RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 PI4KAP42356 2102 aa14.88□□□□□ -0.03
VARS2-209ENST00000477288 hADV29S1A0JD25 119 aa14.88□□□□□ -0.03
VARS2-209ENST00000477288 ARTNQ5T4W7 220 aa14.88□□□□□ -0.03
VARS2-209ENST00000477288 ANGP03950 147 aaKnown RBP14.88□□□□□ -0.03
VARS2-209ENST00000477288 Q6ZRM9 215 aa14.88□□□□□ -0.03
VARS2-209ENST00000477288 J3QLI3 93 aa14.87□□□□□ -0.03
VARS2-209ENST00000477288 UBL5Q9BZL1 73 aa14.87□□□□□ -0.03
VARS2-209ENST00000477288 QRFPP83859 136 aa14.87□□□□□ -0.03
VARS2-209ENST00000477288 ATP6V0BQ99437 205 aa14.87□□□□□ -0.03
VARS2-209ENST00000477288 C8orf86Q6ZUL3 223 aa14.87□□□□□ -0.03
VARS2-209ENST00000477288 IGKV1-39P01597 117 aa14.87□□□□□ -0.03
VARS2-209ENST00000477288 IGKV1D-39P04432 117 aa14.87□□□□□ -0.03
VARS2-209ENST00000477288 PRSS57Q6UWY2 283 aa14.87□□□□□ -0.03
VARS2-209ENST00000477288 UBE2BP63146 152 aa14.87□□□□□ -0.03
VARS2-209ENST00000477288 UBE2V1Q13404 147 aa14.87□□□□□ -0.03
VARS2-209ENST00000477288 DUX4L9Q6RFH8 374 aaPredicted RBP14.87□□□□□ -0.03
VARS2-209ENST00000477288 DSCR8Q96T75 97 aa14.87□□□□□ -0.03
VARS2-209ENST00000477288 FNDC10F2Z333 226 aa14.86□□□□□ -0.03
VARS2-209ENST00000477288 PRSS46E5RG02 174 aa14.86□□□□□ -0.03
VARS2-209ENST00000477288 FOXL2NBQ6ZUU3 175 aa14.86□□□□□ -0.03
VARS2-209ENST00000477288 SDHAF1A6NFY7 115 aa14.86□□□□□ -0.03
VARS2-209ENST00000477288 YPEL3P61236 119 aaPredicted RBP14.86□□□□□ -0.03
VARS2-209ENST00000477288 Q8N8P6 123 aa14.86□□□□□ -0.03
VARS2-209ENST00000477288 INAFM2P0DMQ5 153 aa14.85□□□□□ -0.03
VARS2-209ENST00000477288 RNASE13Q5GAN3 156 aaKnown RBP14.85□□□□□ -0.03
VARS2-209ENST00000477288 REG4Q9BYZ8 158 aa14.85□□□□□ -0.03
VARS2-209ENST00000477288 IGKV1OR2-108A0A075B7D4 117 aa14.85□□□□□ -0.03
VARS2-209ENST00000477288 TEX36Q5VZQ5 186 aa14.85□□□□□ -0.03
VARS2-209ENST00000477288 DEFB105AQ8NG35 78 aa14.85□□□□□ -0.03
VARS2-209ENST00000477288 Q8TCH9 128 aa14.85□□□□□ -0.03
VARS2-209ENST00000477288 ZSWIM8A7E2V4 1837 aa14.85□□□□□ -0.03
VARS2-209ENST00000477288 CDKN1BP46527 198 aa14.84□□□□□ -0.03
VARS2-209ENST00000477288 SMIM2Q9BVW6 85 aa14.84□□□□□ -0.03
VARS2-209ENST00000477288 Q6ZS49 121 aa14.84□□□□□ -0.03
VARS2-209ENST00000477288 FNDC1Q4ZHG4 1894 aaPredicted RBP14.84□□□□□ -0.03
VARS2-209ENST00000477288 NDUFA4O00483 81 aa14.84□□□□□ -0.03
VARS2-209ENST00000477288 IGKV2D-24A0A075B6R9 120 aa14.84□□□□□ -0.03
VARS2-209ENST00000477288 A0A0J9YY99 117 aa14.84□□□□□ -0.03
VARS2-209ENST00000477288 FAM120AOSQ5T036 256 aa14.83□□□□□ -0.04
VARS2-209ENST00000477288 ZNF833PQ6ZTB9 187 aa14.83□□□□□ -0.04
VARS2-209ENST00000477288 TINCRA0A1B0GVN0 87 aa14.83□□□□□ -0.04
VARS2-209ENST00000477288 FAM104BQ5XKR9 115 aa14.83□□□□□ -0.04
VARS2-209ENST00000477288 NDUFA4L2Q9NRX3 87 aa14.83□□□□□ -0.04
VARS2-209ENST00000477288 DOCK8Q8NF50 2099 aa14.83□□□□□ -0.04
VARS2-209ENST00000477288 FAM231BA6NCW3 169 aa14.82□□□□□ -0.04
VARS2-209ENST00000477288 ZNF664Q8N3J9 261 aa14.82□□□□□ -0.04
VARS2-209ENST00000477288 NDUFA12Q9UI09 145 aa14.82□□□□□ -0.04
VARS2-209ENST00000477288 A0A1B0GUS0 222 aa14.82□□□□□ -0.04
VARS2-209ENST00000477288 ZNF492Q9P255 531 aa14.82□□□□□ -0.04
VARS2-209ENST00000477288 TCF20Q9UGU0 1960 aaKnown RBP14.82□□□□□ -0.04
VARS2-209ENST00000477288 MRPL51Q4U2R6 128 aaKnown RBP14.82□□□□□ -0.04
VARS2-209ENST00000477288 PYY3Q5JQD4 70 aa14.82□□□□□ -0.04
VARS2-209ENST00000477288 TRBV19A0A075B6N1 114 aa14.82□□□□□ -0.04
VARS2-209ENST00000477288 FGF6P10767 208 aa14.82□□□□□ -0.04
VARS2-209ENST00000477288 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.81□□□□□ -0.04
VARS2-209ENST00000477288 LOXP28300 417 aaPredicted RBP14.81□□□□□ -0.04
VARS2-209ENST00000477288 IGFL3Q6UXB1 125 aa14.81□□□□□ -0.04
VARS2-209ENST00000477288 TMEM14BQ9NUH8 114 aa14.81□□□□□ -0.04
VARS2-209ENST00000477288 PRB1P04280 392 aa14.81□□□□□ -0.04
VARS2-209ENST00000477288 Q6ZR03 302 aa14.81□□□□□ -0.04
VARS2-209ENST00000477288 IGHG4P01861 327 aa14.8□□□□□ -0.04
VARS2-209ENST00000477288 Q9HAA7 133 aa14.8□□□□□ -0.04
VARS2-209ENST00000477288 IGLV2-23P01705 113 aa14.8□□□□□ -0.04
VARS2-209ENST00000477288 CRYGCP07315 174 aa14.8□□□□□ -0.04
VARS2-209ENST00000477288 RSPO3Q9BXY4 272 aaPredicted RBP14.8□□□□□ -0.04
VARS2-209ENST00000477288 DKK4Q9UBT3 224 aa14.8□□□□□ -0.04
VARS2-209ENST00000477288 CYYR1Q96J86 154 aa14.8□□□□□ -0.04
VARS2-209ENST00000477288 C17orf58Q2M2W7 97 aa14.8□□□□□ -0.04
VARS2-209ENST00000477288 DOPEY2Q9Y3R5 2298 aa14.79□□□□□ -0.04
VARS2-209ENST00000477288 MPDZO75970 2070 aa14.79□□□□□ -0.04
VARS2-209ENST00000477288 CACNA1BQ00975 2339 aa14.79□□□□□ -0.04
VARS2-209ENST00000477288 DIDO1Q9BTC0 2240 aaKnown RBP14.79□□□□□ -0.04
VARS2-209ENST00000477288 MYO7BQ6PIF6 2116 aa14.79□□□□□ -0.04
VARS2-209ENST00000477288 IGKV1-6A0A0C4DH72 117 aa14.79□□□□□ -0.04
VARS2-209ENST00000477288 PLXNA3P51805 1871 aa14.79□□□□□ -0.04
VARS2-209ENST00000477288 CT83Q5H943 113 aa14.79□□□□□ -0.04
VARS2-209ENST00000477288 C18orf32Q8TCD1 76 aa14.79□□□□□ -0.04
VARS2-209ENST00000477288 XCL1P47992 114 aa14.78□□□□□ -0.04
VARS2-209ENST00000477288 Q6ZQT7 251 aa14.78□□□□□ -0.04
VARS2-209ENST00000477288 TPSG1Q9NRR2 321 aa14.78□□□□□ -0.04
VARS2-209ENST00000477288 FER1L5A0AVI2 2057 aa14.78□□□□□ -0.04
VARS2-209ENST00000477288 CLPSL1A2RUU4 121 aa14.77□□□□□ -0.04
VARS2-209ENST00000477288 ASPHD1Q5U4P2 390 aa14.77□□□□□ -0.04
VARS2-209ENST00000477288 IGLV3-9A0A075B6K5 115 aa14.77□□□□□ -0.05
VARS2-209ENST00000477288 IGHV4-4A0A075B6R2 117 aa14.77□□□□□ -0.05
VARS2-209ENST00000477288 NOP10Q9NPE3 64 aaKnown RBP14.77□□□□□ -0.05
VARS2-209ENST00000477288 POLR3KQ9Y2Y1 108 aaPredicted RBP14.76□□□□□ -0.05
VARS2-209ENST00000477288 IGHV1-24A0A0C4DH33 117 aa14.76□□□□□ -0.05
VARS2-209ENST00000477288 IGHV7-4-1A0A0J9YVY3 117 aa14.76□□□□□ -0.05
VARS2-209ENST00000477288 RS1O15537 224 aa14.76□□□□□ -0.05
VARS2-209ENST00000477288 PKDREJQ9NTG1 2253 aa14.76□□□□□ -0.05
VARS2-209ENST00000477288 COL4A6Q14031 1691 aa14.76□□□□□ -0.05
VARS2-209ENST00000477288 TSSC4Q9Y5U2 329 aaPredicted RBP14.76□□□□□ -0.05
VARS2-209ENST00000477288 TRBV20-1A0A075B6N2 111 aa14.76□□□□□ -0.05
VARS2-209ENST00000477288 LMO1P25800 156 aa14.76□□□□□ -0.05
VARS2-209ENST00000477288 UTF1Q5T230 341 aa14.76□□□□□ -0.05
VARS2-209ENST00000477288 CARD19Q96LW7 228 aa14.75□□□□□ -0.05
VARS2-209ENST00000477288 PRR25Q96S07 402 aa14.75□□□□□ -0.05
VARS2-209ENST00000477288 TRAV13-2A0A0B4J235 113 aa14.75□□□□□ -0.05
VARS2-209ENST00000477288 H3BRN7 92 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms