 aaKnown RBP9.53□□□□□ -0.88
TOP3A-205ENST00000477508 IGKV2-40A0A087WW87 121 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-205ENST00000477508 K7EQM0 130 aa9.52□□□□□ -0.89
TOP3A-205ENST00000477508 CRXO43186 299 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-205ENST00000477508 IGKV2D-40P01614 121 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-205ENST00000477508 H2AFB1P0C5Y9 115 aa9.52□□□□□ -0.89
TOP3A-205ENST00000477508 FHITP49789 147 aa9.52□□□□□ -0.89
TOP3A-205ENST00000477508 SULT1A2P50226 295 aa9.52□□□□□ -0.89
TOP3A-205ENST00000477508 PPT1P50897 306 aa9.52□□□□□ -0.89
TOP3A-205ENST00000477508 ZNF138P52744 262 aa9.52□□□□□ -0.89
TOP3A-205ENST00000477508 TNP2Q05952 138 aa9.52□□□□□ -0.89
TOP3A-205ENST00000477508 SFT2D1Q8WV19 159 aa9.52□□□□□ -0.89
TOP3A-205ENST00000477508 LENEPQ9Y5L5 61 aa9.52□□□□□ -0.89
TOP3A-205ENST00000477508 ARL2-SNX15V9GYD0 113 aa9.52□□□□□ -0.89
TOP3A-205ENST00000477508 X6R8D5 127 aa9.52□□□□□ -0.89
TOP3A-205ENST00000477508 A0A0J9YWU9 116 aa9.51□□□□□ -0.89
TOP3A-205ENST00000477508 TMEM189A5PLL7 270 aa9.51□□□□□ -0.89
TOP3A-205ENST00000477508 FBLL1A6NHQ2 334 aaKnown RBP9.51□□□□□ -0.89
TOP3A-205ENST00000477508 CRISP2P16562 243 aa9.51□□□□□ -0.89
TOP3A-205ENST00000477508 FGF8P55075 233 aaPredicted RBP9.51□□□□□ -0.89
TOP3A-205ENST00000477508 SUMO1P63165 101 aaKnown RBP9.51□□□□□ -0.89
TOP3A-205ENST00000477508 ERCC8Q13216 396 aa9.51□□□□□ -0.89
TOP3A-205ENST00000477508 C1orf158Q8N1D5 194 aa9.51□□□□□ -0.89
TOP3A-205ENST00000477508 Q8NAQ8 132 aa9.51□□□□□ -0.89
TOP3A-205ENST00000477508 VGLL1Q99990 258 aa9.51□□□□□ -0.89
TOP3A-205ENST00000477508 ZNF492Q9P255 531 aa9.51□□□□□ -0.89
TOP3A-205ENST00000477508 TRAV12-2A0A075B6T6 113 aa9.5□□□□□ -0.89
TOP3A-205ENST00000477508 IGHV3OR16-12A0A075B7B8 117 aa9.5□□□□□ -0.89
TOP3A-205ENST00000477508 TRAV1-1A0A0B4J248 108 aa9.5□□□□□ -0.89
TOP3A-205ENST00000477508 HBE1P02100 147 aa9.5□□□□□ -0.89
TOP3A-205ENST00000477508 PRB4P10163 310 aaPredicted RBP9.5□□□□□ -0.89
TOP3A-205ENST00000477508 FAM19A4Q96LR4 140 aa9.5□□□□□ -0.89
TOP3A-205ENST00000477508 TCEAL7Q9BRU2 100 aa9.5□□□□□ -0.89
TOP3A-205ENST00000477508 TMPRSS5Q9H3S3 457 aa9.5□□□□□ -0.89
TOP3A-205ENST00000477508 EPDR1Q9UM22 224 aa9.5□□□□□ -0.89
TOP3A-205ENST00000477508 IGHV4-28A0A0C4DH34 117 aa9.49□□□□□ -0.89
TOP3A-205ENST00000477508 FAM74A7A6NL05 159 aa9.49□□□□□ -0.89
TOP3A-205ENST00000477508 KLLNB2CW77 178 aa9.49□□□□□ -0.89
TOP3A-205ENST00000477508 GGTLC3B5MD39 225 aa9.49□□□□□ -0.89
TOP3A-205ENST00000477508 C3orf84H3BNL1 204 aa9.49□□□□□ -0.89
TOP3A-205ENST00000477508 H7BYZ3 331 aa9.49□□□□□ -0.89
TOP3A-205ENST00000477508 IFNA7P01567 189 aa9.49□□□□□ -0.89
TOP3A-205ENST00000477508 RRN3P1Q2M238 152 aa9.49□□□□□ -0.89
TOP3A-205ENST00000477508 GFI1BQ5VTD9 330 aa9.49□□□□□ -0.89
TOP3A-205ENST00000477508 GOLT1AQ6ZVE7 132 aa9.49□□□□□ -0.89
TOP3A-205ENST00000477508 MUC7Q8TAX7 377 aa9.49□□□□□ -0.89
TOP3A-205ENST00000477508 LINC01587Q99440 93 aa9.49□□□□□ -0.89
TOP3A-205ENST00000477508 NIPSNAP3BQ9BS92 247 aa9.49□□□□□ -0.89
TOP3A-205ENST00000477508 ATG101Q9BSB4 218 aa9.49□□□□□ -0.89
TOP3A-205ENST00000477508 C7orf71A4D174 169 aa9.48□□□□□ -0.89
TOP3A-205ENST00000477508 F6UZH7 168 aa9.48□□□□□ -0.89
TOP3A-205ENST00000477508 TCRAP04437 139 aa9.48□□□□□ -0.89
TOP3A-205ENST00000477508 GPX1P07203 203 aa9.48□□□□□ -0.89
TOP3A-205ENST00000477508 NKX2-5P52952 324 aaPredicted RBP9.48□□□□□ -0.89
TOP3A-205ENST00000477508 TAS2R60P59551 318 aa9.48□□□□□ -0.89
TOP3A-205ENST00000477508 UBE2G2P60604 165 aa9.48□□□□□ -0.89
TOP3A-205ENST00000477508 CYB561D1Q8N8Q1 229 aa9.48□□□□□ -0.89
TOP3A-205ENST00000477508 HIST1H2BAQ96A08 127 aa9.48□□□□□ -0.89
TOP3A-205ENST00000477508 RPH3ALQ9UNE2 315 aa9.48□□□□□ -0.89
TOP3A-205ENST00000477508 YTHDF2Q9Y5A9 579 aaKnown RBP9.48□□□□□ -0.89
TOP3A-205ENST00000477508 TEX48A0A1B0GUV7 120 aa9.47□□□□□ -0.89
TOP3A-205ENST00000477508 RBMY1A1P0DJD3 496 aaKnown RBP9.47□□□□□ -0.89
TOP3A-205ENST00000477508 RBMY1CP0DJD4 496 aa9.47□□□□□ -0.89
TOP3A-205ENST00000477508 RBMY1FQ15415 496 aaKnown RBP9.47□□□□□ -0.89
TOP3A-205ENST00000477508 CST9LP1Q5W188 147 aa9.47□□□□□ -0.89
TOP3A-205ENST00000477508 ZFAND2AQ8N6M9 145 aa9.47□□□□□ -0.89
TOP3A-205ENST00000477508 PYGO2Q9BRQ0 406 aa9.47□□□□□ -0.89
TOP3A-205ENST00000477508 NDFIP1Q9BT67 221 aa9.47□□□□□ -0.89
TOP3A-205ENST00000477508 DNAH7Q8WXX0 4024 aa9.47□□□□□ -0.89
TOP3A-205ENST00000477508 TRAV12-3A0A0B4J271 114 aa9.46□□□□□ -0.9
TOP3A-205ENST00000477508 LOC102723971A0A1B0GUV8 181 aa9.46□□□□□ -0.9
TOP3A-205ENST00000477508 RNASE4P34096 147 aaKnown RBP9.46□□□□□ -0.9
TOP3A-205ENST00000477508 GNG5P63218 68 aa9.46□□□□□ -0.9
TOP3A-205ENST00000477508 ZNF493Q6ZR52 646 aa9.46□□□□□ -0.9
TOP3A-205ENST00000477508 CCDC28AQ8IWP9 274 aa9.46□□□□□ -0.9
TOP3A-205ENST00000477508 TMEM75Q8N9X5 138 aa9.46□□□□□ -0.9
TOP3A-205ENST00000477508 Q8TAT8 98 aa9.46□□□□□ -0.9
TOP3A-205ENST00000477508 C11orf45Q8TAV5 145 aa9.46□□□□□ -0.9
TOP3A-205ENST00000477508 MANBALQ9NQG1 85 aa9.46□□□□□ -0.9
TOP3A-205ENST00000477508 J3KRW8 73 aa9.45□□□□□ -0.9
TOP3A-205ENST00000477508 PEX7O00628 323 aa9.45□□□□□ -0.9
TOP3A-205ENST00000477508 DEFB4AO15263 64 aa9.45□□□□□ -0.9
TOP3A-205ENST00000477508 PAGE4O60829 102 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms