RNA–Protein interactions for RNA: ENST00000476635.5

PRKCI-202, Transcript of protein kinase C iota, humanhuman

TSL 1 (best)

Gene PRKCI, Length 3,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCI-202ENST00000476635 C5orf52A6NGY3 159 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 FAM162BQ5T6X4 162 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 AMTNQ6UX39 209 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 FOXI2Q6ZQN5 318 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 GBGT1Q8N5D6 347 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 NDUFAF3Q9BU61 184 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 AGPAT4-IT1Q9H0P7 198 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 MS4A6AQ9H2W1 248 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 ZNF256Q9Y2P7 627 aaPredicted RBP4.82□□□□□ -1.64
PRKCI-202ENST00000476635 U3KQK5 164 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 C1orf196B1AJZ1 125 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 DEFB114Q30KQ6 69 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 BEAN1Q3B7T3 259 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 TCF24Q7RTU0 167 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 FAM24BQ8N5W8 94 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 SPAG8Q99932 426 aaPredicted RBP4.82□□□□□ -1.64
PRKCI-202ENST00000476635 MXRA5Q9NR99 2828 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 A0A0J9YX75 114 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 A8MWL6 223 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 IGHV3-11P01762 117 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 CT45A10P0DMU9 189 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 CD28P10747 220 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 TMEM136Q6ZRR5 245 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 GTSF1Q8WW33 167 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 VGLL1Q99990 258 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 EDA2RQ9HAV5 297 aa4.82□□□□□ -1.64
PRKCI-202ENST00000476635 CUBNO60494 3623 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 PRAC2D3DTV9 90 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 GATCO43716 136 aaKnown RBP4.81□□□□□ -1.64
PRKCI-202ENST00000476635 Q0VG73 95 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 OR8A1Q8NGG7 326 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 RNF114Q9Y508 228 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 HELZ2Q9BYK8 2649 aaKnown RBP4.81□□□□□ -1.64
PRKCI-202ENST00000476635 M0R3E3 92 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 IGLV1-51P01701 117 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 SMUG1Q53HV7 270 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 RBPMS2Q6ZRY4 209 aaKnown RBP4.81□□□□□ -1.64
PRKCI-202ENST00000476635 LCNL1Q6ZST4 164 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 C18orf65Q6ZTR6 163 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 NUP35Q8NFH5 326 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 SMR3AQ99954 134 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 TRAV34A0A0B4J273 112 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 A0A1W2PPQ1 181 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 SH2D1AO60880 128 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 DUSP14O95147 198 aaKnown RBP4.81□□□□□ -1.64
PRKCI-202ENST00000476635 OR5AL1P0C617 328 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 LEPP41159 167 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 ERVFC1-1P60608 527 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 LINC00482Q8N8I6 264 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 OR11H1Q8NG94 326 aa4.81□□□□□ -1.64
PRKCI-202ENST00000476635 DLX4Q92988 240 aaPredicted RBP4.81□□□□□ -1.64
PRKCI-202ENST00000476635 RNASE7Q9H1E1 156 aaKnown RBP4.81□□□□□ -1.64
PRKCI-202ENST00000476635 DOPEY2Q9Y3R5 2298 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 CCL24O00175 119 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 HLA-DQA1P01909 254 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 HLA-DRB4P13762 266 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 ZNF80P51504 273 aaPredicted RBP4.8□□□□□ -1.64
PRKCI-202ENST00000476635 NHLRC2Q8NBF2 726 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 NDFIP1Q9BT67 221 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 HLA-DRB4X5D2U9 266 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 IGKV2-40A0A087WW87 121 aaPredicted RBP4.8□□□□□ -1.64
PRKCI-202ENST00000476635 FABP5P3A8MUU1 101 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 INAFM1C9JVW0 142 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 ZNF324O75467 553 aaPredicted RBP4.8□□□□□ -1.64
PRKCI-202ENST00000476635 IGKV2D-40P01614 121 aaPredicted RBP4.8□□□□□ -1.64
PRKCI-202ENST00000476635 P01737 135 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 HLA-DMBP28068 263 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 INSL3P51460 131 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 SLURP1P55000 103 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 WFDC9Q8NEX5 89 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 C16orf92Q96LL3 132 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 C8orf49Q96NF6 230 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 CSMD1Q96PZ7 3565 aa4.8□□□□□ -1.64
PRKCI-202ENST00000476635 F2Z2F3 143 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 AMBPP02760 352 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 EDN2P20800 178 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 OR10J3Q5JRS4 329 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 PRNTQ86SH4 94 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 KLHL30-AS1Q8NEE0 82 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 IL17DQ8TAD2 202 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 NEU1Q99519 415 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 C19orf73Q9NVV2 129 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 TEX15Q9BXT5 2789 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 HIST1H2BKO60814 126 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 HIST1H2BJP06899 126 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 HOXA5P20719 270 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 HIST1H2BOP23527 126 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 HIST1H2BBP33778 126 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 SYNJ2BPP57105 145 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 HIST1H2BDP58876 126 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 HIST1H2BCP62807 126 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 HIST2H2BEQ16778 126 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.79□□□□□ -1.64
PRKCI-202ENST00000476635 HIST1H2BHQ93079 126 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 HIST1H2BNQ99877 126 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 HIST1H2BMQ99879 126 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 CITED2Q99967 270 aaPredicted RBP4.79□□□□□ -1.64
PRKCI-202ENST00000476635 GPR61Q9BZJ8 451 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 TRAV8-1A0A0A6YYK1 113 aa4.79□□□□□ -1.64
PRKCI-202ENST00000476635 XKRY2A2RUG3 117 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms