RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 LEPP41159 167 aa9.64□□□□□ -0.87
HLA-DPA1-246ENST00000476642 CDKN1BP46527 198 aa9.64□□□□□ -0.87
HLA-DPA1-246ENST00000476642 SULT1A2P50226 295 aa9.64□□□□□ -0.87
HLA-DPA1-246ENST00000476642 AMTNQ6UX39 209 aa9.64□□□□□ -0.87
HLA-DPA1-246ENST00000476642 C9orf47Q6ZRZ4 202 aa9.64□□□□□ -0.87
HLA-DPA1-246ENST00000476642 COMMD7Q86VX2 200 aa9.64□□□□□ -0.87
HLA-DPA1-246ENST00000476642 C5orf17Q8NAS9 161 aa9.64□□□□□ -0.87
HLA-DPA1-246ENST00000476642 OR11H2Q8NH07 326 aa9.64□□□□□ -0.87
HLA-DPA1-246ENST00000476642 SFT2D1Q8WV19 159 aa9.64□□□□□ -0.87
HLA-DPA1-246ENST00000476642 IGF2BP2-AS1Q96M15 143 aa9.64□□□□□ -0.87
HLA-DPA1-246ENST00000476642 SLC35B3Q9H1N7 401 aa9.64□□□□□ -0.87
HLA-DPA1-246ENST00000476642 ARL2-SNX15V9GYD0 113 aa9.64□□□□□ -0.87
HLA-DPA1-246ENST00000476642 TRBV7-9A0A0J9YWB2 115 aa9.63□□□□□ -0.87
HLA-DPA1-246ENST00000476642 FBLL1A6NHQ2 334 aaKnown RBP9.63□□□□□ -0.87
HLA-DPA1-246ENST00000476642 PRAC2D3DTV9 90 aa9.63□□□□□ -0.87
HLA-DPA1-246ENST00000476642 INSP01308 110 aa9.63□□□□□ -0.87
HLA-DPA1-246ENST00000476642 GIG44P09565 113 aaPredicted RBP9.63□□□□□ -0.87
HLA-DPA1-246ENST00000476642 MIFP14174 115 aa9.63□□□□□ -0.87
HLA-DPA1-246ENST00000476642 SSX7Q7RTT5 188 aa9.63□□□□□ -0.87
HLA-DPA1-246ENST00000476642 C20orf144Q9BQM9 153 aa9.63□□□□□ -0.87
HLA-DPA1-246ENST00000476642 RETNQ9HD89 108 aa9.63□□□□□ -0.87
HLA-DPA1-246ENST00000476642 RYR3Q15413 4870 aa9.62□□□□□ -0.87
HLA-DPA1-246ENST00000476642 SMIM9A6NGZ8 99 aa9.62□□□□□ -0.87
HLA-DPA1-246ENST00000476642 ZNF705EA8MWA4 302 aaPredicted RBP9.62□□□□□ -0.87
HLA-DPA1-246ENST00000476642 DIRC3C9JPN6 131 aa9.62□□□□□ -0.87
HLA-DPA1-246ENST00000476642 NMBP08949 121 aa9.62□□□□□ -0.87
HLA-DPA1-246ENST00000476642 FHITP49789 147 aa9.62□□□□□ -0.87
HLA-DPA1-246ENST00000476642 FGF8P55075 233 aaPredicted RBP9.62□□□□□ -0.87
HLA-DPA1-246ENST00000476642 SUMO1P63165 101 aaKnown RBP9.62□□□□□ -0.87
HLA-DPA1-246ENST00000476642 SPINK13Q1W4C9 94 aa9.62□□□□□ -0.87
HLA-DPA1-246ENST00000476642 CASC10Q5T4H9 136 aa9.62□□□□□ -0.87
HLA-DPA1-246ENST00000476642 TMEM256Q8N2U0 113 aa9.62□□□□□ -0.87
HLA-DPA1-246ENST00000476642 CSNK1G2-AS1Q8NCQ2 148 aa9.62□□□□□ -0.87
HLA-DPA1-246ENST00000476642 TCEAL7Q9BRU2 100 aa9.62□□□□□ -0.87
HLA-DPA1-246ENST00000476642 TMEM208Q9BTX3 173 aa9.62□□□□□ -0.87
HLA-DPA1-246ENST00000476642 LENEPQ9Y5L5 61 aa9.62□□□□□ -0.87
HLA-DPA1-246ENST00000476642 KRBOX1C9JBD0 128 aa9.61□□□□□ -0.87
HLA-DPA1-246ENST00000476642 F6UZH7 168 aa9.61□□□□□ -0.87
HLA-DPA1-246ENST00000476642 ZNF138P52744 262 aa9.61□□□□□ -0.87
HLA-DPA1-246ENST00000476642 FXYD7P58549 80 aa9.61□□□□□ -0.87
HLA-DPA1-246ENST00000476642 IL17DQ8TAD2 202 aa9.61□□□□□ -0.87
HLA-DPA1-246ENST00000476642 NEU1Q99519 415 aa9.61□□□□□ -0.87
HLA-DPA1-246ENST00000476642 IGKV2-40A0A087WW87 121 aaPredicted RBP9.6□□□□□ -0.87
HLA-DPA1-246ENST00000476642 TRAV1-1A0A0B4J248 108 aa9.6□□□□□ -0.87
HLA-DPA1-246ENST00000476642 M0R2Z0 102 aa9.6□□□□□ -0.87
HLA-DPA1-246ENST00000476642 IGKV2D-40P01614 121 aaPredicted RBP9.6□□□□□ -0.87
HLA-DPA1-246ENST00000476642 CT45A10P0DMU9 189 aa9.6□□□□□ -0.87
HLA-DPA1-246ENST00000476642 ZNF705AQ6ZN79 300 aaPredicted RBP9.6□□□□□ -0.87
HLA-DPA1-246ENST00000476642 HIST1H2BAQ96A08 127 aa9.6□□□□□ -0.87
HLA-DPA1-246ENST00000476642 AGPAT4-IT1Q9H0P7 198 aa9.6□□□□□ -0.87
HLA-DPA1-246ENST00000476642 TMPRSS5Q9H3S3 457 aa9.6□□□□□ -0.87
HLA-DPA1-246ENST00000476642 PLA2G2EQ9NZK7 142 aa9.6□□□□□ -0.87
HLA-DPA1-246ENST00000476642 ZNF492Q9P255 531 aa9.6□□□□□ -0.87
HLA-DPA1-246ENST00000476642 EPDR1Q9UM22 224 aa9.6□□□□□ -0.87
HLA-DPA1-246ENST00000476642 RPH3ALQ9UNE2 315 aa9.6□□□□□ -0.87
HLA-DPA1-246ENST00000476642 TMEM189A5PLL7 270 aa9.59□□□□□ -0.87
HLA-DPA1-246ENST00000476642 FAM74A7A6NL05 159 aa9.59□□□□□ -0.87
HLA-DPA1-246ENST00000476642 TCRAP04437 139 aa9.59□□□□□ -0.87
HLA-DPA1-246ENST00000476642 CRISP2P16562 243 aa9.59□□□□□ -0.87
HLA-DPA1-246ENST00000476642 UBE2G2P60604 165 aa9.59□□□□□ -0.87
HLA-DPA1-246ENST00000476642 BLOC1S1P78537 153 aa9.59□□□□□ -0.87
HLA-DPA1-246ENST00000476642 CYB561D1Q8N8Q1 229 aa9.59□□□□□ -0.87
HLA-DPA1-246ENST00000476642 VGLL1Q99990 258 aa9.59□□□□□ -0.87
HLA-DPA1-246ENST00000476642 TXNDC17Q9BRA2 123 aa9.59□□□□□ -0.87
HLA-DPA1-246ENST00000476642 NIPSNAP3BQ9BS92 247 aa9.59□□□□□ -0.87
HLA-DPA1-246ENST00000476642 ATG101Q9BSB4 218 aa9.59□□□□□ -0.87
HLA-DPA1-246ENST00000476642 NDFIP1Q9BT67 221 aa9.59□□□□□ -0.87
HLA-DPA1-246ENST00000476642 C11orf68Q9H3H3 251 aaKnown RBP9.59□□□□□ -0.87
HLA-DPA1-246ENST00000476642 MANBALQ9NQG1 85 aa9.59□□□□□ -0.87
HLA-DPA1-246ENST00000476642 IGHV3OR16-12A0A075B7B8 117 aa9.58□□□□□ -0.88
HLA-DPA1-246ENST00000476642 GGTLC3B5MD39 225 aa9.58□□□□□ -0.88
HLA-DPA1-246ENST00000476642 H7BYZ3 331 aa9.58□□□□□ -0.88
HLA-DPA1-246ENST00000476642 CRXO43186 299 aaPredicted RBP9.58□□□□□ -0.88
HLA-DPA1-246ENST00000476642 IFNA1P01562 189 aa9.58□□□□□ -0.88
HLA-DPA1-246ENST00000476642 GPX1P07203 203 aa9.58□□□□□ -0.88
HLA-DPA1-246ENST00000476642 ERCC8Q13216 396 aa9.58□□□□□ -0.88
HLA-DPA1-246ENST00000476642 RRN3P1Q2M238 152 aa9.58□□□□□ -0.88
HLA-DPA1-246ENST00000476642 CST9LP1Q5W188 147 aa9.58□□□□□ -0.88
HLA-DPA1-246ENST00000476642 GOLT1AQ6ZVE7 132 aa9.58□□□□□ -0.88
HLA-DPA1-246ENST00000476642 EDA2RQ9HAV5 297 aa9.58□□□□□ -0.88
HLA-DPA1-246ENST00000476642 TRAV12-2A0A075B6T6 113 aa9.57□□□□□ -0.88
HLA-DPA1-246ENST00000476642 TAGLN2P37802 199 aaKnown RBP9.57□□□□□ -0.88
HLA-DPA1-246ENST00000476642 ALKAL2Q6UX46 152 aa9.57□□□□□ -0.88
HLA-DPA1-246ENST00000476642 C1orf158Q8N1D5 194 aa9.57□□□□□ -0.88
HLA-DPA1-246ENST00000476642 TMEM75Q8N9X5 138 aa9.57□□□□□ -0.88
HLA-DPA1-246ENST00000476642 FAM19A4Q96LR4 140 aa9.57□□□□□ -0.88
HLA-DPA1-246ENST00000476642 LINC01587Q99440 93 aa9.57□□□□□ -0.88
HLA-DPA1-246ENST00000476642 YTHDF2Q9Y5A9 579 aaKnown RBP9.57□□□□□ -0.88
HLA-DPA1-246ENST00000476642 X6R8D5 127 aa9.57□□□□□ -0.88
HLA-DPA1-246ENST00000476642 A0A0J9YWU9 116 aa9.56□□□□□ -0.88
HLA-DPA1-246ENST00000476642 TEX48A0A1B0GUV7 120 aa9.56□□□□□ -0.88
HLA-DPA1-246ENST00000476642 A0A1B0GV50 99 aa9.56□□□□□ -0.88
HLA-DPA1-246ENST00000476642 C7orf71A4D174 169 aa9.56□□□□□ -0.88
HLA-DPA1-246ENST00000476642 KLLNB2CW77 178 aa9.56□□□□□ -0.88
HLA-DPA1-246ENST00000476642 PEX7O00628 323 aa9.56□□□□□ -0.88
HLA-DPA1-246ENST00000476642 PAGE4O60829 102 aa9.56□□□□□ -0.88
HLA-DPA1-246ENST00000476642 PRB4P10163 310 aaPredicted RBP9.56□□□□□ -0.88
HLA-DPA1-246ENST00000476642 TAS2R60P59551 318 aa9.56□□□□□ -0.88
HLA-DPA1-246ENST00000476642 GNG5P63218 68 aa9.56□□□□□ -0.88
HLA-DPA1-246ENST00000476642 PMS2P11Q13670 270 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms