RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 TMEM78Q5T7P6 136 aa12.84□□□□□ -0.35
SMIM4-202ENST00000476842 FAM19A4Q96LR4 140 aa12.84□□□□□ -0.35
SMIM4-202ENST00000476842 VGLL1Q99990 258 aa12.84□□□□□ -0.35
SMIM4-202ENST00000476842 TMEM208Q9BTX3 173 aa12.84□□□□□ -0.35
SMIM4-202ENST00000476842 CMTM2Q8TAZ6 248 aa12.83□□□□□ -0.36
SMIM4-202ENST00000476842 C20orf144Q9BQM9 153 aa12.83□□□□□ -0.36
SMIM4-202ENST00000476842 HBE1P02100 147 aa12.82□□□□□ -0.36
SMIM4-202ENST00000476842 NMBP08949 121 aa12.82□□□□□ -0.36
SMIM4-202ENST00000476842 ZNF138P52744 262 aa12.82□□□□□ -0.36
SMIM4-202ENST00000476842 KIR3DS1Q14943 382 aa12.82□□□□□ -0.36
SMIM4-202ENST00000476842 ZFP69Q49AA0 526 aa12.82□□□□□ -0.36
SMIM4-202ENST00000476842 CASC10Q5T4H9 136 aa12.82□□□□□ -0.36
SMIM4-202ENST00000476842 DPPA3Q6W0C5 159 aa12.82□□□□□ -0.36
SMIM4-202ENST00000476842 TMEM256Q8N2U0 113 aa12.82□□□□□ -0.36
SMIM4-202ENST00000476842 ZNF492Q9P255 531 aa12.82□□□□□ -0.36
SMIM4-202ENST00000476842 TRBV7-9A0A0J9YWB2 115 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 A0A1W2PRE2 83 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 TMEM189A5PLL7 270 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 MAP1LC3B2A6NCE7 125 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 CRISP2P16562 243 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 FHITP49789 147 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 RRN3P1Q2M238 152 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 GFI1BQ5VTD9 330 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 ZFAND6Q6FIF0 208 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 EIF5AL1Q6IS14 154 aaKnown RBP12.81□□□□□ -0.36
SMIM4-202ENST00000476842 SLC51BQ86UW2 128 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 IQCF2Q8IXL9 164 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 C9orf62Q8N4C0 152 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 C11orf45Q8TAV5 145 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 TMED6Q8WW62 240 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 MBD3L1Q8WWY6 194 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 LINC01587Q99440 93 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 MAP1LC3BQ9GZQ8 125 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 TMPRSS5Q9H3S3 457 aa12.81□□□□□ -0.36
SMIM4-202ENST00000476842 FGF8P55075 233 aaPredicted RBP12.8□□□□□ -0.36
SMIM4-202ENST00000476842 SUMO1P63165 101 aaKnown RBP12.8□□□□□ -0.36
SMIM4-202ENST00000476842 KLLNB2CW77 178 aa12.79□□□□□ -0.36
SMIM4-202ENST00000476842 H7BYZ3 331 aa12.79□□□□□ -0.36
SMIM4-202ENST00000476842 TAS2R60P59551 318 aa12.79□□□□□ -0.36
SMIM4-202ENST00000476842 C5orf17Q8NAS9 161 aa12.79□□□□□ -0.36
SMIM4-202ENST00000476842 FAM213BQ8TBF2 198 aa12.79□□□□□ -0.36
SMIM4-202ENST00000476842 LENEPQ9Y5L5 61 aa12.79□□□□□ -0.36
SMIM4-202ENST00000476842 LOC102723971A0A1B0GUV8 181 aa12.78□□□□□ -0.36
SMIM4-202ENST00000476842 SERTM2A0A1B0GWG4 89 aa12.78□□□□□ -0.36
SMIM4-202ENST00000476842 CXorf65A6NEN9 183 aa12.78□□□□□ -0.36
SMIM4-202ENST00000476842 ZNF705GA8MUZ8 300 aaPredicted RBP12.78□□□□□ -0.36
SMIM4-202ENST00000476842 J3KRW8 73 aa12.78□□□□□ -0.36
SMIM4-202ENST00000476842 GPX1P07203 203 aa12.78□□□□□ -0.36
SMIM4-202ENST00000476842 RAB5CP51148 216 aa12.78□□□□□ -0.36
SMIM4-202ENST00000476842 NANOS2P60321 138 aaKnown RBP12.78□□□□□ -0.36
SMIM4-202ENST00000476842 GOLT1AQ6ZVE7 132 aa12.78□□□□□ -0.36
SMIM4-202ENST00000476842 ZFAND2AQ8N6M9 145 aa12.78□□□□□ -0.36
SMIM4-202ENST00000476842 SFT2D1Q8WV19 159 aa12.78□□□□□ -0.36
SMIM4-202ENST00000476842 NKX6-2Q9C056 277 aaPredicted RBP12.78□□□□□ -0.36
SMIM4-202ENST00000476842 EPDR1Q9UM22 224 aa12.78□□□□□ -0.36
SMIM4-202ENST00000476842 RPH3ALQ9UNE2 315 aa12.78□□□□□ -0.36
SMIM4-202ENST00000476842 TRAV12-3A0A0B4J271 114 aa12.77□□□□□ -0.37
SMIM4-202ENST00000476842 C7orf71A4D174 169 aa12.77□□□□□ -0.37
SMIM4-202ENST00000476842 GGTLC3B5MD39 225 aa12.77□□□□□ -0.37
SMIM4-202ENST00000476842 ZNF324O75467 553 aaPredicted RBP12.77□□□□□ -0.37
SMIM4-202ENST00000476842 PRM2P04554 102 aa12.77□□□□□ -0.37
SMIM4-202ENST00000476842 RNASE4P34096 147 aaKnown RBP12.77□□□□□ -0.37
SMIM4-202ENST00000476842 NIPSNAP3BQ9BS92 247 aa12.77□□□□□ -0.37
SMIM4-202ENST00000476842 YTHDF2Q9Y5A9 579 aaKnown RBP12.77□□□□□ -0.37
SMIM4-202ENST00000476842 TCRAP04437 139 aa12.76□□□□□ -0.37
SMIM4-202ENST00000476842 H2AFB1P0C5Y9 115 aa12.76□□□□□ -0.37
SMIM4-202ENST00000476842 AZU1P20160 251 aa12.76□□□□□ -0.37
SMIM4-202ENST00000476842 EMP1P54849 157 aa12.76□□□□□ -0.37
SMIM4-202ENST00000476842 GNG5P63218 68 aa12.76□□□□□ -0.37
SMIM4-202ENST00000476842 Q8TAT8 98 aa12.76□□□□□ -0.37
SMIM4-202ENST00000476842 CSMD3Q7Z407 3707 aa12.76□□□□□ -0.37
SMIM4-202ENST00000476842 STARD9Q9P2P6 4700 aa12.76□□□□□ -0.37
SMIM4-202ENST00000476842 FAM74A7A6NL05 159 aa12.75□□□□□ -0.37
SMIM4-202ENST00000476842 SPART-AS1P0CW21 52 aa12.75□□□□□ -0.37
SMIM4-202ENST00000476842 SULT1A2P50226 295 aa12.75□□□□□ -0.37
SMIM4-202ENST00000476842 UBE2G2P60604 165 aa12.75□□□□□ -0.37
SMIM4-202ENST00000476842 BTN1A1Q13410 526 aa12.75□□□□□ -0.37
SMIM4-202ENST00000476842 PMS2P11Q13670 270 aa12.75□□□□□ -0.37
SMIM4-202ENST00000476842 ZNF493Q6ZR52 646 aa12.75□□□□□ -0.37
SMIM4-202ENST00000476842 CELA1Q9UNI1 258 aa12.75□□□□□ -0.37
SMIM4-202ENST00000476842 K7EQM0 130 aa12.74□□□□□ -0.37
SMIM4-202ENST00000476842 HTN1P15515 57 aa12.74□□□□□ -0.37
SMIM4-202ENST00000476842 CEMP1Q6PRD7 247 aaPredicted RBP12.74□□□□□ -0.37
SMIM4-202ENST00000476842 PHLDA1Q8WV24 401 aaPredicted RBP12.74□□□□□ -0.37
SMIM4-202ENST00000476842 PYGO2Q9BRQ0 406 aa12.74□□□□□ -0.37
SMIM4-202ENST00000476842 LINC00467Q9BRT7 94 aa12.74□□□□□ -0.37
SMIM4-202ENST00000476842 DKK2Q9UBU2 259 aa12.74□□□□□ -0.37
SMIM4-202ENST00000476842 ARL2-SNX15V9GYD0 113 aa12.74□□□□□ -0.37
SMIM4-202ENST00000476842 TRAV8-1A0A0A6YYK1 113 aa12.73□□□□□ -0.37
SMIM4-202ENST00000476842 TEX48A0A1B0GUV7 120 aa12.73□□□□□ -0.37
SMIM4-202ENST00000476842 IFNA7P01567 189 aa12.73□□□□□ -0.37
SMIM4-202ENST00000476842 C12orf74Q32Q52 190 aa12.73□□□□□ -0.37
SMIM4-202ENST00000476842 PRR9Q5T870 116 aa12.73□□□□□ -0.37
SMIM4-202ENST00000476842 CCDC28AQ8IWP9 274 aa12.73□□□□□ -0.37
SMIM4-202ENST00000476842 CYB561D1Q8N8Q1 229 aa12.73□□□□□ -0.37
SMIM4-202ENST00000476842 C16orf74Q96GX8 76 aa12.73□□□□□ -0.37
SMIM4-202ENST00000476842 ATG101Q9BSB4 218 aa12.73□□□□□ -0.37
SMIM4-202ENST00000476842 DYNC2H1Q8NCM8 4307 aaKnown RBP12.72□□□□□ -0.37
SMIM4-202ENST00000476842 TRAV1-1A0A0B4J248 108 aa12.72□□□□□ -0.37
SMIM4-202ENST00000476842 PLAC8L1A1L4L8 177 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms