RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 A0A1W2PRX2 142 aa8.71□□□□□ -1.01
COL27A1-204ENST00000477421 ASIPP42127 132 aa8.71□□□□□ -1.01
COL27A1-204ENST00000477421 VGLL1Q99990 258 aa8.71□□□□□ -1.01
COL27A1-204ENST00000477421 JKAMPQ9P055 326 aa8.71□□□□□ -1.01
COL27A1-204ENST00000477421 GAGE10A6NGK3 116 aa8.71□□□□□ -1.02
COL27A1-204ENST00000477421 K7EIM0 57 aa8.71□□□□□ -1.02
COL27A1-204ENST00000477421 OVOL3O00110 214 aa8.71□□□□□ -1.02
COL27A1-204ENST00000477421 NDUFA3O95167 84 aa8.71□□□□□ -1.02
COL27A1-204ENST00000477421 ZNF256Q9Y2P7 627 aaPredicted RBP8.71□□□□□ -1.02
COL27A1-204ENST00000477421 CD7P09564 240 aa8.71□□□□□ -1.02
COL27A1-204ENST00000477421 TSPOP30536 169 aa8.71□□□□□ -1.02
COL27A1-204ENST00000477421 MPV17L2Q567V2 206 aa8.71□□□□□ -1.02
COL27A1-204ENST00000477421 IFI27L1Q96BM0 104 aa8.71□□□□□ -1.02
COL27A1-204ENST00000477421 A0A087X0K7 114 aa8.7□□□□□ -1.02
COL27A1-204ENST00000477421 OOSP1A8MZH6 123 aa8.7□□□□□ -1.02
COL27A1-204ENST00000477421 PRSS46E5RG02 174 aa8.7□□□□□ -1.02
COL27A1-204ENST00000477421 SYS1-DBNDD2H3BUS1 97 aa8.7□□□□□ -1.02
COL27A1-204ENST00000477421 HBDP02042 147 aa8.7□□□□□ -1.02
COL27A1-204ENST00000477421 UBE2E1P51965 193 aa8.7□□□□□ -1.02
COL27A1-204ENST00000477421 SNRPD3P62318 126 aaKnown RBP8.7□□□□□ -1.02
COL27A1-204ENST00000477421 DNLZQ5SXM8 178 aa8.7□□□□□ -1.02
COL27A1-204ENST00000477421 NUTF2P61970 127 aaKnown RBP8.7□□□□□ -1.02
COL27A1-204ENST00000477421 NRGNQ92686 78 aa8.7□□□□□ -1.02
COL27A1-204ENST00000477421 FCN3O75636 299 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 ZFP36P26651 326 aaKnown RBP8.69□□□□□ -1.02
COL27A1-204ENST00000477421 SFTA2Q6UW10 78 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 Q8N7P7 452 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 STPG4Q8N801 248 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 OR4X2Q8NGF9 303 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 HIST1H4GQ99525 98 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 COL5A1P20908 1838 aaPredicted RBP8.69□□□□□ -1.02
COL27A1-204ENST00000477421 H7C2G1 150 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 COA6Q5JTJ3 125 aaKnown RBP8.69□□□□□ -1.02
COL27A1-204ENST00000477421 Q5PR19 223 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 RASL11AQ6T310 242 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 IL17RELQ6ZVW7 336 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 CHCHD1Q96BP2 118 aaKnown RBP8.69□□□□□ -1.02
COL27A1-204ENST00000477421 MRPL27Q9P0M9 148 aaKnown RBP8.69□□□□□ -1.02
COL27A1-204ENST00000477421 IGKV1D-37A0A075B6S9 117 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 IGHV2-70DA0A0C4DH43 119 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 A0A1B0GW15 77 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 I3L2K1 104 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 PSMG4Q5JS54 123 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 GTF2H5Q6ZYL4 71 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 OR1N2Q8NGR9 330 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 SCGB3A1Q96QR1 104 aa8.69□□□□□ -1.02
COL27A1-204ENST00000477421 H3BRN7 92 aa8.68□□□□□ -1.02
COL27A1-204ENST00000477421 GP9P14770 177 aa8.68□□□□□ -1.02
COL27A1-204ENST00000477421 PRR25Q96S07 402 aa8.68□□□□□ -1.02
COL27A1-204ENST00000477421 TEX22C9J3V5 150 aa8.68□□□□□ -1.02
COL27A1-204ENST00000477421 FAM231DQ6ZW35 169 aa8.68□□□□□ -1.02
COL27A1-204ENST00000477421 LYPD1Q8N2G4 141 aa8.68□□□□□ -1.02
COL27A1-204ENST00000477421 C14orf178Q8N769 122 aaPredicted RBP8.68□□□□□ -1.02
COL27A1-204ENST00000477421 PRSS57Q6UWY2 283 aa8.68□□□□□ -1.02
COL27A1-204ENST00000477421 ZNF292O60281 2723 aa8.68□□□□□ -1.02
COL27A1-204ENST00000477421 TMEM170BQ5T4T1 132 aa8.67□□□□□ -1.02
COL27A1-204ENST00000477421 RHPN1-AS1Q9BWJ2 59 aa8.67□□□□□ -1.02
COL27A1-204ENST00000477421 COL4A2P08572 1712 aa8.67□□□□□ -1.02
COL27A1-204ENST00000477421 IGLL1P15814 213 aa8.67□□□□□ -1.02
COL27A1-204ENST00000477421 CDSNQ15517 529 aa8.67□□□□□ -1.02
COL27A1-204ENST00000477421 LINC00173Q6ZV60 143 aa8.67□□□□□ -1.02
COL27A1-204ENST00000477421 Q6ZVH6 145 aa8.67□□□□□ -1.02
COL27A1-204ENST00000477421 YPEL4Q96NS1 127 aa8.67□□□□□ -1.02
COL27A1-204ENST00000477421 KIR2DL4Q99706 377 aa8.67□□□□□ -1.02
COL27A1-204ENST00000477421 LOC107984156A0A0G2JMH3 177 aa8.67□□□□□ -1.02
COL27A1-204ENST00000477421 ARL17AQ8IVW1 177 aa8.67□□□□□ -1.02
COL27A1-204ENST00000477421 ITLN2Q8WWU7 325 aaPredicted RBP8.67□□□□□ -1.02
COL27A1-204ENST00000477421 USP34Q70CQ2 3546 aa8.67□□□□□ -1.02
COL27A1-204ENST00000477421 TRAV12-3A0A0B4J271 114 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 PRSS2P07478 247 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 JMJD8Q96S16 334 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 C2orf88Q9BSF0 95 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 PRRC2AP48634 2157 aaKnown RBP8.66□□□□□ -1.02
COL27A1-204ENST00000477421 IGHV7-81A0A0B4J1V7 117 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 OR11H12B2RN74 326 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 B4DSR2 109 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 PDE6HQ13956 83 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 LINC00322Q6ZN03 302 aaPredicted RBP8.66□□□□□ -1.02
COL27A1-204ENST00000477421 OR11H1Q8NG94 326 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 OR11H2Q8NH07 326 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 SRSF8Q9BRL6 282 aaKnown RBP8.66□□□□□ -1.02
COL27A1-204ENST00000477421 TRAV26-2A0A0B4J265 109 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 TRAV21A0A0B4J279 112 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 IGHV1-24A0A0C4DH33 117 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 LTAP01374 205 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 GTSCR1Q86UQ5 136 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 C8orf31Q8N9H6 132 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 OR11H6Q8NGC7 330 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 GTSF1Q8WW33 167 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 IGF2BP2-AS1Q96M15 143 aa8.66□□□□□ -1.02
COL27A1-204ENST00000477421 F6UB75 175 aa8.65□□□□□ -1.02
COL27A1-204ENST00000477421 IGLC2P0DOY2 106 aa8.65□□□□□ -1.02
COL27A1-204ENST00000477421 IGLC3P0DOY3 106 aa8.65□□□□□ -1.02
COL27A1-204ENST00000477421 HOXB4P17483 251 aaPredicted RBP8.65□□□□□ -1.02
COL27A1-204ENST00000477421 HERVK_113P61574 105 aa8.65□□□□□ -1.02
COL27A1-204ENST00000477421 BCL6BQ8N143 479 aaPredicted RBP8.65□□□□□ -1.02
COL27A1-204ENST00000477421 FAM110DQ8TAY7 271 aaPredicted RBP8.65□□□□□ -1.02
COL27A1-204ENST00000477421 ZNF492Q9P255 531 aa8.65□□□□□ -1.02
COL27A1-204ENST00000477421 IGHV1-69DA0A0B4J2H0 117 aa8.65□□□□□ -1.02
COL27A1-204ENST00000477421 IGHV4-61A0A0C4DH41 118 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms