RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 NDUFS6O75380 124 aaKnown RBP12.97□□□□□ -0.33
SREBF1-211ENST00000476994 IGLV2-11P01706 119 aa12.97□□□□□ -0.33
SREBF1-211ENST00000476994 IGHV4-30-4P0DP06 118 aa12.97□□□□□ -0.33
SREBF1-211ENST00000476994 CSN1S1P47710 185 aa12.97□□□□□ -0.33
SREBF1-211ENST00000476994 C9orf47Q6ZRZ4 202 aa12.97□□□□□ -0.33
SREBF1-211ENST00000476994 GOLT1AQ6ZVE7 132 aa12.97□□□□□ -0.33
SREBF1-211ENST00000476994 TRPT1Q86TN4 253 aaKnown RBP12.97□□□□□ -0.33
SREBF1-211ENST00000476994 HIST1H2BAQ96A08 127 aa12.97□□□□□ -0.33
SREBF1-211ENST00000476994 CLUHP3Q96NS8 147 aa12.97□□□□□ -0.33
SREBF1-211ENST00000476994 VGLL1Q99990 258 aa12.97□□□□□ -0.33
SREBF1-211ENST00000476994 HUWE1Q7Z6Z7 4374 aaKnown RBP12.97□□□□□ -0.33
SREBF1-211ENST00000476994 LINC00862A6NCI5 91 aa12.96□□□□□ -0.33
SREBF1-211ENST00000476994 C9JQL5 133 aa12.96□□□□□ -0.33
SREBF1-211ENST00000476994 CNN1P51911 297 aaKnown RBP12.96□□□□□ -0.33
SREBF1-211ENST00000476994 ACTL10Q5JWF8 245 aa12.96□□□□□ -0.33
SREBF1-211ENST00000476994 AMTNQ6UX39 209 aa12.96□□□□□ -0.33
SREBF1-211ENST00000476994 CYB561D1Q8N8Q1 229 aa12.96□□□□□ -0.33
SREBF1-211ENST00000476994 TM2D3Q9BRN9 247 aa12.96□□□□□ -0.33
SREBF1-211ENST00000476994 AGPAT4-IT1Q9H0P7 198 aa12.96□□□□□ -0.33
SREBF1-211ENST00000476994 RPH3ALQ9UNE2 315 aa12.96□□□□□ -0.33
SREBF1-211ENST00000476994 SERTM2A0A1B0GWG4 89 aa12.95□□□□□ -0.34
SREBF1-211ENST00000476994 A8MZ25 164 aa12.95□□□□□ -0.34
SREBF1-211ENST00000476994 HIST1H1AQ02539 215 aaPredicted RBP12.95□□□□□ -0.34
SREBF1-211ENST00000476994 ERCC8Q13216 396 aa12.95□□□□□ -0.34
SREBF1-211ENST00000476994 EBLN2Q6P2I7 272 aa12.95□□□□□ -0.34
SREBF1-211ENST00000476994 FAM19A4Q96LR4 140 aa12.95□□□□□ -0.34
SREBF1-211ENST00000476994 LINC00479Q96M42 142 aa12.95□□□□□ -0.34
SREBF1-211ENST00000476994 SPATA25Q9BR10 227 aa12.95□□□□□ -0.34
SREBF1-211ENST00000476994 TUBA4BQ9H853 241 aa12.95□□□□□ -0.34
SREBF1-211ENST00000476994 SRD5A3Q9H8P0 318 aa12.95□□□□□ -0.34
SREBF1-211ENST00000476994 KLF12Q9Y4X4 402 aa12.95□□□□□ -0.34
SREBF1-211ENST00000476994 TRAV8-1A0A0A6YYK1 113 aa12.94□□□□□ -0.34
SREBF1-211ENST00000476994 RAB19A4D1S5 217 aa12.94□□□□□ -0.34
SREBF1-211ENST00000476994 F6UZH7 168 aa12.94□□□□□ -0.34
SREBF1-211ENST00000476994 PDE6DO43924 150 aa12.94□□□□□ -0.34
SREBF1-211ENST00000476994 SRP19P09132 144 aaKnown RBP12.94□□□□□ -0.34
SREBF1-211ENST00000476994 LINC00322Q6ZN03 302 aaPredicted RBP12.94□□□□□ -0.34
SREBF1-211ENST00000476994 TMEM75Q8N9X5 138 aa12.94□□□□□ -0.34
SREBF1-211ENST00000476994 PPP1R14DQ9NXH3 145 aa12.94□□□□□ -0.34
SREBF1-211ENST00000476994 TMEM250H0YL14 139 aa12.93□□□□□ -0.34
SREBF1-211ENST00000476994 DUSP14O95147 198 aaKnown RBP12.93□□□□□ -0.34
SREBF1-211ENST00000476994 CT45A10P0DMU9 189 aa12.93□□□□□ -0.34
SREBF1-211ENST00000476994 OR10J6PQ8NGY7 276 aa12.93□□□□□ -0.34
SREBF1-211ENST00000476994 DERL1Q9BUN8 251 aa12.93□□□□□ -0.34
SREBF1-211ENST00000476994 EIF5A2Q9GZV4 153 aaKnown RBP12.93□□□□□ -0.34
SREBF1-211ENST00000476994 TRAV34A0A0B4J273 112 aa12.92□□□□□ -0.34
SREBF1-211ENST00000476994 TRBV6-1A0A0K0K1D8 114 aa12.92□□□□□ -0.34
SREBF1-211ENST00000476994 TMEM183BQ1AE95 376 aa12.92□□□□□ -0.34
SREBF1-211ENST00000476994 STHQ8IWL8 128 aa12.92□□□□□ -0.34
SREBF1-211ENST00000476994 Q8TAT8 98 aa12.92□□□□□ -0.34
SREBF1-211ENST00000476994 TVP23CQ96ET8 276 aa12.92□□□□□ -0.34
SREBF1-211ENST00000476994 LINC00477Q96M19 166 aa12.92□□□□□ -0.34
SREBF1-211ENST00000476994 ODF3Q96PU9 254 aa12.92□□□□□ -0.34
SREBF1-211ENST00000476994 SMDT1Q9H4I9 107 aa12.92□□□□□ -0.34
SREBF1-211ENST00000476994 ZNF492Q9P255 531 aa12.92□□□□□ -0.34
SREBF1-211ENST00000476994 GIG44P09565 113 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-211ENST00000476994 AKR1C3P42330 323 aa12.91□□□□□ -0.34
SREBF1-211ENST00000476994 Q86TA4 180 aa12.91□□□□□ -0.34
SREBF1-211ENST00000476994 EIF4E3Q8N5X7 224 aaKnown RBP12.91□□□□□ -0.34
SREBF1-211ENST00000476994 SGK494Q96LW2 274 aa12.91□□□□□ -0.34
SREBF1-211ENST00000476994 PSG8Q9UQ74 426 aa12.91□□□□□ -0.34
SREBF1-211ENST00000476994 IGKV3-20P01619 116 aa12.9□□□□□ -0.34
SREBF1-211ENST00000476994 ZNF138P52744 262 aa12.9□□□□□ -0.34
SREBF1-211ENST00000476994 FLI1Q01543 452 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-211ENST00000476994 PEA15Q15121 130 aa12.9□□□□□ -0.34
SREBF1-211ENST00000476994 ZFAND6Q6FIF0 208 aa12.9□□□□□ -0.34
SREBF1-211ENST00000476994 COMMD7Q86VX2 200 aa12.9□□□□□ -0.34
SREBF1-211ENST00000476994 OR4B1Q8NGF8 309 aa12.9□□□□□ -0.34
SREBF1-211ENST00000476994 IGF2BP2-AS1Q96M15 143 aa12.9□□□□□ -0.34
SREBF1-211ENST00000476994 SLC35B3Q9H1N7 401 aa12.9□□□□□ -0.34
SREBF1-211ENST00000476994 TRBV20OR9-2A0A075B6H5 130 aa12.89□□□□□ -0.35
SREBF1-211ENST00000476994 TRBV7-9A0A0J9YWB2 115 aa12.89□□□□□ -0.35
SREBF1-211ENST00000476994 FBLL1A6NHQ2 334 aaKnown RBP12.89□□□□□ -0.35
SREBF1-211ENST00000476994 K7EQM0 130 aa12.89□□□□□ -0.35
SREBF1-211ENST00000476994 CRISP2P16562 243 aa12.89□□□□□ -0.35
SREBF1-211ENST00000476994 RPL35AP18077 110 aaKnown RBP12.89□□□□□ -0.35
SREBF1-211ENST00000476994 RPL35P42766 123 aaKnown RBP12.89□□□□□ -0.35
SREBF1-211ENST00000476994 TMEM78Q5T7P6 136 aa12.89□□□□□ -0.35
SREBF1-211ENST00000476994 ZFAND2AQ8N6M9 145 aa12.89□□□□□ -0.35
SREBF1-211ENST00000476994 FMC1Q96HJ9 113 aa12.89□□□□□ -0.35
SREBF1-211ENST00000476994 LENEPQ9Y5L5 61 aa12.89□□□□□ -0.35
SREBF1-211ENST00000476994 DNAH7Q8WXX0 4024 aa12.89□□□□□ -0.35
SREBF1-211ENST00000476994 LCE6AA0A183 80 aa12.88□□□□□ -0.35
SREBF1-211ENST00000476994 CRXO43186 299 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-211ENST00000476994 LTAP01374 205 aa12.88□□□□□ -0.35
SREBF1-211ENST00000476994 KIR3DS1Q14943 382 aa12.88□□□□□ -0.35
SREBF1-211ENST00000476994 PRR9Q5T870 116 aa12.88□□□□□ -0.35
SREBF1-211ENST00000476994 PARLQ9H300 379 aa12.88□□□□□ -0.35
SREBF1-211ENST00000476994 TENM2Q9NT68 2774 aa12.87□□□□□ -0.35
SREBF1-211ENST00000476994 LOC102724200A0A096LPH7 203 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-211ENST00000476994 KLLNB2CW77 178 aa12.87□□□□□ -0.35
SREBF1-211ENST00000476994 IGLV2-8P01709 118 aa12.87□□□□□ -0.35
SREBF1-211ENST00000476994 S100A9P06702 114 aaKnown RBP12.87□□□□□ -0.35
SREBF1-211ENST00000476994 TAS2R60P59551 318 aa12.87□□□□□ -0.35
SREBF1-211ENST00000476994 UQCC3Q6UW78 93 aa12.87□□□□□ -0.35
SREBF1-211ENST00000476994 COX8CQ7Z4L0 72 aa12.87□□□□□ -0.35
SREBF1-211ENST00000476994 PRNTQ86SH4 94 aa12.87□□□□□ -0.35
SREBF1-211ENST00000476994 IL17DQ8TAD2 202 aa12.87□□□□□ -0.35
SREBF1-211ENST00000476994 EDA2RQ9HAV5 297 aa12.87□□□□□ -0.35
SREBF1-211ENST00000476994 KIR2DL5BA0A0G2JN68 375 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms